Definition | Borrelia burgdorferi B31 plasmid lp28-2, complete sequence. |
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Accession | NC_001852 |
Length | 29,766 |
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The map label for this gene is 11496691
Identifier: 11496691
GI number: 11496691
Start: 11501
End: 12355
Strand: Reverse
Name: 11496691
Synonym: BBG13
Alternate gene names: NA
Gene position: 12355-11501 (Counterclockwise)
Preceding gene: 11496676
Following gene: 11496690
Centisome position: 41.51
GC content: 34.74
Gene sequence:
>855_bases ATGGCGCTGATTACATTAATTGTCGTGGAGGTAAAAATGGCAATTGAAAAATTGAGAATGCCGACTGGCGCAGTGCTAGT TACGGTCAATATTGAAAAATTCAAGTGGAATTTCAAGGGTTCAGACATTAAAAATAATAATGAACCTTCTGGAACAGATC CTACTAATTTAGTTGTAAAAGATTTGGGCTCAAACATAACAAAGCCTACCAAATGGAAGTCAATTAGCGAATGCATTTTT AGGGTTAAAAAGATTGATTCTAAGTCAAAACTTACATCAGATTTAGATCTAAAAGAAGGTAGTATTTTCTACTATAACAA AGATCTTTTGACAAAAATATCTACTGCATGTGATAATGCTGATGAAATTGATGTTCTACTTTTCAAAACATATTGCTTAG GGTATTCATATACCATCAGCTCAACAAAAGCTACAGAAACTCTAAAAACAACTTGCGGATCAATCTCGGCAATTGGAAAA ATACCAGAGCAAACTGTTGAGTTTAGCGGGTACTCCGTTAGAGAAACCGCAACTAATAAGGAAGAAATCCTAGATACATA TATAGAAAAATCGCATTTCATAACACAAGATATTTCAAAAAATAATGACCAATGGCAAATTGGAAAACGCAGTTTGCCTA CAAATTACGAGTTCACGGTACTTTTTGTAGATCAAATTGCAGATCAAGATCAAAGAACCAAATTCATGGTGGGCGAAGGA CAAATTGCAACTTACAACCCAAGCCAGGACTTGAACAATCAAAAAATCGATCTAAAGTGCCAGCTTACTCTGACAAAACC CTTAGTATCCCTTTCATGCGACTATATTAAAGATGCAAGGTTCTTCAAGATTTAG
Upstream 100 bases:
>100_bases TCGTTGAAGTATTTTAGCATTGACGATTCCCAGGTTGAAGACGAAAATTCTGATGCAAGAATGGTAACATTGGTTGATTC AACATTGGGAATTAGGATAG
Downstream 100 bases:
>100_bases GAGGCAACAATGGTAATTAATGTTAATTTGACTGGCAGGGTAATGTTACCCTATATCCCAGACTATATTAGAAACGGCAA GGAAAAGATCAAAGAAGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MALITLIVVEVKMAIEKLRMPTGAVLVTVNIEKFKWNFKGSDIKNNNEPSGTDPTNLVVKDLGSNITKPTKWKSISECIF RVKKIDSKSKLTSDLDLKEGSIFYYNKDLLTKISTACDNADEIDVLLFKTYCLGYSYTISSTKATETLKTTCGSISAIGK IPEQTVEFSGYSVRETATNKEEILDTYIEKSHFITQDISKNNDQWQIGKRSLPTNYEFTVLFVDQIADQDQRTKFMVGEG QIATYNPSQDLNNQKIDLKCQLTLTKPLVSLSCDYIKDARFFKI
Sequences:
>Translated_284_residues MALITLIVVEVKMAIEKLRMPTGAVLVTVNIEKFKWNFKGSDIKNNNEPSGTDPTNLVVKDLGSNITKPTKWKSISECIF RVKKIDSKSKLTSDLDLKEGSIFYYNKDLLTKISTACDNADEIDVLLFKTYCLGYSYTISSTKATETLKTTCGSISAIGK IPEQTVEFSGYSVRETATNKEEILDTYIEKSHFITQDISKNNDQWQIGKRSLPTNYEFTVLFVDQIADQDQRTKFMVGEG QIATYNPSQDLNNQKIDLKCQLTLTKPLVSLSCDYIKDARFFKI >Mature_283_residues ALITLIVVEVKMAIEKLRMPTGAVLVTVNIEKFKWNFKGSDIKNNNEPSGTDPTNLVVKDLGSNITKPTKWKSISECIFR VKKIDSKSKLTSDLDLKEGSIFYYNKDLLTKISTACDNADEIDVLLFKTYCLGYSYTISSTKATETLKTTCGSISAIGKI PEQTVEFSGYSVRETATNKEEILDTYIEKSHFITQDISKNNDQWQIGKRSLPTNYEFTVLFVDQIADQDQRTKFMVGEGQ IATYNPSQDLNNQKIDLKCQLTLTKPLVSLSCDYIKDARFFKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32090; Mature: 31959
Theoretical pI: Translated: 7.73; Mature: 7.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALITLIVVEVKMAIEKLRMPTGAVLVTVNIEKFKWNFKGSDIKNNNEPSGTDPTNLVVK CCEEHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHH DLGSNITKPTKWKSISECIFRVKKIDSKSKLTSDLDLKEGSIFYYNKDLLTKISTACDNA HHCCCCCCCCCHHHHHHHHHHHHHCCCHHHCCCCCCCCCCEEEEECHHHHHHHHHHCCCC DEIDVLLFKTYCLGYSYTISSTKATETLKTTCGSISAIGKIPEQTVEFSGYSVRETATNK CCEEHEEEEHHHCCEEEEECCCHHHHHHHHHHCCHHHHHCCCCHHEECCCCEEECCCCCH EEILDTYIEKSHFITQDISKNNDQWQIGKRSLPTNYEFTVLFVDQIADQDQRTKFMVGEG HHHHHHHHHHHHHEEHHHCCCCCCEEECCCCCCCCCEEEEEEEEHHCCCCCCCEEEECCC QIATYNPSQDLNNQKIDLKCQLTLTKPLVSLSCDYIKDARFFKI EEEEECCCCCCCCCEEEEEEEEEEECCHHHHCCHHHCCCEEECC >Mature Secondary Structure ALITLIVVEVKMAIEKLRMPTGAVLVTVNIEKFKWNFKGSDIKNNNEPSGTDPTNLVVK CEEHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHH DLGSNITKPTKWKSISECIFRVKKIDSKSKLTSDLDLKEGSIFYYNKDLLTKISTACDNA HHCCCCCCCCCHHHHHHHHHHHHHCCCHHHCCCCCCCCCCEEEEECHHHHHHHHHHCCCC DEIDVLLFKTYCLGYSYTISSTKATETLKTTCGSISAIGKIPEQTVEFSGYSVRETATNK CCEEHEEEEHHHCCEEEEECCCHHHHHHHHHHCCHHHHHCCCCHHEECCCCEEECCCCCH EEILDTYIEKSHFITQDISKNNDQWQIGKRSLPTNYEFTVLFVDQIADQDQRTKFMVGEG HHHHHHHHHHHHHEEHHHCCCCCCEEECCCCCCCCCEEEEEEEEHHCCCCCCCEEEECCC QIATYNPSQDLNNQKIDLKCQLTLTKPLVSLSCDYIKDARFFKI EEEEECCCCCCCCCEEEEEEEEEEECCHHHHCCHHHCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA