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The map label for this gene is oppC [H]

Identifier: 15594678

GI number: 15594678

Start: 341274

End: 342323

Strand: Direct

Name: oppC [H]

Synonym: BB0333

Alternate gene names: 15594678

Gene position: 341274-342323 (Clockwise)

Preceding gene: 15594677

Following gene: 15594679

Centisome position: 37.47

GC content: 31.52

Gene sequence:

>1050_bases
ATGAATAGCCTTGAAAAACAAAATGAAGAAAACAATTCTAAACTAGAAAGAAGAGCTTGGTCAAGATTTAAAGAAAATAA
ACTCGCATTTGGCAGTCTTTTTGTAATTGGATTTTATATCTCAATTGCCATTTTGCAACCAATATTGCCAATATATAAAT
ACCATACTCAAATAGTAGAGCATTCTGATTTGCCACCATCTTTCCAGGCTGCTGGAGAACTCTGGTATAATAAAGAAAAA
AAATTTATTGAAAAATTAGCAAAAAAAGAAAAAAGAGAAATAAATGAAGAAGAACTAAAAAAACTCGAAGACATAAAAAG
AAAAATAGAAAATGAAGTTCAAATAATAGATAAAAAGGAAGTAAAAATACATAAAAGAGTATATTTGCTTGGCACAGACA
ATCTTGGAAGAGATCTGCTTGCAAGATTAATACAAGGTAGTCAAATTTCTCTTTCTGTAGGATTTATTGGAGCTTTTTTG
TCTATGATAATAGGAACTATCCTGGGATCCATAGCAGGATTTTTTGGGGGATTGCCCGACAAAATAATAACTAAAACAAT
AGAAATTCTTTATGCATTGCCCTATTTACTTATTGTAATAATATTAATGGCAATAATGGAAAGAAGTATAATCGGCTTAT
TCATAGCACTTGCATTTGTATCATGGTTAACAGTAGCTCGAGTTGTACGAGGCCAAGTACAATCACTATCAAGTTCGGAA
TTTATACAAGCAGCCAAAACCCTTGGTGCAACAAATCAAAGAATAATCTTAAAACACTTGATCCCTAATAGCATTGGAAT
GATAGTTATATTCACAACAATAAGGGTTCCAAGCTTTATTATGGCTGAAGCATTTTTATCCTTTTTAGGACTTGGAATTT
CAGCTCCAATGACAAGCTGGGGAGAATTAGTGCAAAATGGAATTGCTACATTTGTTGAATATCCATGGAAAGTTTTTATT
CCAGCTATAGTTATGACAATATTTCTATTATTTATGAACTTTTTAGGTGATGGGCTAAGGGATGCTTTTGATCCAAAAGA
TAGCATCTAA

Upstream 100 bases:

>100_bases
GGGCGGATTGTTAGTATATTCAATAATACTGCTTATTTCTATATTAATATCAGATATTATATATAAAATATTAGATCCAA
GAGTATAAGGGGAAATCAAA

Downstream 100 bases:

>100_bases
GGAGAAATTGAATGGAAAAAGAAAATATATTGGAAATAAAAAATTTAACAATTGAATTTAGATTAAAACATACAACAATT
CATCCCGTAAGCAATGTTAA

Product: peptide ABC transporter permease

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: Stage 0 sporulation protein KC [H]

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MNSLEKQNEENNSKLERRAWSRFKENKLAFGSLFVIGFYISIAILQPILPIYKYHTQIVEHSDLPPSFQAAGELWYNKEK
KFIEKLAKKEKREINEEELKKLEDIKRKIENEVQIIDKKEVKIHKRVYLLGTDNLGRDLLARLIQGSQISLSVGFIGAFL
SMIIGTILGSIAGFFGGLPDKIITKTIEILYALPYLLIVIILMAIMERSIIGLFIALAFVSWLTVARVVRGQVQSLSSSE
FIQAAKTLGATNQRIILKHLIPNSIGMIVIFTTIRVPSFIMAEAFLSFLGLGISAPMTSWGELVQNGIATFVEYPWKVFI
PAIVMTIFLLFMNFLGDGLRDAFDPKDSI

Sequences:

>Translated_349_residues
MNSLEKQNEENNSKLERRAWSRFKENKLAFGSLFVIGFYISIAILQPILPIYKYHTQIVEHSDLPPSFQAAGELWYNKEK
KFIEKLAKKEKREINEEELKKLEDIKRKIENEVQIIDKKEVKIHKRVYLLGTDNLGRDLLARLIQGSQISLSVGFIGAFL
SMIIGTILGSIAGFFGGLPDKIITKTIEILYALPYLLIVIILMAIMERSIIGLFIALAFVSWLTVARVVRGQVQSLSSSE
FIQAAKTLGATNQRIILKHLIPNSIGMIVIFTTIRVPSFIMAEAFLSFLGLGISAPMTSWGELVQNGIATFVEYPWKVFI
PAIVMTIFLLFMNFLGDGLRDAFDPKDSI
>Mature_349_residues
MNSLEKQNEENNSKLERRAWSRFKENKLAFGSLFVIGFYISIAILQPILPIYKYHTQIVEHSDLPPSFQAAGELWYNKEK
KFIEKLAKKEKREINEEELKKLEDIKRKIENEVQIIDKKEVKIHKRVYLLGTDNLGRDLLARLIQGSQISLSVGFIGAFL
SMIIGTILGSIAGFFGGLPDKIITKTIEILYALPYLLIVIILMAIMERSIIGLFIALAFVSWLTVARVVRGQVQSLSSSE
FIQAAKTLGATNQRIILKHLIPNSIGMIVIFTTIRVPSFIMAEAFLSFLGLGISAPMTSWGELVQNGIATFVEYPWKVFI
PAIVMTIFLLFMNFLGDGLRDAFDPKDSI

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane. Also required for sporulation and competence [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787498, Length=220, Percent_Identity=43.1818181818182, Blast_Score=177, Evalue=7e-46,
Organism=Escherichia coli, GI1787054, Length=219, Percent_Identity=38.3561643835616, Blast_Score=171, Evalue=8e-44,
Organism=Escherichia coli, GI1787760, Length=219, Percent_Identity=32.8767123287671, Blast_Score=137, Evalue=1e-33,
Organism=Escherichia coli, GI1788505, Length=353, Percent_Identity=23.7960339943343, Blast_Score=123, Evalue=2e-29,
Organism=Escherichia coli, GI1789964, Length=219, Percent_Identity=37.4429223744292, Blast_Score=122, Evalue=5e-29,
Organism=Escherichia coli, GI1789889, Length=219, Percent_Identity=29.6803652968037, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI1787549, Length=229, Percent_Identity=29.2576419213974, Blast_Score=105, Evalue=3e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 39418; Mature: 39418

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSLEKQNEENNSKLERRAWSRFKENKLAFGSLFVIGFYISIAILQPILPIYKYHTQIVE
CCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HSDLPPSFQAAGELWYNKEKKFIEKLAKKEKREINEEELKKLEDIKRKIENEVQIIDKKE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VKIHKRVYLLGTDNLGRDLLARLIQGSQISLSVGFIGAFLSMIIGTILGSIAGFFGGLPD
HHHHHEEEEEECCCCCHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
KIITKTIEILYALPYLLIVIILMAIMERSIIGLFIALAFVSWLTVARVVRGQVQSLSSSE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
FIQAAKTLGATNQRIILKHLIPNSIGMIVIFTTIRVPSFIMAEAFLSFLGLGISAPMTSW
HHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
GELVQNGIATFVEYPWKVFIPAIVMTIFLLFMNFLGDGLRDAFDPKDSI
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCC
>Mature Secondary Structure
MNSLEKQNEENNSKLERRAWSRFKENKLAFGSLFVIGFYISIAILQPILPIYKYHTQIVE
CCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HSDLPPSFQAAGELWYNKEKKFIEKLAKKEKREINEEELKKLEDIKRKIENEVQIIDKKE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VKIHKRVYLLGTDNLGRDLLARLIQGSQISLSVGFIGAFLSMIIGTILGSIAGFFGGLPD
HHHHHEEEEEECCCCCHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
KIITKTIEILYALPYLLIVIILMAIMERSIIGLFIALAFVSWLTVARVVRGQVQSLSSSE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
FIQAAKTLGATNQRIILKHLIPNSIGMIVIFTTIRVPSFIMAEAFLSFLGLGISAPMTSW
HHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
GELVQNGIATFVEYPWKVFIPAIVMTIFLLFMNFLGDGLRDAFDPKDSI
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1901616; 1899858; 9384377 [H]