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The map label for this gene is rimP [H]

Identifier: 15595144

GI number: 15595144

Start: 842501

End: 842989

Strand: Direct

Name: rimP [H]

Synonym: BB0799

Alternate gene names: 15595144

Gene position: 842501-842989 (Clockwise)

Preceding gene: 15595143

Following gene: 15595145

Centisome position: 92.51

GC content: 22.29

Gene sequence:

>489_bases
ATGTATTTAATAAGGTTCTTTAAAAGAACCTTATTATTTTTAGGAATACAGTTGATTAAGTATTTTGACAAAAATAATGA
AGTTTTTAATTTGATAAAAGATTTAACAGGGCGGTTAAATGTTGAGATATTAGAAATTAATATCTTTAGAAATAAAAATA
ATGGAAAAATTCAAATAGTTCTTTATAGTAAAAATTTTTCCTTAGATATTGATTTTTTGACTGATTTGCATAAAATGATT
TTATTAATTTTAGAAGCAAATCTTAAATATGGTTTTACTTTAGAGCTTTCTACTCCAGGAATAGATAGAAAAATAAAAAG
TGACAGAGAGTTTAAAATTTTTGAAGGTAAAAAGATTAAGTTGATGTTGGATAATGAATTTGAAGAGGGTTTTATATTAG
AGTCAAAGCCAAAAAGTTTTATTTTTAAAACAGATAGCAAAGAAGTAAATGTTTTTTATAGTGATGTTAAAAAGGCTAGA
TTAGTTTAA

Upstream 100 bases:

>100_bases
GCTTATAAGGTGATAAAGCTTTCTTTGGCCAAATCTTATAATTTGGTTTAATGTTGACATTATTTTTGCTAAGTGTTAAC
CTTGACTTAAGGTTTAGTTT

Downstream 100 bases:

>100_bases
GGAGGAAGTTTGGATGATAAAGGGCACGGGGCATATGATTGTAAATATTGCAAATGATCGTGGCATGAGTATAGATTCTA
TTAGAAAAACAATTAAAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MYLIRFFKRTLLFLGIQLIKYFDKNNEVFNLIKDLTGRLNVEILEINIFRNKNNGKIQIVLYSKNFSLDIDFLTDLHKMI
LLILEANLKYGFTLELSTPGIDRKIKSDREFKIFEGKKIKLMLDNEFEEGFILESKPKSFIFKTDSKEVNVFYSDVKKAR
LV

Sequences:

>Translated_162_residues
MYLIRFFKRTLLFLGIQLIKYFDKNNEVFNLIKDLTGRLNVEILEINIFRNKNNGKIQIVLYSKNFSLDIDFLTDLHKMI
LLILEANLKYGFTLELSTPGIDRKIKSDREFKIFEGKKIKLMLDNEFEEGFILESKPKSFIFKTDSKEVNVFYSDVKKAR
LV
>Mature_162_residues
MYLIRFFKRTLLFLGIQLIKYFDKNNEVFNLIKDLTGRLNVEILEINIFRNKNNGKIQIVLYSKNFSLDIDFLTDLHKMI
LLILEANLKYGFTLELSTPGIDRKIKSDREFKIFEGKKIKLMLDNEFEEGFILESKPKSFIFKTDSKEVNVFYSDVKKAR
LV

Specific function: Required for maturation of 30S ribosomal subunits [H]

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003728 [H]

Pfam domain/function: PF02576 DUF150 [H]

EC number: NA

Molecular weight: Translated: 19203; Mature: 19203

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLIRFFKRTLLFLGIQLIKYFDKNNEVFNLIKDLTGRLNVEILEINIFRNKNNGKIQIV
CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEEEEEEECCCCEEEEE
LYSKNFSLDIDFLTDLHKMILLILEANLKYGFTLELSTPGIDRKIKSDREFKIFEGKKIK
EEECCCEEEHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCEEEECCCEEE
LMLDNEFEEGFILESKPKSFIFKTDSKEVNVFYSDVKKARLV
EEECCCCCCCEEEECCCCEEEEECCCCEEEEEEECHHHHCCC
>Mature Secondary Structure
MYLIRFFKRTLLFLGIQLIKYFDKNNEVFNLIKDLTGRLNVEILEINIFRNKNNGKIQIV
CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEEEEEEECCCCEEEEE
LYSKNFSLDIDFLTDLHKMILLILEANLKYGFTLELSTPGIDRKIKSDREFKIFEGKKIK
EEECCCEEEHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCEEEECCCEEE
LMLDNEFEEGFILESKPKSFIFKTDSKEVNVFYSDVKKARLV
EEECCCCCCCEEEECCCCEEEEECCCCEEEEEEECHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]