Definition | Borrelia burgdorferi B31 chromosome, complete genome. |
---|---|
Accession | NC_001318 |
Length | 910,724 |
Click here to switch to the map view.
The map label for this gene is 15594899
Identifier: 15594899
GI number: 15594899
Start: 565943
End: 567823
Strand: Direct
Name: 15594899
Synonym: BB0554
Alternate gene names: NA
Gene position: 565943-567823 (Clockwise)
Preceding gene: 15594897
Following gene: 15594900
Centisome position: 62.14
GC content: 25.78
Gene sequence:
>1881_bases TTGGTGGAGTTTTTGAGTTTAACAAATGTGGATGCGCATGAATTTTGGGCTTTGCCAGTTTGCTGCAATGTTAAAGATTC TTTTATTGAAGATTTTAGTTTTGTAGATGAACATGTAAATTCAATTTTTAGCATCAGTTATAAAGATAATATAACTTTAA AGTTTAGAGATTTTGTTGATTCTAATGAATTTAACTTGAAGCTTTTTGACAATAAAATAAGCTTTGAAGGTCAAATTCCT TTGGTTTTGTATTCAGACAATTTGGATTATTTACTAAAAGCAGAAAAAAGTGTTCTTTTTAATCTAAGAGTTGGTGATGC GAATAGTAGTTATTCTTCTGGATTTACAAAGAAAGAGTCTGGAACTTGCAATGTTTTGAATGCTTGTTATGAATTTAGCG ATTACAATAGTTTTTCAGATGATTTTATTTTAGTTAAAATATTTTTTGATTCTGAAAATTTAATTATTGATGCTAATGTA GACAATATTTCTTTTTTAAAATTTTTTATTAGTGAAAATTTTGGTGTAAGTAAAGACAAAATAAAAATAAATTCTCTTGA TAATTACTGGTCTAGCTCTATTTTCCCTATTTCTTTTAATGCAATTTTACAAGGCATTGTAATTTCAAAAAAGATTAATA AAAGGGTTAATATTGTTTACTACAAAAGACATTTTGGAATTTTAGATAATTTAAATTTAACTTTTTCAGTTTCTAATTGT TTAGTGGCGGATAATAAGCTCTCAAAAATTATTTTAGAAATTATAATAAATAGACCTTTAAATTTTTTATATAAGTTTTA TTTTAAATTTATTAATAATATTTTCAAAAATTTGTTTTTTGATGGGTTTTTAGAAATTTTTTTTGTTGAGAATAAAAGCG ATTTTATCTTTTTTTATGACAATCTTTTGGCATTTGAGACTTCTGTTTATAATTTTATTTATTCCAATTTTTATAATCTT GCTTTGTCGATGTCTTGTGAGCCAATAGGTTATTTGCTTACACAGATTAAAGGTGATTATGCTAGTTTTTTAAAAATTTT TAAAAAACTAGATTTAAAAAATTCTTTAATAAAGAAATCTGCCGTTTTAAGTGTTAATAAGGATTATGACATTTTTGATA CTAGTCGAAGGGGAGTTGGTTTTGCTTATTTGAATTCAAGTGCTTATTTTTTAAGCGAAGAGCAATATGTTGTTGCTTTC TTATACAAGGATGGATTAAATGTATTTTTGCCCTACAGTATTATTGACAACAATTTAAGCAATTATTTGAAAAATAGTTT GGCTAAAACACTGGGCTTGCCTTATAGCAGTGTAAATTTTTTGATAGGCGAGAGTGTATTAGATTTTGGTAATTTTTATA ACCTTCTTTTTAAAGATCCTTATTTAATTGAAAAAGCAATTTTAAGTATTAAGGACAATTTTTCTTCTTTGATAGATTCA GATTTTATAAATGAATATCCTGTAGTTTTTAAGGAAAAAATAGCTATTAGCGATGTTAATGATTGTGTGCTTGGGTGTTC TGTTGAGCTTAAATTTGAATTTTATTCTCTTAGCGCTGTTTTTAGCAATGTGAGCTTTTTTGTAGAACAAGGCAAATTTA CTAAGCTTAAGTTAAATAACAAGAGAATTCGCACAATATTTGGATTAGCGGTTGATTATGTATTTTGTCGTGCTAATGTA AGTTGCGATATTAAAGATTGTTTAAGCTTAGAGTTTATTGAAGATGGCGAGTTTATTTTTTCTTTTAGAAGTGTTTTTAT TGTTTCTGTTTCTGCAATTCGAACTGCTTTGATTCAGGTATTTGATTTTAATGCAAGCAAAACGCCCCTTGATTTTGAAG AAATTTTAAATAGTTGGAGTATAAAAATTGACATTAATTAA
Upstream 100 bases:
>100_bases TTGTTGCATGTATTGGGTAGGGTCGGATGTTTTTGAGGTTTTATTTTTTAATCCTTTTTATTTATGCAATGTTAGGTTTT TACTAATTTAATTTTTTTGT
Downstream 100 bases:
>100_bases TTTCAACTTAAATGGAGAGAGTATTTCAAAAAAGATTAGTCTTTCTTTGGGGACCAGAAATCTTTTGGATTCTATTTTTT TTGCTAAGAGCAATAGTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 626; Mature: 626
Protein sequence:
>626_residues MVEFLSLTNVDAHEFWALPVCCNVKDSFIEDFSFVDEHVNSIFSISYKDNITLKFRDFVDSNEFNLKLFDNKISFEGQIP LVLYSDNLDYLLKAEKSVLFNLRVGDANSSYSSGFTKKESGTCNVLNACYEFSDYNSFSDDFILVKIFFDSENLIIDANV DNISFLKFFISENFGVSKDKIKINSLDNYWSSSIFPISFNAILQGIVISKKINKRVNIVYYKRHFGILDNLNLTFSVSNC LVADNKLSKIILEIIINRPLNFLYKFYFKFINNIFKNLFFDGFLEIFFVENKSDFIFFYDNLLAFETSVYNFIYSNFYNL ALSMSCEPIGYLLTQIKGDYASFLKIFKKLDLKNSLIKKSAVLSVNKDYDIFDTSRRGVGFAYLNSSAYFLSEEQYVVAF LYKDGLNVFLPYSIIDNNLSNYLKNSLAKTLGLPYSSVNFLIGESVLDFGNFYNLLFKDPYLIEKAILSIKDNFSSLIDS DFINEYPVVFKEKIAISDVNDCVLGCSVELKFEFYSLSAVFSNVSFFVEQGKFTKLKLNNKRIRTIFGLAVDYVFCRANV SCDIKDCLSLEFIEDGEFIFSFRSVFIVSVSAIRTALIQVFDFNASKTPLDFEEILNSWSIKIDIN
Sequences:
>Translated_626_residues MVEFLSLTNVDAHEFWALPVCCNVKDSFIEDFSFVDEHVNSIFSISYKDNITLKFRDFVDSNEFNLKLFDNKISFEGQIP LVLYSDNLDYLLKAEKSVLFNLRVGDANSSYSSGFTKKESGTCNVLNACYEFSDYNSFSDDFILVKIFFDSENLIIDANV DNISFLKFFISENFGVSKDKIKINSLDNYWSSSIFPISFNAILQGIVISKKINKRVNIVYYKRHFGILDNLNLTFSVSNC LVADNKLSKIILEIIINRPLNFLYKFYFKFINNIFKNLFFDGFLEIFFVENKSDFIFFYDNLLAFETSVYNFIYSNFYNL ALSMSCEPIGYLLTQIKGDYASFLKIFKKLDLKNSLIKKSAVLSVNKDYDIFDTSRRGVGFAYLNSSAYFLSEEQYVVAF LYKDGLNVFLPYSIIDNNLSNYLKNSLAKTLGLPYSSVNFLIGESVLDFGNFYNLLFKDPYLIEKAILSIKDNFSSLIDS DFINEYPVVFKEKIAISDVNDCVLGCSVELKFEFYSLSAVFSNVSFFVEQGKFTKLKLNNKRIRTIFGLAVDYVFCRANV SCDIKDCLSLEFIEDGEFIFSFRSVFIVSVSAIRTALIQVFDFNASKTPLDFEEILNSWSIKIDIN >Mature_626_residues MVEFLSLTNVDAHEFWALPVCCNVKDSFIEDFSFVDEHVNSIFSISYKDNITLKFRDFVDSNEFNLKLFDNKISFEGQIP LVLYSDNLDYLLKAEKSVLFNLRVGDANSSYSSGFTKKESGTCNVLNACYEFSDYNSFSDDFILVKIFFDSENLIIDANV DNISFLKFFISENFGVSKDKIKINSLDNYWSSSIFPISFNAILQGIVISKKINKRVNIVYYKRHFGILDNLNLTFSVSNC LVADNKLSKIILEIIINRPLNFLYKFYFKFINNIFKNLFFDGFLEIFFVENKSDFIFFYDNLLAFETSVYNFIYSNFYNL ALSMSCEPIGYLLTQIKGDYASFLKIFKKLDLKNSLIKKSAVLSVNKDYDIFDTSRRGVGFAYLNSSAYFLSEEQYVVAF LYKDGLNVFLPYSIIDNNLSNYLKNSLAKTLGLPYSSVNFLIGESVLDFGNFYNLLFKDPYLIEKAILSIKDNFSSLIDS DFINEYPVVFKEKIAISDVNDCVLGCSVELKFEFYSLSAVFSNVSFFVEQGKFTKLKLNNKRIRTIFGLAVDYVFCRANV SCDIKDCLSLEFIEDGEFIFSFRSVFIVSVSAIRTALIQVFDFNASKTPLDFEEILNSWSIKIDIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72103; Mature: 72103
