Definition | Borrelia burgdorferi B31 chromosome, complete genome. |
---|---|
Accession | NC_001318 |
Length | 910,724 |
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The map label for this gene is gpmA [H]
Identifier: 15595003
GI number: 15595003
Start: 697571
End: 698332
Strand: Direct
Name: gpmA [H]
Synonym: BB0658
Alternate gene names: 15595003
Gene position: 697571-698332 (Clockwise)
Preceding gene: 15595001
Following gene: 15595006
Centisome position: 76.6
GC content: 34.38
Gene sequence:
>762_bases ATGCTAGGAGATTTTATGTATAAATTAGTTTTAGTAAGACACGGAGAGAGTGAGTGGAATAAAGAAAATCTTTTTACTGG TTGGACAGATGTTAAACTTTCTGACAAGGGTATCGATGAGGCTGTTGAGGCGGGTTTGCTTCTCAAACAAGAAGGCTATT CTTTTGATATTGCTTTTAGTTCTTTGTTGTCAAGAGCTAATGACACTTTAAATATTATTTTGCGAGAATTAGGGCAATCT TATATTAGTGTAAAAAAAACCTGGAGATTAAATGAAAGGCACTATGGAGCTTTGCAAGGTTTAAATAAGTCAGAAACAGC TGCAAAATATGGGGAAGATAAGGTTTTAATTTGGAGACGTAGTTATGATGTGCCCCCAATGTCTTTGGATGAGTCTGATG ATCGTCATCCCATAAAAGATCCAAGATATAAACATATCCCCAAAAGGGAACTTCCTTCAACAGAGTGCCTTAAAGATACT GTTGCAAGAGTTATTCCTTATTGGACTGATGAGATTGCAAAAGAAGTTCTTGAAGGTAAAAAAGTTATTGTTGCTGCTCA CGGTAATTCTTTAAGAGCGCTTGTTAAATATTTTGACAATTTAAGTGAAGAAGATGTTTTAAAGCTTAACATTCCCACAG GCATTCCTTTAGTTTACGAATTAGATAAAGATTTAAATCCCATTAAACATTACTATCTAGGTGATGAGAGCAAAATTAAA AAGGCAATGGAATCTGTTGCTAGTCAAGGAAAGTTAAAGTAA
Upstream 100 bases:
>100_bases TAATGTATTTTAAAGTATATCATTATTTAATTACTAAGGTTTAAATCTTGACTAGATTTTATGCTAATTTATAATTATTA GTATTGGTAAATAAAATAAT
Downstream 100 bases:
>100_bases CGATTTATTTGTATTAAAGTGTAAATAAGTCATATAATTATGACTTATTTTTTATTAATTTTAAGGCTTAAACGTATTTG CTTGTAATCTTTTCAAAGCG
Product: phosphoglyceromutase
Products: NA
Alternate protein names: BPG-dependent PGAM; PGAM; Phosphoglyceromutase; dPGM [H]
Number of amino acids: Translated: 253; Mature: 253
Protein sequence:
>253_residues MLGDFMYKLVLVRHGESEWNKENLFTGWTDVKLSDKGIDEAVEAGLLLKQEGYSFDIAFSSLLSRANDTLNIILRELGQS YISVKKTWRLNERHYGALQGLNKSETAAKYGEDKVLIWRRSYDVPPMSLDESDDRHPIKDPRYKHIPKRELPSTECLKDT VARVIPYWTDEIAKEVLEGKKVIVAAHGNSLRALVKYFDNLSEEDVLKLNIPTGIPLVYELDKDLNPIKHYYLGDESKIK KAMESVASQGKLK
Sequences:
>Translated_253_residues MLGDFMYKLVLVRHGESEWNKENLFTGWTDVKLSDKGIDEAVEAGLLLKQEGYSFDIAFSSLLSRANDTLNIILRELGQS YISVKKTWRLNERHYGALQGLNKSETAAKYGEDKVLIWRRSYDVPPMSLDESDDRHPIKDPRYKHIPKRELPSTECLKDT VARVIPYWTDEIAKEVLEGKKVIVAAHGNSLRALVKYFDNLSEEDVLKLNIPTGIPLVYELDKDLNPIKHYYLGDESKIK KAMESVASQGKLK >Mature_253_residues MLGDFMYKLVLVRHGESEWNKENLFTGWTDVKLSDKGIDEAVEAGLLLKQEGYSFDIAFSSLLSRANDTLNIILRELGQS YISVKKTWRLNERHYGALQGLNKSETAAKYGEDKVLIWRRSYDVPPMSLDESDDRHPIKDPRYKHIPKRELPSTECLKDT VARVIPYWTDEIAKEVLEGKKVIVAAHGNSLRALVKYFDNLSEEDVLKLNIPTGIPLVYELDKDLNPIKHYYLGDESKIK KAMESVASQGKLK
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate [H]
COG id: COG0588
COG function: function code G; Phosphoglycerate mutase 1
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily [H]
Homologues:
Organism=Homo sapiens, GI4505753, Length=250, Percent_Identity=55.6, Blast_Score=278, Evalue=3e-75, Organism=Homo sapiens, GI50593010, Length=253, Percent_Identity=51.7786561264822, Blast_Score=276, Evalue=1e-74, Organism=Homo sapiens, GI71274132, Length=250, Percent_Identity=52.8, Blast_Score=260, Evalue=1e-69, Organism=Homo sapiens, GI4502445, Length=255, Percent_Identity=46.6666666666667, Blast_Score=250, Evalue=8e-67, Organism=Homo sapiens, GI40353764, Length=255, Percent_Identity=46.6666666666667, Blast_Score=250, Evalue=8e-67, Organism=Homo sapiens, GI310129614, Length=162, Percent_Identity=53.7037037037037, Blast_Score=167, Evalue=1e-41, Organism=Homo sapiens, GI9966849, Length=255, Percent_Identity=27.4509803921569, Blast_Score=71, Evalue=7e-13, Organism=Escherichia coli, GI1786970, Length=246, Percent_Identity=59.7560975609756, Blast_Score=305, Evalue=3e-84, Organism=Saccharomyces cerevisiae, GI6322697, Length=246, Percent_Identity=53.2520325203252, Blast_Score=253, Evalue=2e-68, Organism=Saccharomyces cerevisiae, GI6324516, Length=282, Percent_Identity=32.6241134751773, Blast_Score=146, Evalue=3e-36, Organism=Saccharomyces cerevisiae, GI6320183, Length=299, Percent_Identity=32.4414715719064, Blast_Score=138, Evalue=7e-34, Organism=Saccharomyces cerevisiae, GI6324857, Length=213, Percent_Identity=23.0046948356808, Blast_Score=64, Evalue=2e-11, Organism=Drosophila melanogaster, GI85725270, Length=251, Percent_Identity=54.5816733067729, Blast_Score=278, Evalue=2e-75, Organism=Drosophila melanogaster, GI85725272, Length=251, Percent_Identity=54.5816733067729, Blast_Score=278, Evalue=2e-75, Organism=Drosophila melanogaster, GI24650981, Length=251, Percent_Identity=54.5816733067729, Blast_Score=278, Evalue=2e-75, Organism=Drosophila melanogaster, GI24646216, Length=251, Percent_Identity=51.792828685259, Blast_Score=273, Evalue=6e-74, Organism=Drosophila melanogaster, GI28571815, Length=257, Percent_Identity=39.6887159533074, Blast_Score=191, Evalue=5e-49, Organism=Drosophila melanogaster, GI24648979, Length=248, Percent_Identity=39.5161290322581, Blast_Score=189, Evalue=1e-48, Organism=Drosophila melanogaster, GI28571817, Length=248, Percent_Identity=39.5161290322581, Blast_Score=189, Evalue=1e-48,
Paralogues:
None
Copy number: 960 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013078 - InterPro: IPR001345 - InterPro: IPR005952 [H]
Pfam domain/function: PF00300 PGAM [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 28943; Mature: 28943
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: PS00175 PG_MUTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGDFMYKLVLVRHGESEWNKENLFTGWTDVKLSDKGIDEAVEAGLLLKQEGYSFDIAFS CCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHCEEEECCCCEEHHHHH SLLSRANDTLNIILRELGQSYISVKKTWRLNERHYGALQGLNKSETAAKYGEDKVLIWRR HHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHCCCCEEEEEEE SYDVPPMSLDESDDRHPIKDPRYKHIPKRELPSTECLKDTVARVIPYWTDEIAKEVLEGK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCC KVIVAAHGNSLRALVKYFDNLSEEDVLKLNIPTGIPLVYELDKDLNPIKHYYLGDESKIK EEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCCCCEEEECCCCCCHHHHHHCCCHHHHH KAMESVASQGKLK HHHHHHHHCCCCC >Mature Secondary Structure MLGDFMYKLVLVRHGESEWNKENLFTGWTDVKLSDKGIDEAVEAGLLLKQEGYSFDIAFS CCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHCEEEECCCCEEHHHHH SLLSRANDTLNIILRELGQSYISVKKTWRLNERHYGALQGLNKSETAAKYGEDKVLIWRR HHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHCCCCEEEEEEE SYDVPPMSLDESDDRHPIKDPRYKHIPKRELPSTECLKDTVARVIPYWTDEIAKEVLEGK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCC KVIVAAHGNSLRALVKYFDNLSEEDVLKLNIPTGIPLVYELDKDLNPIKHYYLGDESKIK EEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCCCCEEEECCCCCCHHHHHHCCCHHHHH KAMESVASQGKLK HHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA