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The map label for this gene is yufQ

Identifier: 16080209

GI number: 16080209

Start: 3243657

End: 3244616

Strand: Direct

Name: yufQ

Synonym: BSU31570

Alternate gene names: 16080209

Gene position: 3243657-3244616 (Clockwise)

Preceding gene: 16080208

Following gene: 16080210

Centisome position: 76.94

GC content: 49.9

Gene sequence:

>960_bases
GTGGACATTGTGCAGATTTTATCTATCATTGTCCCTGCCACACTCGTCTATGCGGCCCCGCTTATTTTAACTGCTCTCGG
CGGCGTGTTTTCCGAGAGATCAGGTGTGGTGAATATCGGCCTAGAAGGCCTCATGATTATCGGGGCGTTCACCAGCGTGT
TATTTAATTTATTTTTTGGTCAGGAATTAGGTGCCGCCGCACCTTGGCTTTCGCTCCTTGCCGCCATGGCAGCAGGCGCC
CTGTTTTCACTGATTCACGCGGCAGCGGCGATTTCGTTTCGCGCCGACCAGACAGTCAGCGGTGTCGCCATTAACATGCT
GGCGCTTGGGGCAACTTTATTTATCGTCAAACTGATCTACGGCAAAGCGCAGACAGACAAAATTCCAGAGCCTTTTTATA
AGACGAAAATCCCCGGTTTGGGCGATATTCCCGTCTTGGGAAAGATCTTCTTTTCGGATGTCTATTATACGTCTATTCTT
GCAATAGCACTTGCCTTTATTTCCTGGTTTATCTTGTTCAAAACGCCGTTCGGCCTTCGTATCCGTTCTGTCGGCGAGCA
TCCGATGGCGGCCGATACGATGGGAATCAACGTATATAAAATGCGCTACATCGGCGTGATGATCAGCGGATTGTTCGGCG
GTCTCGGCGGCGGCGTATATGCCTCCACAATTGCGCTTGATTTCACGCACTCTACCATCTCCGGGCAAGGTTTTATCGCC
CTGGCAGCGCTTGTATTCGGAAAATGGCATCCGATCGGAGCACTGGGGGCCGCCCTGTTTTTCGGATTCGCCCAAAGCTT
AAGCATCATTGGATCGCTGCTCCCTCTTTTTAAAGACATACCAAATGTGTATATGCTGATGGCTCCTTATATCTTAACGA
TTCTCGCTTTAACCGGCTTTATCGGGCGGGCAGATGCGCCAAAAGCCAATGGCGTGCCTTATATTAAAGGAAAAAGATAA

Upstream 100 bases:

>100_bases
GGTCGTTGATATTGTGATTGCCATTATTATTCTATTTGTGGCTTCAAGCTATGCGATTCGTTTCGTCATGGGCAAATTGA
AGAAAAAGGGGGCGAACTAA

Downstream 100 bases:

>100_bases
ACATTCTCCCCTGGGAAGACGATTCTCAGGGATTTTTTTCTAATCCAAAAGACCCCCTTAATTTAATTGTTTATTAGTTT
TTTAACTTAAAAAAATATGA

Product: permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MDIVQILSIIVPATLVYAAPLILTALGGVFSERSGVVNIGLEGLMIIGAFTSVLFNLFFGQELGAAAPWLSLLAAMAAGA
LFSLIHAAAAISFRADQTVSGVAINMLALGATLFIVKLIYGKAQTDKIPEPFYKTKIPGLGDIPVLGKIFFSDVYYTSIL
AIALAFISWFILFKTPFGLRIRSVGEHPMAADTMGINVYKMRYIGVMISGLFGGLGGGVYASTIALDFTHSTISGQGFIA
LAALVFGKWHPIGALGAALFFGFAQSLSIIGSLLPLFKDIPNVYMLMAPYILTILALTGFIGRADAPKANGVPYIKGKR

Sequences:

>Translated_319_residues
MDIVQILSIIVPATLVYAAPLILTALGGVFSERSGVVNIGLEGLMIIGAFTSVLFNLFFGQELGAAAPWLSLLAAMAAGA
LFSLIHAAAAISFRADQTVSGVAINMLALGATLFIVKLIYGKAQTDKIPEPFYKTKIPGLGDIPVLGKIFFSDVYYTSIL
AIALAFISWFILFKTPFGLRIRSVGEHPMAADTMGINVYKMRYIGVMISGLFGGLGGGVYASTIALDFTHSTISGQGFIA
LAALVFGKWHPIGALGAALFFGFAQSLSIIGSLLPLFKDIPNVYMLMAPYILTILALTGFIGRADAPKANGVPYIKGKR
>Mature_319_residues
MDIVQILSIIVPATLVYAAPLILTALGGVFSERSGVVNIGLEGLMIIGAFTSVLFNLFFGQELGAAAPWLSLLAAMAAGA
LFSLIHAAAAISFRADQTVSGVAINMLALGATLFIVKLIYGKAQTDKIPEPFYKTKIPGLGDIPVLGKIFFSDVYYTSIL
AIALAFISWFILFKTPFGLRIRSVGEHPMAADTMGINVYKMRYIGVMISGLFGGLGGGVYASTIALDFTHSTISGQGFIA
LAALVFGKWHPIGALGAALFFGFAQSLSIIGSLLPLFKDIPNVYMLMAPYILTILALTGFIGRADAPKANGVPYIKGKR

Specific function: Part of the binding-protein-dependent transport system. Probably responsible for the translocation of the substrates across the membrane

COG id: COG1079

COG function: function code R; Uncharacterized ABC-type transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YUFQ_BACSU (O05255)

Other databases:

- EMBL:   Z93937
- EMBL:   AL009126
- PIR:   F70009
- RefSeq:   NP_391035.1
- ProteinModelPortal:   O05255
- EnsemblBacteria:   EBBACT00000000642
- GeneID:   937176
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU31570
- NMPDR:   fig|224308.1.peg.3160
- GenoList:   BSU31570
- GeneTree:   EBGT00050000001195
- HOGENOM:   HBG649623
- OMA:   LEFAHIF
- ProtClustDB:   CLSK887800
- BioCyc:   BSUB:BSU31570-MONOMER
- InterPro:   IPR001851

Pfam domain/function: PF02653 BPD_transp_2

EC number: NA

Molecular weight: Translated: 33739; Mature: 33739

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x11c3b334)-; HASH(0x11e31cdc)-; HASH(0x1208b194)-; HASH(0x11867738)-; HASH(0x12073f28)-; HASH(0x11bc3e34)-; HASH(0x113a6a28)-; HASH(0x120e34f4)-; HASH(0x11ed36c0)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIVQILSIIVPATLVYAAPLILTALGGVFSERSGVVNIGLEGLMIIGAFTSVLFNLFFG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHH
QELGAAAPWLSLLAAMAAGALFSLIHAAAAISFRADQTVSGVAINMLALGATLFIVKLIY
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
GKAQTDKIPEPFYKTKIPGLGDIPVLGKIFFSDVYYTSILAIALAFISWFILFKTPFGLR
CCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
IRSVGEHPMAADTMGINVYKMRYIGVMISGLFGGLGGGVYASTIALDFTHSTISGQGFIA
ECCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHEEEEECCCCCCCHHHH
LAALVFGKWHPIGALGAALFFGFAQSLSIIGSLLPLFKDIPNVYMLMAPYILTILALTGF
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
IGRADAPKANGVPYIKGKR
HCCCCCCCCCCCCCCCCCH
>Mature Secondary Structure
MDIVQILSIIVPATLVYAAPLILTALGGVFSERSGVVNIGLEGLMIIGAFTSVLFNLFFG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHH
QELGAAAPWLSLLAAMAAGALFSLIHAAAAISFRADQTVSGVAINMLALGATLFIVKLIY
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
GKAQTDKIPEPFYKTKIPGLGDIPVLGKIFFSDVYYTSILAIALAFISWFILFKTPFGLR
CCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
IRSVGEHPMAADTMGINVYKMRYIGVMISGLFGGLGGGVYASTIALDFTHSTISGQGFIA
ECCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHEEEEECCCCCCCHHHH
LAALVFGKWHPIGALGAALFFGFAQSLSIIGSLLPLFKDIPNVYMLMAPYILTILALTGF
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
IGRADAPKANGVPYIKGKR
HCCCCCCCCCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377