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The map label for this gene is cheD [H]

Identifier: 15594951

GI number: 15594951

Start: 631991

End: 632482

Strand: Direct

Name: cheD [H]

Synonym: BB0606

Alternate gene names: 15594951

Gene position: 631991-632482 (Clockwise)

Preceding gene: 15594950

Following gene: 15594952

Centisome position: 69.39

GC content: 32.52

Gene sequence:

>492_bases
ATGTTAAATCATTTTAATTTTAAATTAAAACGCGATGTTACAATAATAGTTCCTGGTGAAGCTTTTGTTTCAAACAAAAG
AGTGATTTCTACAATTCTTGGTTCTTGTGTTGCTGTTGTGCTTTGCGACGAATCAAACAATTTAATTGGAATGAATCATT
ATGTTCTAGTTAAGTCAGATCTTGACATATCTCCTGATCAAAGGGGAAGATATGGGATTTATGCTATTCCTATGTTAATA
AATGCAATGCTCGAAAATGGAGCTAGCAAAAGTAATCTTAAGGCTAAGCTTTTTGGTGGAACTAATTTTATGGCAAAAGG
ATCGGTTAAGGTGGGGCTTGAAAATTCAGAGTTTGCCGTTAATACATTGAATAAGTATCGTATTCCAATCTTAGCTAAAG
ATTTTGATCAATCTAAGTCGCGAAAAATTTTTGCTTTTCCTGAAAACTTTAAGGTTATTGTGGAATATCCAGACGGAACA
AAGGTTTTTTAA

Upstream 100 bases:

>100_bases
GGGGATGTTGCTTTGTTTAGTGGCAAGGTAAAAAGATTAGGGTTTTGGCAAGGTCTTTATAAGAGTTTTATAAATCTTTT
TTCAAGAGAGTATTAATTTT

Downstream 100 bases:

>100_bases
TTTTGTCTAATGATGATTTTTTAAAAAATTCTCTCAATCAATTTCAATATGAAGCAGTTACTACTATTGAAGGCGCTCTT
TTAATTATTGCTGGTGCTGG

Product: chemotaxis protein CheD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MLNHFNFKLKRDVTIIVPGEAFVSNKRVISTILGSCVAVVLCDESNNLIGMNHYVLVKSDLDISPDQRGRYGIYAIPMLI
NAMLENGASKSNLKAKLFGGTNFMAKGSVKVGLENSEFAVNTLNKYRIPILAKDFDQSKSRKIFAFPENFKVIVEYPDGT
KVF

Sequences:

>Translated_163_residues
MLNHFNFKLKRDVTIIVPGEAFVSNKRVISTILGSCVAVVLCDESNNLIGMNHYVLVKSDLDISPDQRGRYGIYAIPMLI
NAMLENGASKSNLKAKLFGGTNFMAKGSVKVGLENSEFAVNTLNKYRIPILAKDFDQSKSRKIFAFPENFKVIVEYPDGT
KVF
>Mature_163_residues
MLNHFNFKLKRDVTIIVPGEAFVSNKRVISTILGSCVAVVLCDESNNLIGMNHYVLVKSDLDISPDQRGRYGIYAIPMLI
NAMLENGASKSNLKAKLFGGTNFMAKGSVKVGLENSEFAVNTLNKYRIPILAKDFDQSKSRKIFAFPENFKVIVEYPDGT
KVF

Specific function: Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis [H]

COG id: COG1871

COG function: function code NT; Chemotaxis protein; stimulates methylation of MCP proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CheD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005659 [H]

Pfam domain/function: PF03975 CheD [H]

EC number: =3.5.1.44 [H]

Molecular weight: Translated: 18141; Mature: 18141

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNHFNFKLKRDVTIIVPGEAFVSNKRVISTILGSCVAVVLCDESNNLIGMNHYVLVKSD
CCCCCCEEEECCEEEEECCHHHHCCCHHHHHHHHCEEEEEEECCCCCEEECCEEEEEECC
LDISPDQRGRYGIYAIPMLINAMLENGASKSNLKAKLFGGTNFMAKGSVKVGLENSEFAV
CCCCCCCCCCEEEEEHHHHHHHHHHCCCCCCCCEEEEECCCCEEEECEEEEEECCCCEEE
NTLNKYRIPILAKDFDQSKSRKIFAFPENFKVIVEYPDGTKVF
ECCCEEECEEEECCCCCCCCCEEEEECCCCEEEEECCCCCCCC
>Mature Secondary Structure
MLNHFNFKLKRDVTIIVPGEAFVSNKRVISTILGSCVAVVLCDESNNLIGMNHYVLVKSD
CCCCCCEEEECCEEEEECCHHHHCCCHHHHHHHHCEEEEEEECCCCCEEECCEEEEEECC
LDISPDQRGRYGIYAIPMLINAMLENGASKSNLKAKLFGGTNFMAKGSVKVGLENSEFAV
CCCCCCCCCCEEEEEHHHHHHHHHHCCCCCCCCEEEEECCCCEEEECEEEEEECCCCEEE
NTLNKYRIPILAKDFDQSKSRKIFAFPENFKVIVEYPDGTKVF
ECCCEEECEEEECCCCCCCCCEEEEECCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA