Definition | Borrelia burgdorferi B31 plasmid lp28-2, complete sequence. |
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Accession | NC_001852 |
Length | 29,766 |
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The map label for this gene is 11496675
Identifier: 11496675
GI number: 11496675
Start: 28031
End: 28831
Strand: Direct
Name: 11496675
Synonym: BBG33
Alternate gene names: NA
Gene position: 28031-28831 (Clockwise)
Preceding gene: 11496674
Following gene: NA
Centisome position: 94.17
GC content: 29.34
Gene sequence:
>801_bases ATGAAATCATCAGTAGTGACAACAAGTATTACTGAAGAGCAAATATATAAAGAGTTTCTGCGACTAGGTATGGAACAACT AATAGCTCAAGATTTATCAAAAAGATATTATCACAATGAACTTACATATAGAGATTTAGAAAATTTAGAAAAGCAATTTG GCATAAAGTTTGACAATCTTGTTACTAAGATTGATACTGTTAAAAGTGAACTTACTACTAAGATTGATAATGTAGAAAAG AATTTACAAAAGGATATATCCAACTTAGACGTTAAGATTGATACTGTTAAAAGTGAACTTACTACTAAGATTGATAACGT AGAAAAGAATTTACAAAAGGATATATCCAACTTAGACGTTAAGATTGATACTGTTAAAAGTGAACTTACTACTAAGATTG ATAACGTAGAAAAGAATTTAGATACTAAGATTGATAACGTAGAAAAGAATTTAGATACTAAGATTGATAACGTAGAAAAG AATTTAGATACTAAGATTGATAACGTAGAAAAGAATTTGCAAAAAGATATGTTTAGTTTGGAACAAAGGCTAGAAATAAA GCTGGAAGCCAATAACAAACTTCTTTTGGAAAAGCTGGAAGCCAATAACAAACTTCTTTTGGAAAAGCTGGAAGCCAATA GCAAAGTTCTTTTGGAAAAGCTAGAAGCCAATAACAAAGTTTCTTCAGAAAAGCTTAAAGTCAGCAACAGAATAGTTATT ATTGCAGTAGTAGTTGTGCCCACTGCTATATCTATTCTAACTCCCTTCATTACGTCATTAATTAGCAATTATTTCAAATA G
Upstream 100 bases:
>100_bases TTCGAATTGAAATTTAGATTTGTTAGATTGTTAGATTTTGTAAATATTCTGTTATTTGGCCTTAATTTGTGTTACAATGT ATTTAGTAGGTGAGTAAATT
Downstream 100 bases:
>100_bases AAATTGCAAAGAATTCTTTACTTTAATCAAGAAAAAAAATTTTAGATATAATGCGCTTTTGTAATTTGCAAGTATTTTTG TAGATTCCCAGTTTTTTTAG
Product: hypothetical protein
Products: NA
Alternate protein names: Repeat Motif-Containing Protein; Bdr Proitein; Repeat Motif-Containing Gene Protein; Repeat Motif-Containing Gene; BdrQ Protein; Repeat Motif Gene A Protein; KID Repeat Protein; RepH21 Gene Homologue; ORF15/Rep+; ORF23/BdrA
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MKSSVVTTSITEEQIYKEFLRLGMEQLIAQDLSKRYYHNELTYRDLENLEKQFGIKFDNLVTKIDTVKSELTTKIDNVEK NLQKDISNLDVKIDTVKSELTTKIDNVEKNLQKDISNLDVKIDTVKSELTTKIDNVEKNLDTKIDNVEKNLDTKIDNVEK NLDTKIDNVEKNLQKDMFSLEQRLEIKLEANNKLLLEKLEANNKLLLEKLEANSKVLLEKLEANNKVSSEKLKVSNRIVI IAVVVVPTAISILTPFITSLISNYFK
Sequences:
>Translated_266_residues MKSSVVTTSITEEQIYKEFLRLGMEQLIAQDLSKRYYHNELTYRDLENLEKQFGIKFDNLVTKIDTVKSELTTKIDNVEK NLQKDISNLDVKIDTVKSELTTKIDNVEKNLQKDISNLDVKIDTVKSELTTKIDNVEKNLDTKIDNVEKNLDTKIDNVEK NLDTKIDNVEKNLQKDMFSLEQRLEIKLEANNKLLLEKLEANNKLLLEKLEANSKVLLEKLEANNKVSSEKLKVSNRIVI IAVVVVPTAISILTPFITSLISNYFK >Mature_266_residues MKSSVVTTSITEEQIYKEFLRLGMEQLIAQDLSKRYYHNELTYRDLENLEKQFGIKFDNLVTKIDTVKSELTTKIDNVEK NLQKDISNLDVKIDTVKSELTTKIDNVEKNLQKDISNLDVKIDTVKSELTTKIDNVEKNLDTKIDNVEKNLDTKIDNVEK NLDTKIDNVEKNLQKDMFSLEQRLEIKLEANNKLLLEKLEANNKLLLEKLEANSKVLLEKLEANNKVSSEKLKVSNRIVI IAVVVVPTAISILTPFITSLISNYFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30588; Mature: 30588
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSSVVTTSITEEQIYKEFLRLGMEQLIAQDLSKRYYHNELTYRDLENLEKQFGIKFDNL CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHH VTKIDTVKSELTTKIDNVEKNLQKDISNLDVKIDTVKSELTTKIDNVEKNLQKDISNLDV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCE KIDTVKSELTTKIDNVEKNLDTKIDNVEKNLDTKIDNVEKNLDTKIDNVEKNLQKDMFSL EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EQRLEIKLEANNKLLLEKLEANNKLLLEKLEANSKVLLEKLEANNKVSSEKLKVSNRIVI HHHHEEEEECCCHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHCCCEEE IAVVVVPTAISILTPFITSLISNYFK EHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKSSVVTTSITEEQIYKEFLRLGMEQLIAQDLSKRYYHNELTYRDLENLEKQFGIKFDNL CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHH VTKIDTVKSELTTKIDNVEKNLQKDISNLDVKIDTVKSELTTKIDNVEKNLQKDISNLDV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCE KIDTVKSELTTKIDNVEKNLDTKIDNVEKNLDTKIDNVEKNLDTKIDNVEKNLQKDMFSL EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EQRLEIKLEANNKLLLEKLEANNKLLLEKLEANSKVLLEKLEANNKVSSEKLKVSNRIVI HHHHEEEEECCCHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHCCCEEE IAVVVVPTAISILTPFITSLISNYFK EHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA