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The map label for this gene is amyC

Identifier: 16080081

GI number: 16080081

Start: 3100031

End: 3100861

Strand: Direct

Name: amyC

Synonym: BSU30290

Alternate gene names: 16080081

Gene position: 3100031-3100861 (Clockwise)

Preceding gene: 16080080

Following gene: 16080082

Centisome position: 73.54

GC content: 44.52

Gene sequence:

>831_bases
ATGAGAGCCGCCCGTACAAAAAGCATGCGGATCATTACGCTTCTTGCAGCCATTGTGGCCTGTGCGCATTTTATTCCTTT
TTATATCCTGCTGACCACTTCATTGAAAGCAAAAGGAGACTACAGTTCGAAATGGATATTTCCAGCCGACATCTCCTTTC
ATAATTTTTCAGAGGCGTGGGAGCGCGCTTCGCTAGGAAACTCTTTTATAAACACCATGATCATCACAGGTTTTTCTGCC
TTGTTATTAATTATATTCGGCTCACTTGCCGCCTACCCGCTTGCCCGGCGGGAAACGAAACTGAATAAAGCCGTTTTTGC
CTTGCTGATTTCCATTATGATCATCCCTCCGTTAACGTCCATGGTTCCTTTGTACCGAATGGTCGTGGACGCCGGAATGG
TCAATACACACGCAATCGCCATTTTCATCAATACAGCGGCTTACATGCCGTTAACCGTATTCTTATATTCAGGCTTTATC
CGATCGACCATTCCAAAAGAGCTTGTAGAAGCCGCAAGAATTGACGGTGCAGGCATGCTGAAAATCTTTTTTACGATTGT
GTTTCCTCTGCTGAAGCCGATCACTGCGACCATCTGTATCATTTCTTGTGTCTTTATTTGGAACGACTATCAATTTGCCA
TTTTCTTTTTACAAGATCAAAAGGTTCAGACATTAACAGTAGCCATGGCAGGTTTTTTCGGAGAAAACGCAAACAACCTT
CATTTAGTTGCCGCAGCGGCACTTATGGCAATGCTGCCGATGGTTGTTCTGTTTTTGGCGCTGCAAAAATACTTTATTGC
CGGCCTGTCTTCCGGAGCGGTAAAGGGTTAA

Upstream 100 bases:

>100_bases
CCGGCTATGCCGCAACGCAAGGCATATTTATGGCATTTGTCATTTTGATCATCAGCTTTTGCGCGCTTGCGTACTTTAAA
AGAAAGGAGACGGAAATGTC

Downstream 100 bases:

>100_bases
CATTAAAGGGGGAAGCAATATGAAAAAGATTACATTTATCGGTGCAGGGAGCACGATTTTCGCCAAAAATGTTTTGGGAG
ACTGCCTGTTAACAGAGGCA

Product: maltose and multiple sugars ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MRAARTKSMRIITLLAAIVACAHFIPFYILLTTSLKAKGDYSSKWIFPADISFHNFSEAWERASLGNSFINTMIITGFSA
LLLIIFGSLAAYPLARRETKLNKAVFALLISIMIIPPLTSMVPLYRMVVDAGMVNTHAIAIFINTAAYMPLTVFLYSGFI
RSTIPKELVEAARIDGAGMLKIFFTIVFPLLKPITATICIISCVFIWNDYQFAIFFLQDQKVQTLTVAMAGFFGENANNL
HLVAAAALMAMLPMVVLFLALQKYFIAGLSSGAVKG

Sequences:

>Translated_276_residues
MRAARTKSMRIITLLAAIVACAHFIPFYILLTTSLKAKGDYSSKWIFPADISFHNFSEAWERASLGNSFINTMIITGFSA
LLLIIFGSLAAYPLARRETKLNKAVFALLISIMIIPPLTSMVPLYRMVVDAGMVNTHAIAIFINTAAYMPLTVFLYSGFI
RSTIPKELVEAARIDGAGMLKIFFTIVFPLLKPITATICIISCVFIWNDYQFAIFFLQDQKVQTLTVAMAGFFGENANNL
HLVAAAALMAMLPMVVLFLALQKYFIAGLSSGAVKG
>Mature_276_residues
MRAARTKSMRIITLLAAIVACAHFIPFYILLTTSLKAKGDYSSKWIFPADISFHNFSEAWERASLGNSFINTMIITGFSA
LLLIIFGSLAAYPLARRETKLNKAVFALLISIMIIPPLTSMVPLYRMVVDAGMVNTHAIAIFINTAAYMPLTVFLYSGFI
RSTIPKELVEAARIDGAGMLKIFFTIVFPLLKPITATICIISCVFIWNDYQFAIFFLQDQKVQTLTVAMAGFFGENANNL
HLVAAAALMAMLPMVVLFLALQKYFIAGLSSGAVKG

Specific function: Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain

Homologues:

Organism=Escherichia coli, GI1787571, Length=255, Percent_Identity=26.2745098039216, Blast_Score=88, Evalue=6e-19,
Organism=Escherichia coli, GI1790464, Length=275, Percent_Identity=26.1818181818182, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1789860, Length=210, Percent_Identity=29.0476190476191, Blast_Score=79, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): AMYC_BACSU (O34518)

Other databases:

- EMBL:   AF008220
- EMBL:   AL009126
- PIR:   D69585
- RefSeq:   NP_390907.1
- ProteinModelPortal:   O34518
- SMR:   O34518
- EnsemblBacteria:   EBBACT00000001094
- GeneID:   935927
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU30290
- NMPDR:   fig|224308.1.peg.3032
- GenoList:   BSU30290
- GeneTree:   EBGT00050000000646
- HOGENOM:   HBG729451
- OMA:   FIRSTIP
- ProtClustDB:   CLSK873254
- BioCyc:   BSUB:BSU30290-MONOMER
- InterPro:   IPR000515

Pfam domain/function: PF00528 BPD_transp_1

EC number: NA

Molecular weight: Translated: 30376; Mature: 30376

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: PS50928 ABC_TM1; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x113b477c)-; HASH(0x11daa548)-; HASH(0x117468ec)-; HASH(0x10d94810)-; HASH(0x10e8200c)-; HASH(0x11da1e50)-;

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAARTKSMRIITLLAAIVACAHFIPFYILLTTSLKAKGDYSSKWIFPADISFHNFSEAW
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHH
ERASLGNSFINTMIITGFSALLLIIFGSLAAYPLARRETKLNKAVFALLISIMIIPPLTS
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHH
MVPLYRMVVDAGMVNTHAIAIFINTAAYMPLTVFLYSGFIRSTIPKELVEAARIDGAGML
HHHHHHHHHHCCCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
KIFFTIVFPLLKPITATICIISCVFIWNDYQFAIFFLQDQKVQTLTVAMAGFFGENANNL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHCCCCCCH
HLVAAAALMAMLPMVVLFLALQKYFIAGLSSGAVKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
>Mature Secondary Structure
MRAARTKSMRIITLLAAIVACAHFIPFYILLTTSLKAKGDYSSKWIFPADISFHNFSEAW
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHH
ERASLGNSFINTMIITGFSALLLIIFGSLAAYPLARRETKLNKAVFALLISIMIIPPLTS
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHH
MVPLYRMVVDAGMVNTHAIAIFINTAAYMPLTVFLYSGFIRSTIPKELVEAARIDGAGML
HHHHHHHHHHCCCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
KIFFTIVFPLLKPITATICIISCVFIWNDYQFAIFFLQDQKVQTLTVAMAGFFGENANNL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHCCCCCCH
HLVAAAALMAMLPMVVLFLALQKYFIAGLSSGAVKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377