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The map label for this gene is cotR

Identifier: 16080506

GI number: 16080506

Start: 3544642

End: 3545604

Strand: Direct

Name: cotR

Synonym: BSU34530

Alternate gene names: 16080506

Gene position: 3544642-3545604 (Clockwise)

Preceding gene: 16080503

Following gene: 16080507

Centisome position: 84.08

GC content: 44.76

Gene sequence:

>963_bases
TTGGCAAAATATCGGATTATGACCTTTGACGGCGGCGGTACCTTAGGTGCTTTAAGTTTACAACTATTAAACAGATTGGC
TAGGCAAAACCCGAAGTTAATTAGTCGAACCCATGTATTTTCGGGAAATTCAATCGGTTCATTTACTGCCCTTGCATTAG
CAAGCGGAAGATCTCCGAGGGAAACACTTCAGTATTTTGAGGATGAAATCCTACCCGCATTCAGCATTTCCCGGCCAGGC
GGACCTGTTTTCAACCAACAATTACCCTATTCCGGTTTTATTAAAGCGGTAAGAAATTTTTTCCCAGCAGATCTTCAACT
TATAGATTTAAGAAAACGAATTGTTGTCCCATCATTCAAATTATACTCTCAAAAACTGGACCGTTGGACTCCTGTCTTAT
TTCACAATTTTCCCGGCTCTCCCTATTTAAATGAAAAAGTGAGTGATGTCATACTGCGGAGCAGCGGTGCTCCCGCGACG
CAACGCGCCTATCAAAACTATGTGGACGGATATGTAGTAGCAACGAATCCCAGTACAGCCAGTATCGCGTTTGCAGTTGG
TAAAGCCAACGTGCCATTGGATCAAATTGCGGTATTGTCCATCGGAACAGGTGAAGCCCCGACTCGGTTAAGAAGAGATA
CGAGGGGATGGGGAATGGTAAGTGCAGATAACATACGTCCCGAAAATCTGAAGAACCTTCCTCCAAATTGGGGAGTCCTT
TTGGACAGGTCGCCTAATGAACCTTTACTGCCATTTCTTCAGATGATTGCTGGCGGTAATGGGTACTATGAATCCATGGT
CAGTGCGAATCTTCTGGGAGATCGTTTTTTCCGGTTAGATCCGCGGATTCCGAACTTCTCCAAAACGGACCCTGCCGTCG
TTCCCGCTGTCATTGAAATTGCGAACAAAACAAACTTACAGCCTGCGAATCAATTTATAGAGAAGAACTGGGGGAGCAAA
TAA

Upstream 100 bases:

>100_bases
AAAAGAGAGATGAAGAAGTGTTTAGTACCAGAGGTATACATCCATACAACAGACTCTAGATCATCATATACTGAATGTAT
GTAGAAAGGAGACATCAGCT

Downstream 100 bases:

>100_bases
TTATTTATTTTAAATCAATTCTCGCTTATACAATTTTGTCCGAGAGAAGATTCTCAAAATAAATACAGGCAATGGGTAGA
ACCGGATTTTTTTAAAGGTT

Product: spore coat protein assembly factor CotR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 319

Protein sequence:

>320_residues
MAKYRIMTFDGGGTLGALSLQLLNRLARQNPKLISRTHVFSGNSIGSFTALALASGRSPRETLQYFEDEILPAFSISRPG
GPVFNQQLPYSGFIKAVRNFFPADLQLIDLRKRIVVPSFKLYSQKLDRWTPVLFHNFPGSPYLNEKVSDVILRSSGAPAT
QRAYQNYVDGYVVATNPSTASIAFAVGKANVPLDQIAVLSIGTGEAPTRLRRDTRGWGMVSADNIRPENLKNLPPNWGVL
LDRSPNEPLLPFLQMIAGGNGYYESMVSANLLGDRFFRLDPRIPNFSKTDPAVVPAVIEIANKTNLQPANQFIEKNWGSK

Sequences:

>Translated_320_residues
MAKYRIMTFDGGGTLGALSLQLLNRLARQNPKLISRTHVFSGNSIGSFTALALASGRSPRETLQYFEDEILPAFSISRPG
GPVFNQQLPYSGFIKAVRNFFPADLQLIDLRKRIVVPSFKLYSQKLDRWTPVLFHNFPGSPYLNEKVSDVILRSSGAPAT
QRAYQNYVDGYVVATNPSTASIAFAVGKANVPLDQIAVLSIGTGEAPTRLRRDTRGWGMVSADNIRPENLKNLPPNWGVL
LDRSPNEPLLPFLQMIAGGNGYYESMVSANLLGDRFFRLDPRIPNFSKTDPAVVPAVIEIANKTNLQPANQFIEKNWGSK
>Mature_319_residues
AKYRIMTFDGGGTLGALSLQLLNRLARQNPKLISRTHVFSGNSIGSFTALALASGRSPRETLQYFEDEILPAFSISRPGG
PVFNQQLPYSGFIKAVRNFFPADLQLIDLRKRIVVPSFKLYSQKLDRWTPVLFHNFPGSPYLNEKVSDVILRSSGAPATQ
RAYQNYVDGYVVATNPSTASIAFAVGKANVPLDQIAVLSIGTGEAPTRLRRDTRGWGMVSADNIRPENLKNLPPNWGVLL
DRSPNEPLLPFLQMIAGGNGYYESMVSANLLGDRFFRLDPRIPNFSKTDPAVVPAVIEIANKTNLQPANQFIEKNWGSK

Specific function: Unknown

COG id: COG3621

COG function: function code R; Patatin

Gene ontology:

Cell location: Spore wall, spore coat (Probable)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): COTR_BACSU (O06996)

Other databases:

- EMBL:   Z94043
- EMBL:   AL009126
- PIR:   F70034
- RefSeq:   NP_391333.1
- ProteinModelPortal:   O06996
- EnsemblBacteria:   EBBACT00000000833
- GeneID:   936427
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU34530
- NMPDR:   fig|224308.1.peg.3459
- GenoList:   BSU34530
- GeneTree:   EBGT00050000002531
- HOGENOM:   HBG338570
- OMA:   SADNIRP
- ProtClustDB:   CLSK887926
- BioCyc:   BSUB:BSU34530-MONOMER
- InterPro:   IPR016035
- InterPro:   IPR002641

Pfam domain/function: PF01734 Patatin; SSF52151 Acyl_Trfase/lysoPlipase

EC number: NA

Molecular weight: Translated: 35357; Mature: 35226

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: NA

Important sites: ACT_SITE 44-44

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKYRIMTFDGGGTLGALSLQLLNRLARQNPKLISRTHVFSGNSIGSFTALALASGRSPR
CCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHCCCCHH
ETLQYFEDEILPAFSISRPGGPVFNQQLPYSGFIKAVRNFFPADLQLIDLRKRIVVPSFK
HHHHHHHHHCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEHHHHHCCCCHH
LYSQKLDRWTPVLFHNFPGSPYLNEKVSDVILRSSGAPATQRAYQNYVDGYVVATNPSTA
HHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCEEEEECCCCC
SIAFAVGKANVPLDQIAVLSIGTGEAPTRLRRDTRGWGMVSADNIRPENLKNLPPNWGVL
EEEEEECCCCCCHHHEEEEEECCCCCCHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCEE
LDRSPNEPLLPFLQMIAGGNGYYESMVSANLLGDRFFRLDPRIPNFSKTDPAVVPAVIEI
EECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEECCCCCCCCCCCCHHHHHHHHH
ANKTNLQPANQFIEKNWGSK
HCCCCCCHHHHHHHHCCCCC
>Mature Secondary Structure 
AKYRIMTFDGGGTLGALSLQLLNRLARQNPKLISRTHVFSGNSIGSFTALALASGRSPR
CCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHCCCCHH
ETLQYFEDEILPAFSISRPGGPVFNQQLPYSGFIKAVRNFFPADLQLIDLRKRIVVPSFK
HHHHHHHHHCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEHHHHHCCCCHH
LYSQKLDRWTPVLFHNFPGSPYLNEKVSDVILRSSGAPATQRAYQNYVDGYVVATNPSTA
HHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCEEEEECCCCC
SIAFAVGKANVPLDQIAVLSIGTGEAPTRLRRDTRGWGMVSADNIRPENLKNLPPNWGVL
EEEEEECCCCCCHHHEEEEEECCCCCCHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCEE
LDRSPNEPLLPFLQMIAGGNGYYESMVSANLLGDRFFRLDPRIPNFSKTDPAVVPAVIEI
EECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEECCCCCCCCCCCCHHHHHHHHH
ANKTNLQPANQFIEKNWGSK
HCCCCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377