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The map label for this gene is gerAA

Identifier: 255767754

GI number: 255767754

Start: 3390782

End: 3392230

Strand: Direct

Name: gerAA

Synonym: BSU33050

Alternate gene names: 255767754

Gene position: 3390782-3392230 (Clockwise)

Preceding gene: 16080356

Following gene: 16080359

Centisome position: 80.43

GC content: 44.17

Gene sequence:

>1449_bases
TTGGAACAAACAGAGTTTAAGGAATATATACACGATAATTTAGCATTGGTGCTGCCAAAATTAAAAGAAAACGATGATCT
GGTGAAAAACAAAAAAATGCTTGCGAACGGACTGGTTTTTTACTATCTCTATTTCAGTGAAATGACTGATGAGAATAAGG
TGTCAGAAGCCATTAAAACTTTGATTAAAGATGAGGAGACCTTAACGCTTGACCAGGTCAAAAAACGCCTTGACCAGCTT
GACGCAAGACCTGTTGAAACTGCAAAAAAAACGATTGAATCGATTCTCAACGGCAATTGTGCTGTGTTTATCAACGGATT
GGATAAAGCCTATATTCTGACCACAGGAAAGAAAAAAACAAGAAGCCTGACAGAGCCGACAACTGAAAAAGTGGTTCGCG
GCCCAAAAGTAGCGTTTGTAGAGGATATTGATACAAATCTCGCTCTGATCAGACAAAGAACCTCTCATCCGAAATTGATC
ACCAAAAAAATCATGATCGGCGAAAACAAGCTGAAGCCTGCAGCCATTATGTACATTGAAGGCAAAGCAAAAAAGTCCGT
CATAAAAGAAGTGAAGGCGCGGCTTAAAAATATCCAGCTGGAAGATATCCAGGACAGCGGAACGCTCGAGGAGCTCATTG
AAGATAATAAATATTCACCATTTCCGCAGATACAAAATACGGAAAGACCTGACAAAGTATCTTCAGCCCTGTTTAACGGC
CGTGTGGCAATTTTGGTCGACAGTTCACCATTTGTGCTGCTGGTGCCGGTTTCTCTCGGCATCCTGATGCAATCCCCGGA
TGACTACTATGAACGCTGGATTTCAGCATCTCTTATCCGGTCGCTGCGCTTTGCTTCTATCTTTATCACCTTGTTTTTGT
CATCGATTTATATAACACTTGTTTCCTTCCATCAGGGGCTGCTGCCGACCGCACTCGCCGTCACGATTTCGGCGAACAGG
GAAAACGTGCCGTTCCCTCCGATATTTGAAGCCCTGCTGATGGAAGTCACCATCGAGCTGCTAAGGGAAGCCGGACTGCG
ACTCCCCAATCCGCTCGGACAGACGATCGGCCTCGTTGGGGGCGTAGTCATCGGACAGGCTGCTGTAGAAGCGAATCTCG
TCAGTTCGATTTTGGTCATTGTCGTCAGTGTCATTGCCCTGGCATCCTTTACCGTTCCTCAATACGGAATGGGTCTGTCT
TTCCGGGTGCTGCGTTTTATTTCGATGTTTTCCGCCGCTATTTTAGGGCTATACGGCATTATTTTATTTATGCTTGTCGT
TTATACGCACTTAACGAGACAAACGAGCTTTGGGTCTCCGTATTTTTCGCCAAACGGATTCTTTAGCCTGAAAAATACGG
ATGACTCCATTATCCGTCTCCCAATTAAAAACAAACCAAAAGAGGTGAATAATCCAAATGAGCCAAAAACAGACTCCACT
GAAACTTAA

Upstream 100 bases:

>100_bases
CATAAAAAAACTTACTCCATGAAATACTCTAACACAGTATATCATTTTTTTAACAGGAAAAGATAACCTCTACTAAGGTT
TTGGATAAGAGGTGACCTCA

Downstream 100 bases:

