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The map label for this gene is yggW [C]

Identifier: 15595001

GI number: 15595001

Start: 695631

End: 696764

Strand: Direct

Name: yggW [C]

Synonym: BB0656

Alternate gene names: 15595001

Gene position: 695631-696764 (Clockwise)

Preceding gene: 15594999

Following gene: 15595003

Centisome position: 76.38

GC content: 28.22

Gene sequence:

>1134_bases
ATGAGAGTAGATCTTTTACCTCTTGTCGAGTTAAGTCTTTATATTAATTTGTCATTTTGTTGTAAAGATTTTAGCATTTT
TAATAGAATTTTAGAGGAATTAAAATGTCATTTAATCTTGCTGGGTCATCCAATTATAAAAACACTTTACATTAAGCACG
TAGATTTTTGTTTATCTAGGCAAGATAATTTAAAATTTATTTTCACTTCTTTGTCCAAGTATATTAATTTGGAGTTATTA
GAAGAATTTACTTTAGAAATTATTCCGGGTTATGTTGATTTTGAAAAATTCAAACTTTTGGATGAATTTTGTATTACTAG
AATTAATCTTAATGTTCAAAGTTTTTCTTTAGAGTTTAGAAAGATTGTGGGGATACCCGAAATTTCTTATAAAAAATTGA
ATATTTTGATTAACAATATTAGAAAGTTTCCTTTTGATTTGAATATTGACATGACTGTCAATATGCCTTTGCAAAAAAAA
TCTCATCTCAAGCGAGATTTGAAAGAATTGCTTTCATATATGCCTGAGCATATTTGTTTTAGCGATTTTATATGTGAAGA
GGAAGGCTTTGTCTTGAGAGATTTTGATAACAGTATTGATTCGGAAAAACTGTGGTTTTGTGCTCTGGAGTGTCTAGAAT
CCAATGGCTACATTAATTATGAAATTACTAATTTTGCATTAAAGGGGCATGAGAGCAGGCACAATAAGCTAAATTGGGAG
TTAAAGCCGCATTTAGGATTAGGATTGTATGCTGTAAGTTTGCTTTTTTGTAATGACAAGAATAATAATGTAAGAGCTTT
GATTAGAAAAACTGGTAGTTTTGTCAAAGCAAATAATCACTTAGTAACGTTTGAATTGTTAGAGGATTTGGAGTTTTTTG
TTTATCATTTTATTCAAGGGCTTGGAACCATTCAAGGTGTCAGCTTGAGGGCTCTTAGGCTTAGATTTGAGTATAATGAA
AAACAATTTTTTCAGTTTATTAATTACTGCTCAACTTTAAGTAAAAAGTTTGTTTTTGATGATAATATTATGCTATTAAA
AGGGAGAGAAAGGTTTAAGTTAAATTTTTATTTAGTAAAAATTATAAACCATTTTAATGATAACTTTTTTAAAGTTAAGC
TTAGGCTTCCTTGA

Upstream 100 bases:

>100_bases
TCTCCTTCAATCTACCTTATTTATTGTATTTTTTAAATATATTTTAATATTTATACTTTATATATGTTATAATTAAACCT
AAATTTTTAAAAGACCAATT

Downstream 100 bases:

>100_bases
TTTGTTTGTCTTGGTAATAAACTATTCTTGTGTTTTTATGGTTGAATATTCCAATCTCAAGTATACCTGGAAATAGTTTG
AAGTATTTTTCTGTTCCTTC

Product: oxygen-independent coproporphyrinogen III oxidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MRVDLLPLVELSLYINLSFCCKDFSIFNRILEELKCHLILLGHPIIKTLYIKHVDFCLSRQDNLKFIFTSLSKYINLELL
EEFTLEIIPGYVDFEKFKLLDEFCITRINLNVQSFSLEFRKIVGIPEISYKKLNILINNIRKFPFDLNIDMTVNMPLQKK
SHLKRDLKELLSYMPEHICFSDFICEEEGFVLRDFDNSIDSEKLWFCALECLESNGYINYEITNFALKGHESRHNKLNWE
LKPHLGLGLYAVSLLFCNDKNNNVRALIRKTGSFVKANNHLVTFELLEDLEFFVYHFIQGLGTIQGVSLRALRLRFEYNE
KQFFQFINYCSTLSKKFVFDDNIMLLKGRERFKLNFYLVKIINHFNDNFFKVKLRLP

Sequences:

>Translated_377_residues
MRVDLLPLVELSLYINLSFCCKDFSIFNRILEELKCHLILLGHPIIKTLYIKHVDFCLSRQDNLKFIFTSLSKYINLELL
EEFTLEIIPGYVDFEKFKLLDEFCITRINLNVQSFSLEFRKIVGIPEISYKKLNILINNIRKFPFDLNIDMTVNMPLQKK
SHLKRDLKELLSYMPEHICFSDFICEEEGFVLRDFDNSIDSEKLWFCALECLESNGYINYEITNFALKGHESRHNKLNWE
LKPHLGLGLYAVSLLFCNDKNNNVRALIRKTGSFVKANNHLVTFELLEDLEFFVYHFIQGLGTIQGVSLRALRLRFEYNE
KQFFQFINYCSTLSKKFVFDDNIMLLKGRERFKLNFYLVKIINHFNDNFFKVKLRLP
>Mature_377_residues
MRVDLLPLVELSLYINLSFCCKDFSIFNRILEELKCHLILLGHPIIKTLYIKHVDFCLSRQDNLKFIFTSLSKYINLELL
EEFTLEIIPGYVDFEKFKLLDEFCITRINLNVQSFSLEFRKIVGIPEISYKKLNILINNIRKFPFDLNIDMTVNMPLQKK
SHLKRDLKELLSYMPEHICFSDFICEEEGFVLRDFDNSIDSEKLWFCALECLESNGYINYEITNFALKGHESRHNKLNWE
LKPHLGLGLYAVSLLFCNDKNNNVRALIRKTGSFVKANNHLVTFELLEDLEFFVYHFIQGLGTIQGVSLRALRLRFEYNE
KQFFQFINYCSTLSKKFVFDDNIMLLKGRERFKLNFYLVKIINHFNDNFFKVKLRLP

Specific function: Unknown

COG id: COG0635

COG function: function code H; Coproporphyrinogen III oxidase and related Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the anaerobic coproporphyrinogen-III oxidase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR004559
- InterPro:   IPR010723
- InterPro:   IPR007197 [H]

Pfam domain/function: PF06969 HemN_C; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 44757; Mature: 44757

Theoretical pI: Translated: 7.89; Mature: 7.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVDLLPLVELSLYINLSFCCKDFSIFNRILEELKCHLILLGHPIIKTLYIKHVDFCLSR
CCCCCHHHEEEEEEEEEHHHHHHHHHHHHHHHHHCEEEEEECCHHHHHHHHHHHHHHHCC
QDNLKFIFTSLSKYINLELLEEFTLEIIPGYVDFEKFKLLDEFCITRINLNVQSFSLEFR
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEEEECEEEHHEEEEH
KIVGIPEISYKKLNILINNIRKFPFDLNIDMTVNMPLQKKSHLKRDLKELLSYMPEHICF
HHCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCHHHHHH
SDFICEEEGFVLRDFDNSIDSEKLWFCALECLESNGYINYEITNFALKGHESRHNKLNWE
HHHEECCCCCEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEEEEEEEECCCCCCCCCCEE
LKPHLGLGLYAVSLLFCNDKNNNVRALIRKTGSFVKANNHLVTFELLEDLEFFVYHFIQG
ECCCCCHHHHEEEEEEECCCCCCHHHHEECCCCEEECCCCEEEHHHHHHHHHHHHHHHHH
LGTIQGVSLRALRLRFEYNEKQFFQFINYCSTLSKKFVFDDNIMLLKGRERFKLNFYLVK
CCCCCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHCEEECCCEEEEECCCEEEEEHHHEE
IINHFNDNFFKVKLRLP
HHHHCCCCEEEEEEECC
>Mature Secondary Structure
MRVDLLPLVELSLYINLSFCCKDFSIFNRILEELKCHLILLGHPIIKTLYIKHVDFCLSR
CCCCCHHHEEEEEEEEEHHHHHHHHHHHHHHHHHCEEEEEECCHHHHHHHHHHHHHHHCC
QDNLKFIFTSLSKYINLELLEEFTLEIIPGYVDFEKFKLLDEFCITRINLNVQSFSLEFR
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEEEECEEEHHEEEEH
KIVGIPEISYKKLNILINNIRKFPFDLNIDMTVNMPLQKKSHLKRDLKELLSYMPEHICF
HHCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCHHHHHH
SDFICEEEGFVLRDFDNSIDSEKLWFCALECLESNGYINYEITNFALKGHESRHNKLNWE
HHHEECCCCCEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEEEEEEEECCCCCCCCCCEE
LKPHLGLGLYAVSLLFCNDKNNNVRALIRKTGSFVKANNHLVTFELLEDLEFFVYHFIQG
ECCCCCHHHHEEEEEEECCCCCCHHHHEECCCCEEECCCCEEEHHHHHHHHHHHHHHHHH
LGTIQGVSLRALRLRFEYNEKQFFQFINYCSTLSKKFVFDDNIMLLKGRERFKLNFYLVK
CCCCCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHCEEECCCEEEEECCCEEEEEHHHEE
IINHFNDNFFKVKLRLP
HHHHCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12089438 [H]