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The map label for this gene is gerAC

Identifier: 16080360

GI number: 16080360

Start: 3393293

End: 3394414

Strand: Direct

Name: gerAC

Synonym: BSU33070

Alternate gene names: 16080360

Gene position: 3393293-3394414 (Clockwise)

Preceding gene: 16080359

Following gene: 16080372

Centisome position: 80.49

GC content: 42.69

Gene sequence:

>1122_bases
ATGAAAATCCGGATTTTATGTATGTTTATATGCACCCTATTGCTGTCCGGATGCTGGGACAGTGAGAATATCGAGGAATT
AAGCTTAGTGATCGGAATAGGGCTAGACAAGCCTGACGATGAAAATTTAGAGCTGACACAGCAAATTCTCGTGCCGAAAA
TAATCAGCGCCAAGGAGGGCTCTTCATCTGATCCGACACAGCTTTCTATCACAAAGGGTAAAACTGTCCATCAAATGATG
AGAACCTCTGCATTAAAGCATAAGCCTACGTTTTCACAGCATTTGCGTCTCATTCTGCTTTCCAAAAGCGTGATTGCGGA
TCAAATTGGAATGGACGCCATTATTAACCAGTTTGTCAGAGACAACGGAACAAGGAGGAGTTCCTACGTCTTTATCACCA
ACGGCCGAACTAAGGATATATTTAACATGAATGATGAAGGCGAACCCGCATCCAACGTGATATATGATCTGACAGAGAAT
AATAAGGTGACGATCAGAACGATGGAGCCAGTTACATTGGGGGAGATCTCAGAACACTTAACCTCTGACGATTCATTCCT
CATCCCTCATGTCGGTAAGGAAAACGGCAAGCTCGCGATAAACGGAGCCTCTATCATAAAAAATAAATTATGGCACCGGG
ACCTCACCCCGATTGAGGTTCAAAATATCAGCTTATTTTCAGGCACTGTCGAGGGAGGCGTCATTGACTTGAAGCGCGAT
GGCCATCTCTTTTCTTATGAAGTATATTCAAGCAATCGGAAGATCAAGACGGCATACAAGGACGGAAAGTTCAAATTCAC
CGTTACCCGCAATATTGAAGGTCGTCTATCTGAGGACTGGAATCCCAATGAAGACTCGTTTAAGGATTCATATATTAAAA
GTATTGAAAAGACAGTCGAAAAACGAGTACACGAAACAGTAACGTCATTTATTACAGAGAAGCTGCAGAAAGAGATCAAA
GCGGACGTAACCGGGCTGGGAAACGAGGTCAGAATTCATTATCCTCAAAAGTGGAAAAAGATTTCAAGAAAATGGGATGA
TGATTATTTCAGCAATGCGGAAATAGACTACCGGGTCAATGTGATTGTCAGAGACTTCGGAACGAAAGGCGCAAACAAAT
AG

Upstream 100 bases:

>100_bases
TGATGTATAGCGATTATCTTGGCTATATTTTTGTCTCCCTGTTTCTGCTTCCGTTCATTCTCTTTTTCATTGTAGCTCTC
AAGAGGAGGATTACAACAAA

Downstream 100 bases:

>100_bases
CAGCCGCCTAATTCACGAGATGATTTCGGTGTGCGTACACCGCCGCCTGCGTCCGGTCACTGACATCCAGCTTTGATAAA
ATATTCGTAATATGTGTTTT

Product: germination receptor GerA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MKIRILCMFICTLLLSGCWDSENIEELSLVIGIGLDKPDDENLELTQQILVPKIISAKEGSSSDPTQLSITKGKTVHQMM
RTSALKHKPTFSQHLRLILLSKSVIADQIGMDAIINQFVRDNGTRRSSYVFITNGRTKDIFNMNDEGEPASNVIYDLTEN
NKVTIRTMEPVTLGEISEHLTSDDSFLIPHVGKENGKLAINGASIIKNKLWHRDLTPIEVQNISLFSGTVEGGVIDLKRD
GHLFSYEVYSSNRKIKTAYKDGKFKFTVTRNIEGRLSEDWNPNEDSFKDSYIKSIEKTVEKRVHETVTSFITEKLQKEIK
ADVTGLGNEVRIHYPQKWKKISRKWDDDYFSNAEIDYRVNVIVRDFGTKGANK

Sequences:

>Translated_373_residues
MKIRILCMFICTLLLSGCWDSENIEELSLVIGIGLDKPDDENLELTQQILVPKIISAKEGSSSDPTQLSITKGKTVHQMM
RTSALKHKPTFSQHLRLILLSKSVIADQIGMDAIINQFVRDNGTRRSSYVFITNGRTKDIFNMNDEGEPASNVIYDLTEN
NKVTIRTMEPVTLGEISEHLTSDDSFLIPHVGKENGKLAINGASIIKNKLWHRDLTPIEVQNISLFSGTVEGGVIDLKRD
GHLFSYEVYSSNRKIKTAYKDGKFKFTVTRNIEGRLSEDWNPNEDSFKDSYIKSIEKTVEKRVHETVTSFITEKLQKEIK
ADVTGLGNEVRIHYPQKWKKISRKWDDDYFSNAEIDYRVNVIVRDFGTKGANK
>Mature_373_residues
MKIRILCMFICTLLLSGCWDSENIEELSLVIGIGLDKPDDENLELTQQILVPKIISAKEGSSSDPTQLSITKGKTVHQMM
RTSALKHKPTFSQHLRLILLSKSVIADQIGMDAIINQFVRDNGTRRSSYVFITNGRTKDIFNMNDEGEPASNVIYDLTEN
NKVTIRTMEPVTLGEISEHLTSDDSFLIPHVGKENGKLAINGASIIKNKLWHRDLTPIEVQNISLFSGTVEGGVIDLKRD
GHLFSYEVYSSNRKIKTAYKDGKFKFTVTRNIEGRLSEDWNPNEDSFKDSYIKSIEKTVEKRVHETVTSFITEKLQKEIK
ADVTGLGNEVRIHYPQKWKKISRKWDDDYFSNAEIDYRVNVIVRDFGTKGANK

Specific function: Forms a complex at the inner spore membrane which acts as a receptor for L-alanine, thus is involved in the stimulation of germination in response to alanine. Can stimulate germination in the absence of gerD and gerK gene products (fructose and glucose re

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerABKC lipoprotein family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GERAC_BACSU (P07870)

Other databases:

- EMBL:   M16189
- EMBL:   AJ223978
- EMBL:   AL009126
- PIR:   B26470
- PIR:   G69629
- RefSeq:   NP_391187.1
- ProteinModelPortal:   P07870
- SMR:   P07870
- EnsemblBacteria:   EBBACT00000003087
- GeneID:   935951
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU33070
- NMPDR:   fig|224308.1.peg.3313
- GenoList:   BSU33070
- GeneTree:   EBGT00050000001336
- HOGENOM:   HBG338371
- OMA:   GRLSEDW
- ProtClustDB:   CLSK887856
- BioCyc:   BSUB:BSU33070-MONOMER
- InterPro:   IPR008844
- TIGRFAMs:   TIGR02887

Pfam domain/function: PF05504 Spore_GerAC

EC number: NA

Molecular weight: Translated: 42393; Mature: 42393

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIRILCMFICTLLLSGCWDSENIEELSLVIGIGLDKPDDENLELTQQILVPKIISAKEG
CEEEEHHHHHHHHHHHCCCCCCCHHEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCC
SSSDPTQLSITKGKTVHQMMRTSALKHKPTFSQHLRLILLSKSVIADQIGMDAIINQFVR
CCCCCCEEEEECCHHHHHHHHHHHHCCCCCHHHHHEEHEEHHHHHHHHCCHHHHHHHHHH
DNGTRRSSYVFITNGRTKDIFNMNDEGEPASNVIYDLTENNKVTIRTMEPVTLGEISEHL
CCCCCCCEEEEEECCCCCCEECCCCCCCCCCCEEEEECCCCEEEEEEECCCCHHHHHHHH
TSDDSFLIPHVGKENGKLAINGASIIKNKLWHRDLTPIEVQNISLFSGTVEGGVIDLKRD
CCCCCEEECCCCCCCCEEEEECHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCEEEEECC
GHLFSYEVYSSNRKIKTAYKDGKFKFTVTRNIEGRLSEDWNPNEDSFKDSYIKSIEKTVE
CCEEEEEEECCCCEEEEEECCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
KRVHETVTSFITEKLQKEIKADVTGLGNEVRIHYPQKWKKISRKWDDDYFSNAEIDYRVN
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCCCCCCCCEEEEEEE
VIVRDFGTKGANK
EEEEECCCCCCCC
>Mature Secondary Structure
MKIRILCMFICTLLLSGCWDSENIEELSLVIGIGLDKPDDENLELTQQILVPKIISAKEG
CEEEEHHHHHHHHHHHCCCCCCCHHEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCC
SSSDPTQLSITKGKTVHQMMRTSALKHKPTFSQHLRLILLSKSVIADQIGMDAIINQFVR
CCCCCCEEEEECCHHHHHHHHHHHHCCCCCHHHHHEEHEEHHHHHHHHCCHHHHHHHHHH
DNGTRRSSYVFITNGRTKDIFNMNDEGEPASNVIYDLTENNKVTIRTMEPVTLGEISEHL
CCCCCCCEEEEEECCCCCCEECCCCCCCCCCCEEEEECCCCEEEEEEECCCCHHHHHHHH
TSDDSFLIPHVGKENGKLAINGASIIKNKLWHRDLTPIEVQNISLFSGTVEGGVIDLKRD
CCCCCEEECCCCCCCCEEEEECHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCEEEEECC
GHLFSYEVYSSNRKIKTAYKDGKFKFTVTRNIEGRLSEDWNPNEDSFKDSYIKSIEKTVE
CCEEEEEEECCCCEEEEEECCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
KRVHETVTSFITEKLQKEIKADVTGLGNEVRIHYPQKWKKISRKWDDDYFSNAEIDYRVN
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCCCCCCCCEEEEEEE
VIVRDFGTKGANK
EEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 3110007; 9639930; 9384377