>100_bases
TACCTTTCAAGGTATTTCTATTGTTGCAAATACAATGCTTGGGGCCGGACTTTTAACATTGCCGCGAGCGCTGACCACTA
AGGCTAATACGCCTGACGGC

Product: GerA germination receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 482; Mature: 482

Protein sequence:

>482_residues
MEQTEFKEYIHDNLALVLPKLKENDDLVKNKKMLANGLVFYYLYFSEMTDENKVSEAIKTLIKDEETLTLDQVKKRLDQL
DARPVETAKKTIESILNGNCAVFINGLDKAYILTTGKKKTRSLTEPTTEKVVRGPKVAFVEDIDTNLALIRQRTSHPKLI
TKKIMIGENKLKPAAIMYIEGKAKKSVIKEVKARLKNIQLEDIQDSGTLEELIEDNKYSPFPQIQNTERPDKVSSALFNG
RVAILVDSSPFVLLVPVSLGILMQSPDDYYERWISASLIRSLRFASIFITLFLSSIYITLVSFHQGLLPTALAVTISANR
ENVPFPPIFEALLMEVTIELLREAGLRLPNPLGQTIGLVGGVVIGQAAVEANLVSSILVIVVSVIALASFTVPQYGMGLS
FRVLRFISMFSAAILGLYGIILFMLVVYTHLTRQTSFGSPYFSPNGFFSLKNTDDSIIRLPIKNKPKEVNNPNEPKTDST
ET

Sequences:

>Translated_482_residues
MEQTEFKEYIHDNLALVLPKLKENDDLVKNKKMLANGLVFYYLYFSEMTDENKVSEAIKTLIKDEETLTLDQVKKRLDQL
DARPVETAKKTIESILNGNCAVFINGLDKAYILTTGKKKTRSLTEPTTEKVVRGPKVAFVEDIDTNLALIRQRTSHPKLI
TKKIMIGENKLKPAAIMYIEGKAKKSVIKEVKARLKNIQLEDIQDSGTLEELIEDNKYSPFPQIQNTERPDKVSSALFNG
RVAILVDSSPFVLLVPVSLGILMQSPDDYYERWISASLIRSLRFASIFITLFLSSIYITLVSFHQGLLPTALAVTISANR
ENVPFPPIFEALLMEVTIELLREAGLRLPNPLGQTIGLVGGVVIGQAAVEANLVSSILVIVVSVIALASFTVPQYGMGLS
FRVLRFISMFSAAILGLYGIILFMLVVYTHLTRQTSFGSPYFSPNGFFSLKNTDDSIIRLPIKNKPKEVNNPNEPKTDST
ET
>Mature_482_residues
MEQTEFKEYIHDNLALVLPKLKENDDLVKNKKMLANGLVFYYLYFSEMTDENKVSEAIKTLIKDEETLTLDQVKKRLDQL
DARPVETAKKTIESILNGNCAVFINGLDKAYILTTGKKKTRSLTEPTTEKVVRGPKVAFVEDIDTNLALIRQRTSHPKLI
TKKIMIGENKLKPAAIMYIEGKAKKSVIKEVKARLKNIQLEDIQDSGTLEELIEDNKYSPFPQIQNTERPDKVSSALFNG
RVAILVDSSPFVLLVPVSLGILMQSPDDYYERWISASLIRSLRFASIFITLFLSSIYITLVSFHQGLLPTALAVTISANR
ENVPFPPIFEALLMEVTIELLREAGLRLPNPLGQTIGLVGGVVIGQAAVEANLVSSILVIVVSVIALASFTVPQYGMGLS
FRVLRFISMFSAAILGLYGIILFMLVVYTHLTRQTSFGSPYFSPNGFFSLKNTDDSIIRLPIKNKPKEVNNPNEPKTDST
ET

Specific function: Forms a complex at the inner spore membrane which acts as a receptor for L-alanine, thus is involved in the stimulation of germination in response to alanine. Can stimulate germination in the absence of gerD and gerK gene products (fructose and glucose re

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerABKA family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GERAA_BACSU (P07868)

Other databases:

- EMBL:   M11918
- EMBL:   AJ223978
- EMBL:   AL009126
- EMBL:   M16189
- EMBL:   X01701
- PIR:   E69629
- RefSeq:   NP_391185.2
- EnsemblBacteria:   EBBACT00000003572
- GeneID:   935953
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU33050
- NMPDR:   fig|224308.1.peg.3311
- GenoList:   BSU33050
- GeneTree:   EBGT00070000031745
- HOGENOM:   HBG343112
- ProtClustDB:   CLSK887854
- BioCyc:   BSUB:BSU33050-MONOMER
- InterPro:   IPR004995

Pfam domain/function: PF03323 GerA

EC number: NA

Molecular weight: Translated: 53810; Mature: 53810

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x123ae1d4)-; HASH(0x40c0a9e4)-; HASH(0x113739f4)-; HASH(0x12247a74)-; HASH(0x11eee6b4)-; HASH(0x12510b50)-;

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQTEFKEYIHDNLALVLPKLKENDDLVKNKKMLANGLVFYYLYFSEMTDENKVSEAIKT
CCHHHHHHHHHCCHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
LIKDEETLTLDQVKKRLDQLDARPVETAKKTIESILNGNCAVFINGLDKAYILTTGKKKT
HHCCCCCEEHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEECCCCEEEEECCCHHH
RSLTEPTTEKVVRGPKVAFVEDIDTNLALIRQRTSHPKLITKKIMIGENKLKPAAIMYIE
CCCCCCHHHHHHCCCCEEEECCCCCHHHHHHHCCCCCHHHHHHHHCCCCCCCCEEEEEEE
GKAKKSVIKEVKARLKNIQLEDIQDSGTLEELIEDNKYSPFPQIQNTERPDKVSSALFNG
CCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCC
RVAILVDSSPFVLLVPVSLGILMQSPDDYYERWISASLIRSLRFASIFITLFLSSIYITL
EEEEEECCCCCEEEEECCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSFHQGLLPTALAVTISANRENVPFPPIFEALLMEVTIELLREAGLRLPNPLGQTIGLVG
HHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
GVVIGQAAVEANLVSSILVIVVSVIALASFTVPQYGMGLSFRVLRFISMFSAAILGLYGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ILFMLVVYTHLTRQTSFGSPYFSPNGFFSLKNTDDSIIRLPIKNKPKEVNNPNEPKTDST
HHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCC
ET
CH
>Mature Secondary Structure
MEQTEFKEYIHDNLALVLPKLKENDDLVKNKKMLANGLVFYYLYFSEMTDENKVSEAIKT
CCHHHHHHHHHCCHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
LIKDEETLTLDQVKKRLDQLDARPVETAKKTIESILNGNCAVFINGLDKAYILTTGKKKT
HHCCCCCEEHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEECCCCEEEEECCCHHH
RSLTEPTTEKVVRGPKVAFVEDIDTNLALIRQRTSHPKLITKKIMIGENKLKPAAIMYIE
CCCCCCHHHHHHCCCCEEEECCCCCHHHHHHHCCCCCHHHHHHHHCCCCCCCCEEEEEEE
GKAKKSVIKEVKARLKNIQLEDIQDSGTLEELIEDNKYSPFPQIQNTERPDKVSSALFNG
CCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCC
RVAILVDSSPFVLLVPVSLGILMQSPDDYYERWISASLIRSLRFASIFITLFLSSIYITL
EEEEEECCCCCEEEEECCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSFHQGLLPTALAVTISANRENVPFPPIFEALLMEVTIELLREAGLRLPNPLGQTIGLVG
HHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
GVVIGQAAVEANLVSSILVIVVSVIALASFTVPQYGMGLSFRVLRFISMFSAAILGLYGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ILFMLVVYTHLTRQTSFGSPYFSPNGFFSLKNTDDSIIRLPIKNKPKEVNNPNEPKTDST
HHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCC
ET
CH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2998952; 9639930; 9384377; 3110007; 3923430