Definition | Borrelia burgdorferi B31 chromosome, complete genome. |
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Accession | NC_001318 |
Length | 910,724 |
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The map label for this gene is 15595143
Identifier: 15595143
GI number: 15595143
Start: 841834
End: 842451
Strand: Direct
Name: 15595143
Synonym: BB0798
Alternate gene names: NA
Gene position: 841834-842451 (Clockwise)
Preceding gene: 15595142
Following gene: 15595144
Centisome position: 92.44
GC content: 25.24
Gene sequence:
>618_bases ATGAGCTATTTAAATGTTTTAAAGAGTATATTTTTGCCTTTTTGTGTCTTTTGTGGAAAAAGGTATGTATCTTCTAATGC TCTTTGTGACCAATGTAAGTCACTTTTTAATTTTAACATTAAATTTGATGAGAATTTGATTTATTTTTTTGAATATAAAG AGCATTACAAATCTTTAATTTTGTCTTATAAAAGGGATGCTCAAAAGTCAATTGGTAGATTTTTGGCAAGTGGAATTGCT GAATGTTTAAATAATATTGATTTTGATCAAATAGTAACTGTTCCTTGTAGTTTTAAAAGAAAATTATTTTATGGTTTTGA TCATATGGAATACATTGGTATTTTGTTAAGCCGTTTTGGTTTTAATTATATAAATATTTTTTCAAGAAAGTATGGAAAAA GCCAGAAGTTAATGAAAGGGAATCTTAGATTTAAAAATCTTGAAAATAAGATTAAATTAAGATCAAAATATAAAAATTTT CAGTTTAAAAAGATTGTTTTACTTGATGATATTGTTACCACAGGAGCATCTATGTGCATTTGTGAAGATCTTATTATGCA ATTGGGAGCTTATAAGGTGATAAAGCTTTCTTTGGCCAAATCTTATAATTTGGTTTAA
Upstream 100 bases:
>100_bases AATTTTATTTCTAACATAGATATTAATAATATTACTCCTTTTCAATCAATTGAGCTGTTAAATCAAATTGTTTTAAAGGT TATTTCTCAGTCCAGTTAGT
Downstream 100 bases:
>100_bases TGTTGACATTATTTTTGCTAAGTGTTAACCTTGACTTAAGGTTTAGTTTATGTATTTAATAAGGTTCTTTAAAAGAACCT TATTATTTTTAGGAATACAG
Product: competence protein F
Products: NA
Alternate protein names: Phosphoribosyltransferase; Amidophosphoribosyltransferase Family Protein; ComF Protein
Number of amino acids: Translated: 205; Mature: 204
Protein sequence:
>205_residues MSYLNVLKSIFLPFCVFCGKRYVSSNALCDQCKSLFNFNIKFDENLIYFFEYKEHYKSLILSYKRDAQKSIGRFLASGIA ECLNNIDFDQIVTVPCSFKRKLFYGFDHMEYIGILLSRFGFNYINIFSRKYGKSQKLMKGNLRFKNLENKIKLRSKYKNF QFKKIVLLDDIVTTGASMCICEDLIMQLGAYKVIKLSLAKSYNLV
Sequences:
>Translated_205_residues MSYLNVLKSIFLPFCVFCGKRYVSSNALCDQCKSLFNFNIKFDENLIYFFEYKEHYKSLILSYKRDAQKSIGRFLASGIA ECLNNIDFDQIVTVPCSFKRKLFYGFDHMEYIGILLSRFGFNYINIFSRKYGKSQKLMKGNLRFKNLENKIKLRSKYKNF QFKKIVLLDDIVTTGASMCICEDLIMQLGAYKVIKLSLAKSYNLV >Mature_204_residues SYLNVLKSIFLPFCVFCGKRYVSSNALCDQCKSLFNFNIKFDENLIYFFEYKEHYKSLILSYKRDAQKSIGRFLASGIAE CLNNIDFDQIVTVPCSFKRKLFYGFDHMEYIGILLSRFGFNYINIFSRKYGKSQKLMKGNLRFKNLENKIKLRSKYKNFQ FKKIVLLDDIVTTGASMCICEDLIMQLGAYKVIKLSLAKSYNLV
Specific function: Unknown
COG id: COG1040
COG function: function code R; Predicted amidophosphoribosyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24014; Mature: 23882
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYLNVLKSIFLPFCVFCGKRYVSSNALCDQCKSLFNFNIKFDENLIYFFEYKEHYKSLI CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEECCCEEEEEHHHHHHHHHH LSYKRDAQKSIGRFLASGIAECLNNIDFDQIVTVPCSFKRKLFYGFDHMEYIGILLSRFG HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEECCCHHHHHHHHCCHHHHHHHHHHHHHC FNYINIFSRKYGKSQKLMKGNLRFKNLENKIKLRSKYKNFQFKKIVLLDDIVTTGASMCI CHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHCCCHHHH CEDLIMQLGAYKVIKLSLAKSYNLV HHHHHHHHCCHHHHHHHHHHHCCCC >Mature Secondary Structure SYLNVLKSIFLPFCVFCGKRYVSSNALCDQCKSLFNFNIKFDENLIYFFEYKEHYKSLI CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEECCCEEEEEHHHHHHHHHH LSYKRDAQKSIGRFLASGIAECLNNIDFDQIVTVPCSFKRKLFYGFDHMEYIGILLSRFG HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEECCCHHHHHHHHCCHHHHHHHHHHHHHC FNYINIFSRKYGKSQKLMKGNLRFKNLENKIKLRSKYKNFQFKKIVLLDDIVTTGASMCI CHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHCCCHHHH CEDLIMQLGAYKVIKLSLAKSYNLV HHHHHHHHCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA