Definition | Borrelia burgdorferi B31 plasmid lp28-2, complete sequence. |
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Accession | NC_001852 |
Length | 29,766 |
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The map label for this gene is 11496670
Identifier: 11496670
GI number: 11496670
Start: 6737
End: 7288
Strand: Direct
Name: 11496670
Synonym: BBG09
Alternate gene names: NA
Gene position: 6737-7288 (Clockwise)
Preceding gene: 11496669
Following gene: 11496692
Centisome position: 22.63
GC content: 22.1
Gene sequence:
>552_bases ATGGTAAAAAATAGAAAAGTAATAATAAATGATAGGATTGTAAGAAATGCTACTTATATTAATACTGAAGAACGAGACAA AAAAGAGTATGAACTTTTAAAAAATGAACTTAAAAATAGAATAGAAGATGATATTAGAAATAAAATAAATACAATGAAAA TTTTACTAGAAATTAGAAATAGAAAACTTTATATTTTAGATGGATATAAAAAGTTTGAAGATTTTATTTTTGACTTTAAA ATAGCCAGAACTCAGGCGTATAAGTATATTAAAATAGCAAAACTTATTTTTGAAGGAAAGCTTGAAGAAATTGATATTAT AGAAAATGGGATTGATAAAACTTTATTTAATTTGATGAAAGATAAAAAAATTAACTCTAAAGCAAATTTAATAACACCAC TTAGGGTTAGGCTAGAAACACAAGAGGCATGCGATTTTTACAAAATGAATCCAAAGTTTGCTAATTATATTCTTGAAGAT TTTTATCAAAAAAACAAAGAACAGCTTATTAAAAAATTAGAAGAATATAAAAATAAACAAAAATACTCTTAG
Upstream 100 bases:
>100_bases AATTACTACAAAGAATATTTAAGAATTTTAGAAAAAATTTAGCATGATTTTTTTTAAAAAAAGTCCAGGCACTGGACTTT TTTAGAGAGGAGTTTAAAAA
Downstream 100 bases:
>100_bases TATATTTAAGCAAACTTTTACTTATATAGAATTTTTATTCTAATAGCAGAGTAAAAGAAAAAGACCATTAGCAAAAGCTA AAGGTCTTTTTCAAGGTATT
Product: hypothetical protein
Products: NA
Alternate protein names: PF49 Plasmid Partition Protein; PF-49 Plasmid Partition Protein; PF-49 Protein
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MVKNRKVIINDRIVRNATYINTEERDKKEYELLKNELKNRIEDDIRNKINTMKILLEIRNRKLYILDGYKKFEDFIFDFK IARTQAYKYIKIAKLIFEGKLEEIDIIENGIDKTLFNLMKDKKINSKANLITPLRVRLETQEACDFYKMNPKFANYILED FYQKNKEQLIKKLEEYKNKQKYS
Sequences:
>Translated_183_residues MVKNRKVIINDRIVRNATYINTEERDKKEYELLKNELKNRIEDDIRNKINTMKILLEIRNRKLYILDGYKKFEDFIFDFK IARTQAYKYIKIAKLIFEGKLEEIDIIENGIDKTLFNLMKDKKINSKANLITPLRVRLETQEACDFYKMNPKFANYILED FYQKNKEQLIKKLEEYKNKQKYS >Mature_183_residues MVKNRKVIINDRIVRNATYINTEERDKKEYELLKNELKNRIEDDIRNKINTMKILLEIRNRKLYILDGYKKFEDFIFDFK IARTQAYKYIKIAKLIFEGKLEEIDIIENGIDKTLFNLMKDKKINSKANLITPLRVRLETQEACDFYKMNPKFANYILED FYQKNKEQLIKKLEEYKNKQKYS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22282; Mature: 22282
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKNRKVIINDRIVRNATYINTEERDKKEYELLKNELKNRIEDDIRNKINTMKILLEIRN CCCCCEEEECCCEECCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RKLYILDGYKKFEDFIFDFKIARTQAYKYIKIAKLIFEGKLEEIDIIENGIDKTLFNLMK CEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHH DKKINSKANLITPLRVRLETQEACDFYKMNPKFANYILEDFYQKNKEQLIKKLEEYKNKQ HCCCCCCCCEECHHHEEECHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC KYS CCC >Mature Secondary Structure MVKNRKVIINDRIVRNATYINTEERDKKEYELLKNELKNRIEDDIRNKINTMKILLEIRN CCCCCEEEECCCEECCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RKLYILDGYKKFEDFIFDFKIARTQAYKYIKIAKLIFEGKLEEIDIIENGIDKTLFNLMK CEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHH DKKINSKANLITPLRVRLETQEACDFYKMNPKFANYILEDFYQKNKEQLIKKLEEYKNKQ HCCCCCCCCEECHHHEEECHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC KYS CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA