Definition | Aquifex aeolicus VF5, complete genome. |
---|---|
Accession | NC_000918 |
Length | 1,551,335 |
Click here to switch to the map view.
The map label for this gene is uraP
Identifier: 15607101
GI number: 15607101
Start: 1524118
End: 1524744
Strand: Direct
Name: uraP
Synonym: aq_2163
Alternate gene names: 15607101
Gene position: 1524118-1524744 (Clockwise)
Preceding gene: 15607100
Following gene: 15607106
Centisome position: 98.25
GC content: 42.9
Gene sequence:
>627_bases ATGATCGTGGAATTATCTCACCCCCTGATAAAGCACAAGGTAAACACAGCAAGAATACAGGACACTTCCGCAGAAAAGCT CAGGAAAACCTTAAAGGAACTTGGTTTTATGCTTGTATATGAAGCCCTAAAAGACATACTTTTAGAGGAAAAGGAAGTCA GAACGTGGATAGGTAACAAAAGATTTAATTACTTGAATGAAGAAGAAATAGTATTCGTTCCCATACTGAGGGCGGGACTT TCCTTTCTGGAGGGAGCACTCCAAGTCGTACCGAACGCAAAGGTAGGATTTCTAGGAATAAAGAGAAACGAAGAGACTCT TGAATCTCACATATACTACTCAAGACTGCCAGAGCTGAAGGGAAAAATCGTAGTTATACTTGACCCCATGCTTGCAACCG GAGGAACGCTGGAAGTGGCGTTAAGGGAAATCCTCAAACACTCACCTCTTAAGGTAAAGAGCGTGCACGCGATAGCCGCC CCGGAGGGTCTAAAAAGGATAGAAGAAAAGTTTAAAGAAGTGGAAATCTTTGTGGGAAATGTAGATGAAAGATTAAACGA CAAGGGATACATAATCCCGGGTCTGGGAGACATAGGCGACAGGTTATACGCGGTAAGTGTGTATTGA
Upstream 100 bases:
>100_bases GACGGCAAAGTGGTGGAAGAAGGAGACGTTTTTGAGATTTTTGACAATCCTAAGCACGAATACACAAAAAAACTTCTCTC TGCGATTTAAAATAGAAGGA
Downstream 100 bases:
>100_bases TTTCTTTTCTTTGATCATTTTCGCTATTTCCTCATAGTTGTCGTTCAGTCTTCTGTCTATTTTTTCCACAACTAGCTCCA CGTTTTCTGGTATGGATATC
Product: uracil phosphoribosyltransferase
Products: NA
Alternate protein names: UMP pyrophosphorylase; UPRTase
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MIVELSHPLIKHKVNTARIQDTSAEKLRKTLKELGFMLVYEALKDILLEEKEVRTWIGNKRFNYLNEEEIVFVPILRAGL SFLEGALQVVPNAKVGFLGIKRNEETLESHIYYSRLPELKGKIVVILDPMLATGGTLEVALREILKHSPLKVKSVHAIAA PEGLKRIEEKFKEVEIFVGNVDERLNDKGYIIPGLGDIGDRLYAVSVY
Sequences:
>Translated_208_residues MIVELSHPLIKHKVNTARIQDTSAEKLRKTLKELGFMLVYEALKDILLEEKEVRTWIGNKRFNYLNEEEIVFVPILRAGL SFLEGALQVVPNAKVGFLGIKRNEETLESHIYYSRLPELKGKIVVILDPMLATGGTLEVALREILKHSPLKVKSVHAIAA PEGLKRIEEKFKEVEIFVGNVDERLNDKGYIIPGLGDIGDRLYAVSVY >Mature_208_residues MIVELSHPLIKHKVNTARIQDTSAEKLRKTLKELGFMLVYEALKDILLEEKEVRTWIGNKRFNYLNEEEIVFVPILRAGL SFLEGALQVVPNAKVGFLGIKRNEETLESHIYYSRLPELKGKIVVILDPMLATGGTLEVALREILKHSPLKVKSVHAIAA PEGLKRIEEKFKEVEIFVGNVDERLNDKGYIIPGLGDIGDRLYAVSVY
Specific function: Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
COG id: COG0035
COG function: function code F; Uracil phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPRTase family
Homologues:
Organism=Homo sapiens, GI301129207, Length=209, Percent_Identity=27.7511961722488, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI57863312, Length=209, Percent_Identity=27.7511961722488, Blast_Score=74, Evalue=8e-14, Organism=Escherichia coli, GI87082118, Length=205, Percent_Identity=39.5121951219512, Blast_Score=166, Evalue=8e-43, Organism=Caenorhabditis elegans, GI17539892, Length=204, Percent_Identity=25, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17539894, Length=204, Percent_Identity=25, Blast_Score=77, Evalue=5e-15, Organism=Saccharomyces cerevisiae, GI6321920, Length=140, Percent_Identity=37.1428571428571, Blast_Score=96, Evalue=3e-21, Organism=Drosophila melanogaster, GI28573516, Length=204, Percent_Identity=29.9019607843137, Blast_Score=78, Evalue=3e-15, Organism=Drosophila melanogaster, GI28573514, Length=204, Percent_Identity=29.9019607843137, Blast_Score=78, Evalue=3e-15, Organism=Drosophila melanogaster, GI28573512, Length=204, Percent_Identity=29.9019607843137, Blast_Score=78, Evalue=3e-15, Organism=Drosophila melanogaster, GI45550449, Length=205, Percent_Identity=29.7560975609756, Blast_Score=78, Evalue=4e-15,
Paralogues:
None
Copy number: 2580 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): UPP_AQUAE (O67914)
Other databases:
- EMBL: AE000657 - PIR: F70485 - RefSeq: NP_214483.1 - PDB: 2E55 - PDBsum: 2E55 - ProteinModelPortal: O67914 - SMR: O67914 - GeneID: 1193903 - GenomeReviews: AE000657_GR - KEGG: aae:aq_2163 - NMPDR: fig|224324.1.peg.1498 - HOGENOM: HBG326432 - OMA: VYVLDPM - PhylomeDB: O67914 - BioCyc: AAEO224324:AQ_2163-MONOMER - BRENDA: 2.4.2.9 - HAMAP: MF_01218_B - InterPro: IPR000836 - InterPro: IPR005765 - TIGRFAMs: TIGR01091
Pfam domain/function: PF00156 Pribosyltran
EC number: =2.4.2.9
Molecular weight: Translated: 23533; Mature: 23533
Theoretical pI: Translated: 7.85; Mature: 7.85
Prosite motif: NA
Important sites: BINDING 77-77 BINDING 102-102 BINDING 191-191 BINDING 197-197
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVELSHPLIKHKVNTARIQDTSAEKLRKTLKELGFMLVYEALKDILLEEKEVRTWIGNK CEEECCCHHHHHCCCHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCC RFNYLNEEEIVFVPILRAGLSFLEGALQVVPNAKVGFLGIKRNEETLESHIYYSRLPELK CCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHCCCCC GKIVVILDPMLATGGTLEVALREILKHSPLKVKSVHAIAAPEGLKRIEEKFKEVEIFVGN CCEEEEECCCHHCCCHHHHHHHHHHHCCCCCEEEEEEHHCCHHHHHHHHHHHHHEEEECC VDERLNDKGYIIPGLGDIGDRLYAVSVY HHHHCCCCCEEECCCCCCCCCEEEEEEC >Mature Secondary Structure MIVELSHPLIKHKVNTARIQDTSAEKLRKTLKELGFMLVYEALKDILLEEKEVRTWIGNK CEEECCCHHHHHCCCHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCC RFNYLNEEEIVFVPILRAGLSFLEGALQVVPNAKVGFLGIKRNEETLESHIYYSRLPELK CCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHCCCCC GKIVVILDPMLATGGTLEVALREILKHSPLKVKSVHAIAAPEGLKRIEEKFKEVEIFVGN CCEEEEECCCHHCCCHHHHHHHHHHHCCCCCEEEEEEHHCCHHHHHHHHHHHHHEEEECC VDERLNDKGYIIPGLGDIGDRLYAVSVY HHHHCCCCCEEECCCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9537320