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The map label for this gene is yvpB

Identifier: 16080547

GI number: 16080547

Start: 3589611

End: 3590363

Strand: Direct

Name: yvpB

Synonym: BSU34940

Alternate gene names: 16080547

Gene position: 3589611-3590363 (Clockwise)

Preceding gene: 255767771

Following gene: 16080548

Centisome position: 85.15

GC content: 44.09

Gene sequence:

>753_bases
ATGAAAACACTGCGAACTCTATGTGTCCTGATGATTCTTTCAGGCGTTATTTTTTTCGGACTTAAAATAGATGCAAAAGA
TATAGATATTCCTTTTTTGAACAGCCTTAAAAAAGTGGTTTCTGATAGCGATACAGACTCAGCTGCGAATAGCAAAAAGG
AGCTGAAGGGAAGCGCAAAACCGCTGGATGTCATCCTTTACAATCAAATGGACGCACCCCGGCTCTATAACGGCTGTGAA
GTAACAAGCCTTGCGATGGTGCTGAATTATGCGGGATACGACGTGACAAAAAATACCCTGGCAAATCAGGTTGCCACAGT
GCCTTTGACATACAGCAGCGGATTAAAGGGTGATCCGAATGACGGATTTGTCGGGGATATGGCGAATGGCCCTGGTCTCG
GTGTCTACCATCGACCGATCTATCAGCTGGCGAAAACCTATGCGGGAGACAAAGTGTCTGATCTGACTGGAAAAAGTATT
TCCGCTGTTTATCAGCAGCTTGAAAAAGGCAATCCAGTTTGGGTTATTACGACAGCCAACTTTACGCCAGTTGACAACAT
GCAGACATGGAAAACGCCAAACGGAACGATAGAAATTACGTACAGCGAACACAGCGTCGCCGTTACGGGATATGATGATA
AATATGTGTATCTCAATGATCCGTATGGCTATAAAAACAGAAAAACCGATAGAACAAGCTTTGAAAAAGCGTGGAAACAA
ATGGGCAGCCAGGCCGTGGTTATTCAAAAGTAA

Upstream 100 bases:

>100_bases
TGAAAAAATCATGAATAATGTATTAAAGGTACGTAATATCTCAAATTCTTTATGTTTGGCATGCTATAATACAAATCAAA
TAGAGAACAAGGAGATAAAG

Downstream 100 bases:

>100_bases
ACACCTGAAGCCTCACTATGCTCTATTCTGAGCAAATACGACAATATTCATGCTTTTTGTATCAATCGGTAAGATCGATT
CATTTTCCATTTTTCACCCA

Product: hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MKTLRTLCVLMILSGVIFFGLKIDAKDIDIPFLNSLKKVVSDSDTDSAANSKKELKGSAKPLDVILYNQMDAPRLYNGCE
VTSLAMVLNYAGYDVTKNTLANQVATVPLTYSSGLKGDPNDGFVGDMANGPGLGVYHRPIYQLAKTYAGDKVSDLTGKSI
SAVYQQLEKGNPVWVITTANFTPVDNMQTWKTPNGTIEITYSEHSVAVTGYDDKYVYLNDPYGYKNRKTDRTSFEKAWKQ
MGSQAVVIQK

Sequences:

>Translated_250_residues
MKTLRTLCVLMILSGVIFFGLKIDAKDIDIPFLNSLKKVVSDSDTDSAANSKKELKGSAKPLDVILYNQMDAPRLYNGCE
VTSLAMVLNYAGYDVTKNTLANQVATVPLTYSSGLKGDPNDGFVGDMANGPGLGVYHRPIYQLAKTYAGDKVSDLTGKSI
SAVYQQLEKGNPVWVITTANFTPVDNMQTWKTPNGTIEITYSEHSVAVTGYDDKYVYLNDPYGYKNRKTDRTSFEKAWKQ
MGSQAVVIQK
>Mature_250_residues
MKTLRTLCVLMILSGVIFFGLKIDAKDIDIPFLNSLKKVVSDSDTDSAANSKKELKGSAKPLDVILYNQMDAPRLYNGCE
VTSLAMVLNYAGYDVTKNTLANQVATVPLTYSSGLKGDPNDGFVGDMANGPGLGVYHRPIYQLAKTYAGDKVSDLTGKSI
SAVYQQLEKGNPVWVITTANFTPVDNMQTWKTPNGTIEITYSEHSVAVTGYDDKYVYLNDPYGYKNRKTDRTSFEKAWKQ
MGSQAVVIQK

Specific function: Unknown

COG id: COG4990

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YVPB_BACSU (O34735)

Other databases:

- EMBL:   AF017113
- EMBL:   AL009126
- PIR:   B70045
- RefSeq:   NP_391374.1
- ProteinModelPortal:   O34735
- SMR:   O34735
- EnsemblBacteria:   EBBACT00000001034
- GeneID:   936591
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU34940
- NMPDR:   fig|224308.1.peg.3500
- GenoList:   BSU34940
- GeneTree:   EBGT00050000000330
- HOGENOM:   HBG337626
- OMA:   PGLGVYH
- ProtClustDB:   CLSK2393402
- BioCyc:   BSUB:BSU34940-MONOMER
- InterPro:   IPR016997
- PIRSF:   PIRSF032442

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27512; Mature: 27512

Theoretical pI: Translated: 8.54; Mature: 8.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLRTLCVLMILSGVIFFGLKIDAKDIDIPFLNSLKKVVSDSDTDSAANSKKELKGSAK
CCHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHCCCCCCHHHCCHHHHCCCCC
PLDVILYNQMDAPRLYNGCEVTSLAMVLNYAGYDVTKNTLANQVATVPLTYSSGLKGDPN
CEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHEEEEEEECCCCCCCCC
DGFVGDMANGPGLGVYHRPIYQLAKTYAGDKVSDLTGKSISAVYQQLEKGNPVWVITTAN
CCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHCCCCEEEEEECC
FTPVDNMQTWKTPNGTIEITYSEHSVAVTGYDDKYVYLNDPYGYKNRKTDRTSFEKAWKQ
CCCCCCCCCCCCCCCEEEEEECCCEEEEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHH
MGSQAVVIQK
CCCCEEEEEC
>Mature Secondary Structure
MKTLRTLCVLMILSGVIFFGLKIDAKDIDIPFLNSLKKVVSDSDTDSAANSKKELKGSAK
CCHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHCCCCCCHHHCCHHHHCCCCC
PLDVILYNQMDAPRLYNGCEVTSLAMVLNYAGYDVTKNTLANQVATVPLTYSSGLKGDPN
CEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHEEEEEEECCCCCCCCC
DGFVGDMANGPGLGVYHRPIYQLAKTYAGDKVSDLTGKSISAVYQQLEKGNPVWVITTAN
CCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHCCCCEEEEEECC
FTPVDNMQTWKTPNGTIEITYSEHSVAVTGYDDKYVYLNDPYGYKNRKTDRTSFEKAWKQ
CCCCCCCCCCCCCCCEEEEEECCCEEEEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHH
MGSQAVVIQK
CCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377