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The map label for this gene is yvdR

Identifier: 16080503

GI number: 16080503

Start: 3541823

End: 3542143

Strand: Direct

Name: yvdR

Synonym: BSU34500

Alternate gene names: 16080503

Gene position: 3541823-3542143 (Clockwise)

Preceding gene: 16080502

Following gene: 16080506

Centisome position: 84.02

GC content: 47.66

Gene sequence:

>321_bases
ATGGCATGGTTTTTATTAGTGATTGCCGGCATAGAAGAAATTATAGCTGCCATTGCCATGAAATATATAGACGGAACAAG
AAAAAAATGGCCGATCATTGTGATGACTGTTGGATTCGGCTTATCCTTTTACTGCCTGTCCCAAGCGATGATCGTCCTGC
CTGCCGGAGTCGCATATGCCGTCTGGACTGGCATTGGAAGCATTGGTGTTTCGGCGGTCGGGCTCATCTGGTTTAAGGAG
CGGTTTCAGCTTTCACAGGTGATTTCACTTTGCCTTATCCTAGCCGGCGTCATCGGCCTGCGTCTTACGTCATCTTCATA
A

Upstream 100 bases:

>100_bases
CAGCAGCCCAAATGTTCTTTTTAGCTTTATTGCTGGCTGGCATTTTAGGAATGAAATTATTTACGAAAGAAAGCAAATCT
CAGCCGGGAGGTGAAAAATA

Downstream 100 bases:

>100_bases
AATCAAGGCATATACAGCTGTATATGCCTTTGCCATTAAGCTTCGTGATGTTTTTGAAGATGAAGCGGCGGCGGGATGAG
CCAGCCTTTGTTTTTTAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 105

Protein sequence:

>106_residues
MAWFLLVIAGIEEIIAAIAMKYIDGTRKKWPIIVMTVGFGLSFYCLSQAMIVLPAGVAYAVWTGIGSIGVSAVGLIWFKE
RFQLSQVISLCLILAGVIGLRLTSSS

Sequences:

>Translated_106_residues
MAWFLLVIAGIEEIIAAIAMKYIDGTRKKWPIIVMTVGFGLSFYCLSQAMIVLPAGVAYAVWTGIGSIGVSAVGLIWFKE
RFQLSQVISLCLILAGVIGLRLTSSS
>Mature_105_residues
AWFLLVIAGIEEIIAAIAMKYIDGTRKKWPIIVMTVGFGLSFYCLSQAMIVLPAGVAYAVWTGIGSIGVSAVGLIWFKER
FQLSQVISLCLILAGVIGLRLTSSS

Specific function: Suppresses A Groel Mutation And Mimics The Effect Of Groe Overexpression. Could Act As A Chaperone. [C]

COG id: COG2076

COG function: function code P; Membrane transporters of cations and cationic drugs

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small multidrug resistance (SMR) protein family

Homologues:

Organism=Escherichia coli, GI87082378, Length=105, Percent_Identity=39.0476190476191, Blast_Score=79, Evalue=8e-17,
Organism=Escherichia coli, GI1786755, Length=96, Percent_Identity=33.3333333333333, Blast_Score=64, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YVDR_BACSU (O06999)

Other databases:

- EMBL:   Z94043
- EMBL:   AL009126
- PIR:   A70035
- RefSeq:   NP_391330.1
- ProteinModelPortal:   O06999
- EnsemblBacteria:   EBBACT00000002206
- GeneID:   938613
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU34500
- NMPDR:   fig|224308.1.peg.3456
- GenoList:   BSU34500
- GeneTree:   EBGT00050000001579
- HOGENOM:   HBG740972
- OMA:   AGAFEIG
- PhylomeDB:   O06999
- ProtClustDB:   CLSK887924
- BioCyc:   BSUB:BSU34500-MONOMER
- GO:   GO:0006810
- InterPro:   IPR000390

Pfam domain/function: PF00893 Multi_Drug_Res

EC number: NA

Molecular weight: Translated: 11426; Mature: 11295

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x11cbae80)-; HASH(0x122cfa08)-; HASH(0x10c54080)-; HASH(0x40c1b8e0)-;

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAWFLLVIAGIEEIIAAIAMKYIDGTRKKWPIIVMTVGFGLSFYCLSQAMIVLPAGVAYA
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHH
VWTGIGSIGVSAVGLIWFKERFQLSQVISLCLILAGVIGLRLTSSS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
>Mature Secondary Structure 
AWFLLVIAGIEEIIAAIAMKYIDGTRKKWPIIVMTVGFGLSFYCLSQAMIVLPAGVAYA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHH
VWTGIGSIGVSAVGLIWFKERFQLSQVISLCLILAGVIGLRLTSSS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377