Definition | Borrelia burgdorferi B31 plasmid lp28-2, complete sequence. |
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Accession | NC_001852 |
Length | 29,766 |
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The map label for this gene is dnaB [H]
Identifier: 11496674
GI number: 11496674
Start: 27113
End: 27940
Strand: Direct
Name: dnaB [H]
Synonym: BBG32
Alternate gene names: 11496674
Gene position: 27113-27940 (Clockwise)
Preceding gene: 11496673
Following gene: 11496675
Centisome position: 91.09
GC content: 34.3
Gene sequence:
>828_bases ATGAAAGTCGCTAGTCTTATAAGGTCAACTTGTGAAAATGAAAATTTAATTTTGCGGAGCGGATTTAGAGATCTTGATGC TATTATACAAGGCTTTAGGGAATCAAATTTTGTAGTAATTGGAGCACGGCCCAGTGTTGGTAAAACGGCTTTTGCCCTCA ATATTGCTCACAACATATGTTTAGAACAAAATTTGAGTGTTGGATGGTTTACATATGAAATGACAAGTAAAACTGTCACT CGGAGGCTTTTGTCGATGAATTCGGGCATAGAACATAATAAGTTGCTTGACAATATCAGTTCGCTAAATAAAAGTGAACT GGACGCTTACCATAAATCAGTTTCTGAGGTTAGTAATTTTTCTTTTTGGATTAATAGCGTTTGGGGTACTGACATACATG AGTTAGAAGATAAAGCTAGACAAATGAAATTGAACCACGATGTAAAAATTATCTTTATTGATTACATTAATTTGATTCCC GTGTCACAGAATAATATTCCTCGTTTTGAACAAGTTGCATTTTTGAGTCGTAATATACGTTCGCTTGCACTTGAACTTGG AATTCCAATAATAGTTGTATCTCAAGTTTCCAGAAGCGCTGAGGTTGTAGAACCTAGTTTGGCAACTTTGGGAGAATCGG CAGCATTACAATGGCATGCAGATATTGTAATTTTTTTACATCAAGAGAGGAAAAAACGTAAAGGGCGGAATACTTCTAAA GGTAATAATACAACTAAAGTAAAAGTGATAGTTGCTAAAAATAGAAACGGTTATATTGGGATTGCCAATTTAGGTTTTAC TCCAAAAACTATAAAATTTTCGAATTGA
Upstream 100 bases:
>100_bases GAAAAAGTTGGGCAAAGAGGATAATCCTAGTTTGCTTCGCAGTCTGCTACGTAGTCGACTGCGTAGATTTTGAATTTACA ATGTTACTAAAGGGTAAATT
Downstream 100 bases:
>100_bases AATTTAGATTTGTTAGATTGTTAGATTTTGTAAATATTCTGTTATTTGGCCTTAATTTGTGTTACAATGTATTTAGTAGG TGAGTAAATTATGAAATCAT
Product: replicative DNA helicase, putative
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MKVASLIRSTCENENLILRSGFRDLDAIIQGFRESNFVVIGARPSVGKTAFALNIAHNICLEQNLSVGWFTYEMTSKTVT RRLLSMNSGIEHNKLLDNISSLNKSELDAYHKSVSEVSNFSFWINSVWGTDIHELEDKARQMKLNHDVKIIFIDYINLIP VSQNNIPRFEQVAFLSRNIRSLALELGIPIIVVSQVSRSAEVVEPSLATLGESAALQWHADIVIFLHQERKKRKGRNTSK GNNTTKVKVIVAKNRNGYIGIANLGFTPKTIKFSN
Sequences:
>Translated_275_residues MKVASLIRSTCENENLILRSGFRDLDAIIQGFRESNFVVIGARPSVGKTAFALNIAHNICLEQNLSVGWFTYEMTSKTVT RRLLSMNSGIEHNKLLDNISSLNKSELDAYHKSVSEVSNFSFWINSVWGTDIHELEDKARQMKLNHDVKIIFIDYINLIP VSQNNIPRFEQVAFLSRNIRSLALELGIPIIVVSQVSRSAEVVEPSLATLGESAALQWHADIVIFLHQERKKRKGRNTSK GNNTTKVKVIVAKNRNGYIGIANLGFTPKTIKFSN >Mature_275_residues MKVASLIRSTCENENLILRSGFRDLDAIIQGFRESNFVVIGARPSVGKTAFALNIAHNICLEQNLSVGWFTYEMTSKTVT RRLLSMNSGIEHNKLLDNISSLNKSELDAYHKSVSEVSNFSFWINSVWGTDIHELEDKARQMKLNHDVKIIFIDYINLIP VSQNNIPRFEQVAFLSRNIRSLALELGIPIIVVSQVSRSAEVVEPSLATLGESAALQWHADIVIFLHQERKKRKGRNTSK GNNTTKVKVIVAKNRNGYIGIANLGFTPKTIKFSN
Specific function: Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity [H]
COG id: COG0305
COG function: function code L; Replicative DNA helicase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 SF4 helicase domain [H]
Homologues:
Organism=Escherichia coli, GI1790486, Length=261, Percent_Identity=28.3524904214559, Blast_Score=112, Evalue=3e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007692 - InterPro: IPR007694 - InterPro: IPR007693 - InterPro: IPR016136 [H]
Pfam domain/function: PF00772 DnaB; PF03796 DnaB_C [H]
EC number: =3.6.4.12 [H]
Molecular weight: Translated: 30913; Mature: 30913
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVASLIRSTCENENLILRSGFRDLDAIIQGFRESNFVVIGARPSVGKTAFALNIAHNIC CCHHHHHHHHCCCCCEEEECCCHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEHHHHHH LEQNLSVGWFTYEMTSKTVTRRLLSMNSGIEHNKLLDNISSLNKSELDAYHKSVSEVSNF HHCCCCEEEEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHH SFWINSVWGTDIHELEDKARQMKLNHDVKIIFIDYINLIPVSQNNIPRFEQVAFLSRNIR HEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHH SLALELGIPIIVVSQVSRSAEVVEPSLATLGESAALQWHADIVIFLHQERKKRKGRNTSK HHHHHHCCCEEEEECCCCCHHHCCCHHHHCCCCCEEEEECEEEEEEECHHHHHCCCCCCC GNNTTKVKVIVAKNRNGYIGIANLGFTPKTIKFSN CCCCEEEEEEEEECCCCEEEEEECCCCCCEEEECC >Mature Secondary Structure MKVASLIRSTCENENLILRSGFRDLDAIIQGFRESNFVVIGARPSVGKTAFALNIAHNIC CCHHHHHHHHCCCCCEEEECCCHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEHHHHHH LEQNLSVGWFTYEMTSKTVTRRLLSMNSGIEHNKLLDNISSLNKSELDAYHKSVSEVSNF HHCCCCEEEEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHH SFWINSVWGTDIHELEDKARQMKLNHDVKIIFIDYINLIPVSQNNIPRFEQVAFLSRNIR HEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHH SLALELGIPIIVVSQVSRSAEVVEPSLATLGESAALQWHADIVIFLHQERKKRKGRNTSK HHHHHHCCCEEEEECCCCCHHHCCCHHHHCCCCCEEEEECEEEEEEECHHHHHCCCCCCC GNNTTKVKVIVAKNRNGYIGIANLGFTPKTIKFSN CCCCEEEEEEEEECCCCEEEEEECCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9665876 [H]