Definition | Borrelia burgdorferi B31 chromosome, complete genome. |
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Accession | NC_001318 |
Length | 910,724 |
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The map label for this gene is pheT [H]
Identifier: 15594859
GI number: 15594859
Start: 524554
End: 526254
Strand: Direct
Name: pheT [H]
Synonym: BB0514
Alternate gene names: 15594859
Gene position: 524554-526254 (Clockwise)
Preceding gene: 15594858
Following gene: 15594860
Centisome position: 57.6
GC content: 28.22
Gene sequence:
>1701_bases ATGCCAAAGTTAGAAATTTATAAAAATCTTTTTTTAGATAAAATAGGAAAAAATTTTACAAATTTAGAGATTTCAGAATT ACTTGAACCATTTAAGGCAGAATTTGATGGGTTTGATGAGAGTTCGGGAAAAATCAAAATAGAATTTAATGATACAAATA GGCCAGATTTGTGGTCTTATTTAGGACTTGCTCGTCAGATAAAAACGTATTTTTTTGGAGAAATGCCCTATTATGATTTT TTTTCAAAAAAGGGAGATTTTAAGAAGTTTTATGGTGAAATTTTAGTTGATGGCAAAATGTCTCAAATCAGACCGTTTAT TTTTGGATTTTTAGCAAAAGGATTGATTATTAATGATAAAATGCTTGAGACACTAATTCAATTTCAAGAAAAACTTTGTC AGAATTATGGACAAAAGAGAAGAAGAATTGCAATGGGGATGTATAATTCTAATTTTATTAAATTCCCAATAAGTTATATT GCCTCATCTCCTAATCACAAGTTTGTTCCCTTTGGAATGGATTATGAGCTTTCTCTTTTAGAGATAAATGAAAAGCATCC CAAAGGATTGGAATATTCACATATTATTAAAAATTTTGATAAGTTTCCGTTATTATTAGATGATAATAATAATGTAGTCT CTTATCCTCCAATAATTAATTCTAACAATATTGGATCTTTAAAGGTTGGTGATACTGATTTATTTGTTGAGGTTACAGGT ATTGATTTTGAAGCAACTTTGTTAGCGTTATCTATAGCAGCCTGTGATTTTTATGATATGGGTTTTGAAATTTTGCCCGT AAAAACTGTGTTTAGAGAGCCTTTTAATTTAGATTTTAAAGAATTGGTATGTCCTTATTATTTTCAAGAAGAAGTGGAGT TTAATGTTGAAAATATTAATAGACTGCTTGGAAGCAATTTAACATTAGAGCGTATTTGCCTTAGTTTAAAAAAAATGGGA GTAAATTCTTATTCCAAAGATTTTAAGAATTATATTGTTCCACCTTTTTATAGAAACGATTTTCTTCATGAGGTTGATGT AATTGAAGATGTAATGATAGGGGAGGGTCTTTCAAGTTTTAATCCGGAGCTTCCCAAGGCTTTTGCAGTGGGAAGGCTTA GTCCTTTAGAAGAGTTTTCAAGGAATGTTAGAAATTTAATGGTGGGTATGGGATTTCAAGAGATGATTTATAATTATATG GGTTCTAAGAAAGATTTTATTGACAGAATGAATATTAATGATCAAAATTTTTTAAAAGTATCTAATCCAATGACAGAGAA TTATGAATATATTAGAGCATCAATAATTCCTAATTTATTAAAATCAGAAAGTGTTAGTTCTAATTTTCCCTATCCACATA AAATTTTTGAAATTGGCAAGGTGGCTTTAAAGAATCTGGATACTACCGAAGGAACAAGTACTTTTACTAATTTAGCTTTT TTAATGTCTGGTAAAGAAATTTCTTTTAATGAGATTAATTCAATTGTTGCAACACTTTTTTATTATTTAAATATTGAGAT TAATTTAATAGAATCAAAAACCACTTTTTATATTAATGGCAGGGGAGCGGATATTGTAATTGAAGGTTTTAATATAGGTG GTTTTGGCGAAATTTCACCTTATGTGTTAAATAATTTTGGTATTTTTATTCCATGTTCTGTTTTTGAGGTTAATATAAAC AAACTTATGAGTCGATCTTAA
Upstream 100 bases:
>100_bases GGAATAGATAGAATGGCTTTAATGCACTTAGGTCTAAATGATTTGAGAGATCTATTTACTTATGATATTGGTGATGTTAT TTTAAGACGAGGAAAGATAG
Downstream 100 bases:
>100_bases GCATTGAATATTAGTTTTAGCAATGTTAAGATTAATATTCAAATTTTTAAGAGAGGCCTGAAGTTTAGATATGTTGGAAT TTGAAACTATTGATATAAAT
Product: phenylalanyl-tRNA synthetase subunit beta
Products: NA
Alternate protein names: Phenylalanine--tRNA ligase beta chain; PheRS [H]
Number of amino acids: Translated: 566; Mature: 565
Protein sequence:
>566_residues MPKLEIYKNLFLDKIGKNFTNLEISELLEPFKAEFDGFDESSGKIKIEFNDTNRPDLWSYLGLARQIKTYFFGEMPYYDF FSKKGDFKKFYGEILVDGKMSQIRPFIFGFLAKGLIINDKMLETLIQFQEKLCQNYGQKRRRIAMGMYNSNFIKFPISYI ASSPNHKFVPFGMDYELSLLEINEKHPKGLEYSHIIKNFDKFPLLLDDNNNVVSYPPIINSNNIGSLKVGDTDLFVEVTG IDFEATLLALSIAACDFYDMGFEILPVKTVFREPFNLDFKELVCPYYFQEEVEFNVENINRLLGSNLTLERICLSLKKMG VNSYSKDFKNYIVPPFYRNDFLHEVDVIEDVMIGEGLSSFNPELPKAFAVGRLSPLEEFSRNVRNLMVGMGFQEMIYNYM GSKKDFIDRMNINDQNFLKVSNPMTENYEYIRASIIPNLLKSESVSSNFPYPHKIFEIGKVALKNLDTTEGTSTFTNLAF LMSGKEISFNEINSIVATLFYYLNIEINLIESKTTFYINGRGADIVIEGFNIGGFGEISPYVLNNFGIFIPCSVFEVNIN KLMSRS
Sequences:
>Translated_566_residues MPKLEIYKNLFLDKIGKNFTNLEISELLEPFKAEFDGFDESSGKIKIEFNDTNRPDLWSYLGLARQIKTYFFGEMPYYDF FSKKGDFKKFYGEILVDGKMSQIRPFIFGFLAKGLIINDKMLETLIQFQEKLCQNYGQKRRRIAMGMYNSNFIKFPISYI ASSPNHKFVPFGMDYELSLLEINEKHPKGLEYSHIIKNFDKFPLLLDDNNNVVSYPPIINSNNIGSLKVGDTDLFVEVTG IDFEATLLALSIAACDFYDMGFEILPVKTVFREPFNLDFKELVCPYYFQEEVEFNVENINRLLGSNLTLERICLSLKKMG VNSYSKDFKNYIVPPFYRNDFLHEVDVIEDVMIGEGLSSFNPELPKAFAVGRLSPLEEFSRNVRNLMVGMGFQEMIYNYM GSKKDFIDRMNINDQNFLKVSNPMTENYEYIRASIIPNLLKSESVSSNFPYPHKIFEIGKVALKNLDTTEGTSTFTNLAF LMSGKEISFNEINSIVATLFYYLNIEINLIESKTTFYINGRGADIVIEGFNIGGFGEISPYVLNNFGIFIPCSVFEVNIN KLMSRS >Mature_565_residues PKLEIYKNLFLDKIGKNFTNLEISELLEPFKAEFDGFDESSGKIKIEFNDTNRPDLWSYLGLARQIKTYFFGEMPYYDFF SKKGDFKKFYGEILVDGKMSQIRPFIFGFLAKGLIINDKMLETLIQFQEKLCQNYGQKRRRIAMGMYNSNFIKFPISYIA SSPNHKFVPFGMDYELSLLEINEKHPKGLEYSHIIKNFDKFPLLLDDNNNVVSYPPIINSNNIGSLKVGDTDLFVEVTGI DFEATLLALSIAACDFYDMGFEILPVKTVFREPFNLDFKELVCPYYFQEEVEFNVENINRLLGSNLTLERICLSLKKMGV NSYSKDFKNYIVPPFYRNDFLHEVDVIEDVMIGEGLSSFNPELPKAFAVGRLSPLEEFSRNVRNLMVGMGFQEMIYNYMG SKKDFIDRMNINDQNFLKVSNPMTENYEYIRASIIPNLLKSESVSSNFPYPHKIFEIGKVALKNLDTTEGTSTFTNLAFL MSGKEISFNEINSIVATLFYYLNIEINLIESKTTFYINGRGADIVIEGFNIGGFGEISPYVLNNFGIFIPCSVFEVNINK LMSRS
Specific function: Unknown
COG id: COG0072
COG function: function code J; Phenylalanyl-tRNA synthetase beta subunit
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 B5 domain [H]
Homologues:
Organism=Homo sapiens, GI124028525, Length=598, Percent_Identity=26.0869565217391, Blast_Score=212, Evalue=8e-55, Organism=Caenorhabditis elegans, GI17533403, Length=601, Percent_Identity=27.7870216306156, Blast_Score=196, Evalue=2e-50, Organism=Saccharomyces cerevisiae, GI6323089, Length=605, Percent_Identity=25.6198347107438, Blast_Score=167, Evalue=5e-42, Organism=Drosophila melanogaster, GI21355211, Length=599, Percent_Identity=23.873121869783, Blast_Score=184, Evalue=1e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005146 - InterPro: IPR005147 - InterPro: IPR009061 - InterPro: IPR004531 - InterPro: IPR022918 - InterPro: IPR002319 [H]