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVEFLSLTNVDAHEFWALPVCCNVKDSFIEDFSFVDEHVNSIFSISYKDNITLKFRDFVD CEEEEEECCCCHHHEEEEEEEECCCHHHHHHHHHHHHHHHHEEEEEECCCEEEEEEECCC SNEFNLKLFDNKISFEGQIPLVLYSDNLDYLLKAEKSVLFNLRVGDANSSYSSGFTKKES CCCEEEEEECCEECCCCCEEEEEEECCCCEEEECCCEEEEEEEECCCCCCCCCCCCCCCC GTCNVLNACYEFSDYNSFSDDFILVKIFFDSENLIIDANVDNISFLKFFISENFGVSKDK CCCHHHHHHHHHCCCCCCCCCEEEEEEEECCCCEEEECCCCCCHHHEEEHHCCCCCCCCE IKINSLDNYWSSSIFPISFNAILQGIVISKKINKRVNIVYYKRHFGILDNLNLTFSVSNC EEEECCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCEEEEEEEEECCEEECCEEEEEECCE LVADNKLSKIILEIIINRPLNFLYKFYFKFINNIFKNLFFDGFLEIFFVENKSDFIFFYD EEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCEEEEEC NLLAFETSVYNFIYSNFYNLALSMSCEPIGYLLTQIKGDYASFLKIFKKLDLKNSLIKKS CHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHH AVLSVNKDYDIFDTSRRGVGFAYLNSSAYFLSEEQYVVAFLYKDGLNVFLPYSIIDNNLS EEEEECCCCCCEECCCCCEEEEEECCCEEEEECCCEEEEEEEECCCCEEEEHHHHHCHHH NYLKNSLAKTLGLPYSSVNFLIGESVLDFGNFYNLLFKDPYLIEKAILSIKDNFSSLIDS HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH DFINEYPVVFKEKIAISDVNDCVLGCSVELKFEFYSLSAVFSNVSFFVEQGKFTKLKLNN HHCCCCCCCEEEEEEECCCCCEEEEEEEEEEEEEEEHHHHHHHHHHEEECCCEEEEEECC KRIRTIFGLAVDYVFCRANVSCDIKDCLSLEFIEDGEFIFSFRSVFIVSVSAIRTALIQV CEEHHHHHHHHHHHEEECCCCCCHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH FDFNASKTPLDFEEILNSWSIKIDIN EECCCCCCCCCHHHHHCCEEEEEEEC >Mature Secondary Structure MVEFLSLTNVDAHEFWALPVCCNVKDSFIEDFSFVDEHVNSIFSISYKDNITLKFRDFVD CEEEEEECCCCHHHEEEEEEEECCCHHHHHHHHHHHHHHHHEEEEEECCCEEEEEEECCC SNEFNLKLFDNKISFEGQIPLVLYSDNLDYLLKAEKSVLFNLRVGDANSSYSSGFTKKES CCCEEEEEECCEECCCCCEEEEEEECCCCEEEECCCEEEEEEEECCCCCCCCCCCCCCCC GTCNVLNACYEFSDYNSFSDDFILVKIFFDSENLIIDANVDNISFLKFFISENFGVSKDK CCCHHHHHHHHHCCCCCCCCCEEEEEEEECCCCEEEECCCCCCHHHEEEHHCCCCCCCCE IKINSLDNYWSSSIFPISFNAILQGIVISKKINKRVNIVYYKRHFGILDNLNLTFSVSNC EEEECCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCEEEEEEEEECCEEECCEEEEEECCE LVADNKLSKIILEIIINRPLNFLYKFYFKFINNIFKNLFFDGFLEIFFVENKSDFIFFYD EEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCEEEEEC NLLAFETSVYNFIYSNFYNLALSMSCEPIGYLLTQIKGDYASFLKIFKKLDLKNSLIKKS CHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHH AVLSVNKDYDIFDTSRRGVGFAYLNSSAYFLSEEQYVVAFLYKDGLNVFLPYSIIDNNLS EEEEECCCCCCEECCCCCEEEEEECCCEEEEECCCEEEEEEEECCCCEEEEHHHHHCHHH NYLKNSLAKTLGLPYSSVNFLIGESVLDFGNFYNLLFKDPYLIEKAILSIKDNFSSLIDS HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH DFINEYPVVFKEKIAISDVNDCVLGCSVELKFEFYSLSAVFSNVSFFVEQGKFTKLKLNN HHCCCCCCCEEEEEEECCCCCEEEEEEEEEEEEEEEHHHHHHHHHHEEECCCEEEEEECC KRIRTIFGLAVDYVFCRANVSCDIKDCLSLEFIEDGEFIFSFRSVFIVSVSAIRTALIQV CEEHHHHHHHHHHHEEECCCCCCHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH FDFNASKTPLDFEEILNSWSIKIDIN EECCCCCCCCCHHHHHCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA