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The map label for this gene is yebA [H]

Identifier: 15594600

GI number: 15594600

Start: 266095

End: 267051

Strand: Direct

Name: yebA [H]

Synonym: BB0255

Alternate gene names: 15594600

Gene position: 266095-267051 (Clockwise)

Preceding gene: 15594599

Following gene: 15594601

Centisome position: 29.22

GC content: 28.74

Gene sequence:

>957_bases
ATGCTCAAATCAATGTATAGAATACAAAAAGCCCTACTTATACTGTGTATTCTAGGAATAGAAAATATAAATTCAGAAAT
AATAAATACTATTCCTAAAGTCCAATATAAAAAAGAGGCATTTCAAGGAGATTACATATACTTTGCAAGTAATCAAAACT
TTAAAAGTTTATCACTTTTAAGCACAAATAAAAATCCAATCATAAGCTCTTCTCCGTTTAAATTTACAGTAGGAAGTAAA
ATTTACTACATAGCACTTATGGGAATTACACCAATGATAAAAGAAGGTAAAAGAAAAATTCAAATAGAATTTGAAAATAA
AAGCTACATCAAAGAAATAGAAATAAAAAAATTTCACTTCAAAAAAACAAAAATTAGTTTTAATAAAGAAAAAGCCAAGC
TTATCACCCAAAAAAAATCAACAAAACAAAAAGAACAGGCTTTGGTTTTGTGGAATATTATTGGCAATACTGGAGACACA
ACAATATACCACTACGATGCTTTAGTCAAACCAATAAAAGATCAATACATTGTAACAAGCCTATACGGAGATTTAAGACT
TTACATGCAAGGTGACAAAAAAATTTCAAATTATACAATGCACAATGGAATTGATTATGCCCCATTTAAAAGAGAAAATA
CTCCGATTTTTGCTGCTGGCAAAGGAAAAGTTGTGTTTGCACAAAATAGAGAGCTAACAGGCAATACCCTTATAATACAA
CATTTACCGGGAGTATTTACAATTTATCTTCACCTCTCAAAATTGGGAATAAGTGAAAATAAAATAGTTAGTGCTGGGGA
ATATATTGGACATACTGGAAATACAGGCCTTTCAACAGGCCCTCATTTACACTTTGAAGTAAGAATTAATGGCATAGCAA
TAAACCCAGATTTCCTTTTAAATGGCATGCTTATTGACAAAAATAAAATAATAAATAATATTAAAAGAATAGAATAA

Upstream 100 bases:

>100_bases
GATATAAAAGAAGATCAATATTTAGACATCATTTTTACAGTTAATGAAGATTTTTATTATCCTAGAGAAAAAATTTTGAA
AATCATAGACATAAAAAAGA

Downstream 100 bases:

>100_bases
AAGGAGGTGATTTTTTGGTAACAGTCACTGTGGACAAAAATGAAAATCTTGAAAAAGCATTGAAACGTTTTAAAAGAATG
ATTGAAAAAGAAGCAATTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MLKSMYRIQKALLILCILGIENINSEIINTIPKVQYKKEAFQGDYIYFASNQNFKSLSLLSTNKNPIISSSPFKFTVGSK
IYYIALMGITPMIKEGKRKIQIEFENKSYIKEIEIKKFHFKKTKISFNKEKAKLITQKKSTKQKEQALVLWNIIGNTGDT
TIYHYDALVKPIKDQYIVTSLYGDLRLYMQGDKKISNYTMHNGIDYAPFKRENTPIFAAGKGKVVFAQNRELTGNTLIIQ
HLPGVFTIYLHLSKLGISENKIVSAGEYIGHTGNTGLSTGPHLHFEVRINGIAINPDFLLNGMLIDKNKIINNIKRIE

Sequences:

>Translated_318_residues
MLKSMYRIQKALLILCILGIENINSEIINTIPKVQYKKEAFQGDYIYFASNQNFKSLSLLSTNKNPIISSSPFKFTVGSK
IYYIALMGITPMIKEGKRKIQIEFENKSYIKEIEIKKFHFKKTKISFNKEKAKLITQKKSTKQKEQALVLWNIIGNTGDT
TIYHYDALVKPIKDQYIVTSLYGDLRLYMQGDKKISNYTMHNGIDYAPFKRENTPIFAAGKGKVVFAQNRELTGNTLIIQ
HLPGVFTIYLHLSKLGISENKIVSAGEYIGHTGNTGLSTGPHLHFEVRINGIAINPDFLLNGMLIDKNKIINNIKRIE
>Mature_318_residues
MLKSMYRIQKALLILCILGIENINSEIINTIPKVQYKKEAFQGDYIYFASNQNFKSLSLLSTNKNPIISSSPFKFTVGSK
IYYIALMGITPMIKEGKRKIQIEFENKSYIKEIEIKKFHFKKTKISFNKEKAKLITQKKSTKQKEQALVLWNIIGNTGDT
TIYHYDALVKPIKDQYIVTSLYGDLRLYMQGDKKISNYTMHNGIDYAPFKRENTPIFAAGKGKVVFAQNRELTGNTLIIQ
HLPGVFTIYLHLSKLGISENKIVSAGEYIGHTGNTGLSTGPHLHFEVRINGIAINPDFLLNGMLIDKNKIINNIKRIE

Specific function: Could be involved in cell wall degradation or formation [H]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=96, Percent_Identity=41.6666666666667, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR013731
- InterPro:   IPR016047
- InterPro:   IPR002886
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM; PF08525 OapA_N; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 36235; Mature: 36235

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKSMYRIQKALLILCILGIENINSEIINTIPKVQYKKEAFQGDYIYFASNQNFKSLSLL
CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEHHHHCCCCEEEEECCCCCCEEEEE
STNKNPIISSSPFKFTVGSKIYYIALMGITPMIKEGKRKIQIEFENKSYIKEIEIKKFHF
ECCCCCCCCCCCEEEEECCEEEEEEEECCCHHHHCCCEEEEEEECCCCCEEEEEEEEEEE
KKTKISFNKEKAKLITQKKSTKQKEQALVLWNIIGNTGDTTIYHYDALVKPIKDQYIVTS
EEEEEECCHHHHHHHHHHHHCCHHHCEEEEEEEECCCCCCEEEEEHHHHCCCCCCEEEEE
LYGDLRLYMQGDKKISNYTMHNGIDYAPFKRENTPIFAAGKGKVVFAQNRELTGNTLIIQ
EECCEEEEEECCCEECCEEECCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCEEEEE
HLPGVFTIYLHLSKLGISENKIVSAGEYIGHTGNTGLSTGPHLHFEVRINGIAINPDFLL
CCCCEEEEEEEHHHCCCCCCCEEECCHHCCCCCCCCCCCCCEEEEEEEEEEEEECHHHEE
NGMLIDKNKIINNIKRIE
ECEEEEHHHHHHHHHCCC
>Mature Secondary Structure
MLKSMYRIQKALLILCILGIENINSEIINTIPKVQYKKEAFQGDYIYFASNQNFKSLSLL
CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEHHHHCCCCEEEEECCCCCCEEEEE
STNKNPIISSSPFKFTVGSKIYYIALMGITPMIKEGKRKIQIEFENKSYIKEIEIKKFHF
ECCCCCCCCCCCEEEEECCEEEEEEEECCCHHHHCCCEEEEEEECCCCCEEEEEEEEEEE
KKTKISFNKEKAKLITQKKSTKQKEQALVLWNIIGNTGDTTIYHYDALVKPIKDQYIVTS
EEEEEECCHHHHHHHHHHHHCCHHHCEEEEEEEECCCCCCEEEEEHHHHCCCCCCEEEEE
LYGDLRLYMQGDKKISNYTMHNGIDYAPFKRENTPIFAAGKGKVVFAQNRELTGNTLIIQ
EECCEEEEEECCCEECCEEECCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCEEEEE
HLPGVFTIYLHLSKLGISENKIVSAGEYIGHTGNTGLSTGPHLHFEVRINGIAINPDFLL
CCCCEEEEEEEHHHCCCCCCCEEECCHHCCCCCCCCCCCCCEEEEEEEEEEEEECHHHEE
NGMLIDKNKIINNIKRIE
ECEEEEHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]