Pfam domain/function: PF03484 B5; PF01409 tRNA-synt_2d [H]
EC number: =6.1.1.20 [H]
Molecular weight: Translated: 65175; Mature: 65044
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKLEIYKNLFLDKIGKNFTNLEISELLEPFKAEFDGFDESSGKIKIEFNDTNRPDLWSY CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHH LGLARQIKTYFFGEMPYYDFFSKKGDFKKFYGEILVDGKMSQIRPFIFGFLAKGLIINDK HHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHEECCCHHHHHHHHHHHHHCCEEECHH MLETLIQFQEKLCQNYGQKRRRIAMGMYNSNFIKFPISYIASSPNHKFVPFGMDYELSLL HHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEEHHHHCCCCCCEEEEECCCCEEEEE EINEKHPKGLEYSHIIKNFDKFPLLLDDNNNVVSYPPIINSNNIGSLKVGDTDLFVEVTG EECCCCCCCCCHHHHHHCCCCCCEEECCCCCEEECCCEECCCCCCEEEECCCEEEEEEEC IDFEATLLALSIAACDFYDMGFEILPVKTVFREPFNLDFKELVCPYYFQEEVEFNVENIN CCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHCCCCCCCHHHHHCCHHHHHHHEECHHHHH RLLGSNLTLERICLSLKKMGVNSYSKDFKNYIVPPFYRNDFLHEVDVIEDVMIGEGLSSF HHHCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHC NPELPKAFAVGRLSPLEEFSRNVRNLMVGMGFQEMIYNYMGSKKDFIDRMNINDQNFLKV CCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHCCCCCCCEEEE SNPMTENYEYIRASIIPNLLKSESVSSNFPYPHKIFEIGKVALKNLDTTEGTSTFTNLAF CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHH LMSGKEISFNEINSIVATLFYYLNIEINLIESKTTFYINGRGADIVIEGFNIGGFGEISP EECCCCCCHHHHHHHHHHHHHHEEEEEEEEECCEEEEEECCCCEEEEECCCCCCCCCCCC YVLNNFGIFIPCSVFEVNINKLMSRS CEECCCCEEEEEEEEEEEHHHHHCCC >Mature Secondary Structure PKLEIYKNLFLDKIGKNFTNLEISELLEPFKAEFDGFDESSGKIKIEFNDTNRPDLWSY CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHH LGLARQIKTYFFGEMPYYDFFSKKGDFKKFYGEILVDGKMSQIRPFIFGFLAKGLIINDK HHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHEECCCHHHHHHHHHHHHHCCEEECHH MLETLIQFQEKLCQNYGQKRRRIAMGMYNSNFIKFPISYIASSPNHKFVPFGMDYELSLL HHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEEHHHHCCCCCCEEEEECCCCEEEEE EINEKHPKGLEYSHIIKNFDKFPLLLDDNNNVVSYPPIINSNNIGSLKVGDTDLFVEVTG EECCCCCCCCCHHHHHHCCCCCCEEECCCCCEEECCCEECCCCCCEEEECCCEEEEEEEC IDFEATLLALSIAACDFYDMGFEILPVKTVFREPFNLDFKELVCPYYFQEEVEFNVENIN CCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHCCCCCCCHHHHHCCHHHHHHHEECHHHHH RLLGSNLTLERICLSLKKMGVNSYSKDFKNYIVPPFYRNDFLHEVDVIEDVMIGEGLSSF HHHCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHC NPELPKAFAVGRLSPLEEFSRNVRNLMVGMGFQEMIYNYMGSKKDFIDRMNINDQNFLKV CCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHCCCCCCCEEEE SNPMTENYEYIRASIIPNLLKSESVSSNFPYPHKIFEIGKVALKNLDTTEGTSTFTNLAF CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHH LMSGKEISFNEINSIVATLFYYLNIEINLIESKTTFYINGRGADIVIEGFNIGGFGEISP EECCCCCCHHHHHHHHHHHHHHEEEEEEEEECCEEEEEECCCCEEEEECCCCCCCCCCCC YVLNNFGIFIPCSVFEVNINKLMSRS CEECCCCEEEEEEEEEEEHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA