Definition | Aquifex aeolicus VF5, complete genome. |
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Accession | NC_000918 |
Length | 1,551,335 |
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The map label for this gene is ppsA
Identifier: 15607086
GI number: 15607086
Start: 1508458
End: 1511028
Strand: Direct
Name: ppsA
Synonym: aq_2142
Alternate gene names: 15607086
Gene position: 1508458-1511028 (Clockwise)
Preceding gene: 15607085
Following gene: 15607087
Centisome position: 97.24
GC content: 46.13
Gene sequence:
>2571_bases ATGTCCGTTGATAAAAGCAAAGCTCTTGTTCTTTGGCTCGATGAAGTTACCATTGAAGATATCCCTATAGCTGGCGGTAA GAACGCATCGTTAGGTGAGATGATAAGAAATCTCTCACCTCTTGGCGTGAAAATTCCCTATGGATACGTCGTTACCGCAA ACGCTTACTACTACTTCCTCGATTACAACAACCTGAGGGACAAAATAAGGAAGATTCTGGAGGGGTTGAACACGGACGAC CTGAAGGACCTTCAGAGGAGGGGACACGAGGTAAGGGAACTTATAAGAGGGGGAACGTTTCCACCGGATTTAGAAGAAGC TATAAAGGATTATTATAATAAGCTATCGGAAAAGTACAAAACCCACGCCGTTGACGTTGCTGTTCGTTCTTCTGCAACCG CTGAGGACCTTCCGGACGCTTCCTTTGCAGGACAGCAGGAAACTTACCTGAACGTTGTTGGTGCGGAAAATGTCCTCGTA GCTATAAAGAACTGCTTTGCATCCCTCTTTACGGACAGGGCCATCGTTTACAGGGAAAGATTCGGGTTTGACCACTTTAA GGTAGGTATAGCGGTAGGCGTTCAGAAGATGGTTCGCTCCGATATGGGAGCTTCAGGTGTTATGTTTACCCTTGATACGG AAACAGGTTTTAAAGACGTAGTAGTAATAAACGCAGCCTACGGACTCGGTGAACTCCTCGTGAGGGGAGAAGTCACCCCG GACGAGTACATAGTGTTCAAACCCACCCTAATGAAGGGATACTCAGCGATAATAGAAAAGAAACTAGGGAGAAAAGACAG GAAGATGATTTACGGAACGGGGGACGAGAGGGTAAAGATAGTAAACGTTCCCAAGGAAGACCAGAAAAAGTTTGCACTAA ACGACGACGAAATTCTACAGCTCGCAAAGTGGGGCGTCCTTATAGAAGAGCACTACTCCAAAAAGAACGGTAGATGGACA CCTATGGATATTGAGTGGGCAAAAGACGGGATACTCAACGAGCTTTTTGTGGTTCAGGCGAGACCCGAAACTGTTCACTC CAGAAAGAAGGAAAACGTAGTGAAGATTTACAAGATAAAAACCCCTGAAGAGGAAAGGAAGAACAGGGTAATAGTAAAGG GGATAGCCGTAGGAGACAAGATAGCAACCGGAAAGGCGAGGGTTCTTTTTGACTTAAAAGAGGCGGACCAGTTCCAGGAA GGTGAGATACTCGTCACGGACATCACGGACCCGGACTGGGAACCCGTAATGAAGAAAGCTGCGGCTATAGTAACTAACAG AGGAGGAAGGACTTCTCACGCGGCGATAGTCGCAAGGGAACTGGGAATTCCTGCAGTTGTGGGAACGGGAAACGCAACCG AAAAGATAAAAACGGGAGAAGAAATAACCGTATCCTGCGCAGAAGGTGAAACGGGATACGTCTACGAAGGTAAGATAGAC TATGAAGTAGAAGAGATAAACCTTGAAAACATTCCAAAGCCAAAAACAAAGATAATGATGAACATAGGAAATCCCGAGTC CGCCTTCAGGTACGCATCACTGCCAAACGACGGGGTGGGATTGGCAAGGGAAGAATTCATAATAGCAAACTACATAAAGA TACACCCCCTTGCACTGCTCCACTACGAGGACCTCAAAGAACTCTACGAGAAACTGGAGAGGGAAAACCTAATAGACGAA AAAGGCTTTGTCCAGTTTAAACTCATTTACCACTACGCAAACGGAAGGCTTGCAAATAAACTCGCAAAGGGCAAAGACAA ACTCAGGGTTAACTTGAGGAAGATACTTCAGGACATAGAAAACCTGACCTTCGGTTACGAGGACAAGGCGACCTACTACA TAAAGAAACTCTCTTACGGTATAGCGAAAATAGCGGCTGCTTTTTACCCAAATCCTGTAATAGTGAGATTTTCCGACTTC AAGTCTAACGAGTACGCAAACCTTATCGGCGGAATTCTCTTTGAACCTGAAGAAGAGAACCCAATGCTCGGTTGGAGGGG AGCGTCAAGGTATTACTCTGACGTCTTTAAGGAAGCCTTCGGAATGGAGTGCAAGGCGATTATCAGAGTTAGGAACAAGA TGGGACTCACCAACACAAAAGTTATGATACCCTTCTGCAGGACACCCGAGGAAGGAGAAAAGGTCCTTCAGGTAATGGAA GAGTATGGACTCAGAAAAGGGGAAAATGGACTGGAAGTTTACGTTATGGCAGAACTTCCCAGCAACATTGTCCTTGCTGA CAGATACGCTCAGATATTTGACGGTTTCTCTATAGGTTCTAACGACCTCACTCAGCTCACTTTGGGACTGGACAGGGATT CTGAACTCGTGGCACACCTCTACGACGAAAGGAACGAGGCTGTAAAAAGGCTCATCGCTCAACTCATAAAAACAGCAAAG GAGTACGGCAGGAAAGTGGGAATATGCGGTCAGGCTCCTTCGGACTTTCCGGAATTCGCTCAGTTTCTCGTTGAACAGGG AATAGACAGTATATCCCTCAACCCAGACTCCGTACTCAAGACCATGCTCGCGGTAGTAGAAATGGAGAAAAAACTCGGAG TCCTTAAATGA
Upstream 100 bases:
>100_bases GAAAAAATAAGAAACAACAGGATATCCCTCTTAAAGAGAGTAGAAAACCTCTTTAGAACGTTCGGAGACTTTAACGAAAT TGTTATAAAGGAGGGCTGAT
Downstream 100 bases:
>100_bases AACTCCTAGAGAAGATAAAGGAAAGGACAAAAGGTTTCCGTTTACCTTCCCTTTCTCTCTCCCCTAAAACTTCACTTTCC GTTTTCCTAACTCCTGAATT
Product: phosphoenolpyruvate synthase
Products: NA
Alternate protein names: PEP synthase; Pyruvate, water dikinase
Number of amino acids: Translated: 856; Mature: 855
Protein sequence:
>856_residues MSVDKSKALVLWLDEVTIEDIPIAGGKNASLGEMIRNLSPLGVKIPYGYVVTANAYYYFLDYNNLRDKIRKILEGLNTDD LKDLQRRGHEVRELIRGGTFPPDLEEAIKDYYNKLSEKYKTHAVDVAVRSSATAEDLPDASFAGQQETYLNVVGAENVLV AIKNCFASLFTDRAIVYRERFGFDHFKVGIAVGVQKMVRSDMGASGVMFTLDTETGFKDVVVINAAYGLGELLVRGEVTP DEYIVFKPTLMKGYSAIIEKKLGRKDRKMIYGTGDERVKIVNVPKEDQKKFALNDDEILQLAKWGVLIEEHYSKKNGRWT PMDIEWAKDGILNELFVVQARPETVHSRKKENVVKIYKIKTPEEERKNRVIVKGIAVGDKIATGKARVLFDLKEADQFQE GEILVTDITDPDWEPVMKKAAAIVTNRGGRTSHAAIVARELGIPAVVGTGNATEKIKTGEEITVSCAEGETGYVYEGKID YEVEEINLENIPKPKTKIMMNIGNPESAFRYASLPNDGVGLAREEFIIANYIKIHPLALLHYEDLKELYEKLERENLIDE KGFVQFKLIYHYANGRLANKLAKGKDKLRVNLRKILQDIENLTFGYEDKATYYIKKLSYGIAKIAAAFYPNPVIVRFSDF KSNEYANLIGGILFEPEEENPMLGWRGASRYYSDVFKEAFGMECKAIIRVRNKMGLTNTKVMIPFCRTPEEGEKVLQVME EYGLRKGENGLEVYVMAELPSNIVLADRYAQIFDGFSIGSNDLTQLTLGLDRDSELVAHLYDERNEAVKRLIAQLIKTAK EYGRKVGICGQAPSDFPEFAQFLVEQGIDSISLNPDSVLKTMLAVVEMEKKLGVLK
Sequences:
>Translated_856_residues MSVDKSKALVLWLDEVTIEDIPIAGGKNASLGEMIRNLSPLGVKIPYGYVVTANAYYYFLDYNNLRDKIRKILEGLNTDD LKDLQRRGHEVRELIRGGTFPPDLEEAIKDYYNKLSEKYKTHAVDVAVRSSATAEDLPDASFAGQQETYLNVVGAENVLV AIKNCFASLFTDRAIVYRERFGFDHFKVGIAVGVQKMVRSDMGASGVMFTLDTETGFKDVVVINAAYGLGELLVRGEVTP DEYIVFKPTLMKGYSAIIEKKLGRKDRKMIYGTGDERVKIVNVPKEDQKKFALNDDEILQLAKWGVLIEEHYSKKNGRWT PMDIEWAKDGILNELFVVQARPETVHSRKKENVVKIYKIKTPEEERKNRVIVKGIAVGDKIATGKARVLFDLKEADQFQE GEILVTDITDPDWEPVMKKAAAIVTNRGGRTSHAAIVARELGIPAVVGTGNATEKIKTGEEITVSCAEGETGYVYEGKID YEVEEINLENIPKPKTKIMMNIGNPESAFRYASLPNDGVGLAREEFIIANYIKIHPLALLHYEDLKELYEKLERENLIDE KGFVQFKLIYHYANGRLANKLAKGKDKLRVNLRKILQDIENLTFGYEDKATYYIKKLSYGIAKIAAAFYPNPVIVRFSDF KSNEYANLIGGILFEPEEENPMLGWRGASRYYSDVFKEAFGMECKAIIRVRNKMGLTNTKVMIPFCRTPEEGEKVLQVME EYGLRKGENGLEVYVMAELPSNIVLADRYAQIFDGFSIGSNDLTQLTLGLDRDSELVAHLYDERNEAVKRLIAQLIKTAK EYGRKVGICGQAPSDFPEFAQFLVEQGIDSISLNPDSVLKTMLAVVEMEKKLGVLK >Mature_855_residues SVDKSKALVLWLDEVTIEDIPIAGGKNASLGEMIRNLSPLGVKIPYGYVVTANAYYYFLDYNNLRDKIRKILEGLNTDDL KDLQRRGHEVRELIRGGTFPPDLEEAIKDYYNKLSEKYKTHAVDVAVRSSATAEDLPDASFAGQQETYLNVVGAENVLVA IKNCFASLFTDRAIVYRERFGFDHFKVGIAVGVQKMVRSDMGASGVMFTLDTETGFKDVVVINAAYGLGELLVRGEVTPD EYIVFKPTLMKGYSAIIEKKLGRKDRKMIYGTGDERVKIVNVPKEDQKKFALNDDEILQLAKWGVLIEEHYSKKNGRWTP MDIEWAKDGILNELFVVQARPETVHSRKKENVVKIYKIKTPEEERKNRVIVKGIAVGDKIATGKARVLFDLKEADQFQEG EILVTDITDPDWEPVMKKAAAIVTNRGGRTSHAAIVARELGIPAVVGTGNATEKIKTGEEITVSCAEGETGYVYEGKIDY EVEEINLENIPKPKTKIMMNIGNPESAFRYASLPNDGVGLAREEFIIANYIKIHPLALLHYEDLKELYEKLERENLIDEK GFVQFKLIYHYANGRLANKLAKGKDKLRVNLRKILQDIENLTFGYEDKATYYIKKLSYGIAKIAAAFYPNPVIVRFSDFK SNEYANLIGGILFEPEEENPMLGWRGASRYYSDVFKEAFGMECKAIIRVRNKMGLTNTKVMIPFCRTPEEGEKVLQVMEE YGLRKGENGLEVYVMAELPSNIVLADRYAQIFDGFSIGSNDLTQLTLGLDRDSELVAHLYDERNEAVKRLIAQLIKTAKE YGRKVGICGQAPSDFPEFAQFLVEQGIDSISLNPDSVLKTMLAVVEMEKKLGVLK
Specific function: Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
COG id: COG0574
COG function: function code G; Phosphoenolpyruvate synthase/pyruvate phosphate dikinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEP-utilizing enzyme family
Homologues:
Organism=Escherichia coli, GI1787994, Length=853, Percent_Identity=49.5896834701055, Blast_Score=861, Evalue=0.0, Organism=Escherichia coli, GI1788756, Length=224, Percent_Identity=31.6964285714286, Blast_Score=99, Evalue=2e-21, Organism=Escherichia coli, GI1788726, Length=190, Percent_Identity=33.6842105263158, Blast_Score=96, Evalue=9e-21, Organism=Escherichia coli, GI1789193, Length=221, Percent_Identity=29.4117647058824, Blast_Score=87, Evalue=4e-18, Organism=Escherichia coli, GI48994992, Length=191, Percent_Identity=31.413612565445, Blast_Score=81, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17564524, Length=237, Percent_Identity=32.0675105485232, Blast_Score=85, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PPSA_AQUAE (O67899)
Other databases:
- EMBL: AE000657 - PIR: G70483 - RefSeq: NP_214468.1 - ProteinModelPortal: O67899 - SMR: O67899 - GeneID: 1193888 - GenomeReviews: AE000657_GR - KEGG: aae:aq_2142 - NMPDR: fig|224324.1.peg.1483 - HOGENOM: HBG284863 - OMA: ALIHFDE - PhylomeDB: O67899 - ProtClustDB: PRK06464 - BioCyc: AAEO224324:AQ_2142-MONOMER - BRENDA: 2.7.9.2 - GO: GO:0006094 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR008279 - InterPro: IPR006318 - InterPro: IPR006319 - InterPro: IPR018274 - InterPro: IPR023151 - InterPro: IPR000121 - InterPro: IPR002192 - InterPro: IPR015813 - Gene3D: G3DSA:3.30.1490.20 - Gene3D: G3DSA:3.30.470.20 - Gene3D: G3DSA:3.50.30.10 - Gene3D: G3DSA:3.20.20.60 - PRINTS: PR01736 - TIGRFAMs: TIGR01418
Pfam domain/function: PF00391 PEP-utilizers; PF02896 PEP-utilizers_C; PF01326 PPDK_N; SSF52009 PEP_mobile; SSF51621 Pyrv/PenolPyrv_Kinase_cat
EC number: =2.7.9.2
Molecular weight: Translated: 96408; Mature: 96277
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: PS00742 PEP_ENZYMES_2; PS00370 PEP_ENZYMES_PHOS_SITE
Important sites: ACT_SITE 433-433 ACT_SITE 809-809 BINDING 523-523 BINDING 636-636 BINDING 738-738 BINDING 759-759 BINDING 760-760 BINDING 761-761 BINDING 762-762
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVDKSKALVLWLDEVTIEDIPIAGGKNASLGEMIRNLSPLGVKIPYGYVVTANAYYYFL CCCCCCCEEEEEEECCEEECCCCCCCCCCCHHHHHHCCCCCCEECCCCEEEEECEEEEEE DYNNLRDKIRKILEGLNTDDLKDLQRRGHEVRELIRGGTFPPDLEEAIKDYYNKLSEKYK ECCHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH THAVDVAVRSSATAEDLPDASFAGQQETYLNVVGAENVLVAIKNCFASLFTDRAIVYRER HHHEEEEECCCCCHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCHHHHHHHH FGFDHFKVGIAVGVQKMVRSDMGASGVMFTLDTETGFKDVVVINAAYGLGELLVRGEVTP CCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEEECCCCCHHHEECCCCC DEYIVFKPTLMKGYSAIIEKKLGRKDRKMIYGTGDERVKIVNVPKEDQKKFALNDDEILQ CCEEEECCHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCHHCCCCCCCHHHHHH LAKWGVLIEEHYSKKNGRWTPMDIEWAKDGILNELFVVQARPETVHSRKKENVVKIYKIK HHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCEEEEEECCCHHHHHHCCCCEEEEEEEC TPEEERKNRVIVKGIAVGDKIATGKARVLFDLKEADQFQEGEILVTDITDPDWEPVMKKA CCHHHHCCEEEEEEEEECCEECCCCEEEEEEEHHCCCCCCCCEEEEECCCCCHHHHHHHH AAIVTNRGGRTSHAAIVARELGIPAVVGTGNATEKIKTGEEITVSCAEGETGYVYEGKID HHHHCCCCCCCHHHHHHHHHCCCCEEEECCCCHHHHCCCCEEEEEEECCCCCEEEECEEC YEVEEINLENIPKPKTKIMMNIGNPESAFRYASLPNDGVGLAREEFIIANYIKIHPLALL EEEEEECCCCCCCCCCEEEEECCCCHHHEEECCCCCCCCCCCHHHEEEECHHEECEEEEE HYEDLKELYEKLERENLIDEKGFVQFKLIYHYANGRLANKLAKGKDKLRVNLRKILQDIE EHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHH NLTFGYEDKATYYIKKLSYGIAKIAAAFYPNPVIVRFSDFKSNEYANLIGGILFEPEEEN HCCCCCCCCHHEEHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHCCEEECCCCCC PMLGWRGASRYYSDVFKEAFGMECKAIIRVRNKMGLTNTKVMIPFCRTPEEGEKVLQVME CCEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHH EYGLRKGENGLEVYVMAELPSNIVLADRYAQIFDGFSIGSNDLTQLTLGLDRDSELVAHL HHCCCCCCCCCEEEEEEECCCCEEEHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHH YDERNEAVKRLIAQLIKTAKEYGRKVGICGQAPSDFPEFAQFLVEQGIDSISLNPDSVLK HHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHH TMLAVVEMEKKLGVLK HHHHHHHHHHHCCCCC >Mature Secondary Structure SVDKSKALVLWLDEVTIEDIPIAGGKNASLGEMIRNLSPLGVKIPYGYVVTANAYYYFL CCCCCCEEEEEEECCEEECCCCCCCCCCCHHHHHHCCCCCCEECCCCEEEEECEEEEEE DYNNLRDKIRKILEGLNTDDLKDLQRRGHEVRELIRGGTFPPDLEEAIKDYYNKLSEKYK ECCHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH THAVDVAVRSSATAEDLPDASFAGQQETYLNVVGAENVLVAIKNCFASLFTDRAIVYRER HHHEEEEECCCCCHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCHHHHHHHH FGFDHFKVGIAVGVQKMVRSDMGASGVMFTLDTETGFKDVVVINAAYGLGELLVRGEVTP CCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEEECCCCCHHHEECCCCC DEYIVFKPTLMKGYSAIIEKKLGRKDRKMIYGTGDERVKIVNVPKEDQKKFALNDDEILQ CCEEEECCHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCHHCCCCCCCHHHHHH LAKWGVLIEEHYSKKNGRWTPMDIEWAKDGILNELFVVQARPETVHSRKKENVVKIYKIK HHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCEEEEEECCCHHHHHHCCCCEEEEEEEC TPEEERKNRVIVKGIAVGDKIATGKARVLFDLKEADQFQEGEILVTDITDPDWEPVMKKA CCHHHHCCEEEEEEEEECCEECCCCEEEEEEEHHCCCCCCCCEEEEECCCCCHHHHHHHH AAIVTNRGGRTSHAAIVARELGIPAVVGTGNATEKIKTGEEITVSCAEGETGYVYEGKID HHHHCCCCCCCHHHHHHHHHCCCCEEEECCCCHHHHCCCCEEEEEEECCCCCEEEECEEC YEVEEINLENIPKPKTKIMMNIGNPESAFRYASLPNDGVGLAREEFIIANYIKIHPLALL EEEEEECCCCCCCCCCEEEEECCCCHHHEEECCCCCCCCCCCHHHEEEECHHEECEEEEE HYEDLKELYEKLERENLIDEKGFVQFKLIYHYANGRLANKLAKGKDKLRVNLRKILQDIE EHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHH NLTFGYEDKATYYIKKLSYGIAKIAAAFYPNPVIVRFSDFKSNEYANLIGGILFEPEEEN HCCCCCCCCHHEEHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHCCEEECCCCCC PMLGWRGASRYYSDVFKEAFGMECKAIIRVRNKMGLTNTKVMIPFCRTPEEGEKVLQVME CCEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHH EYGLRKGENGLEVYVMAELPSNIVLADRYAQIFDGFSIGSNDLTQLTLGLDRDSELVAHL HHCCCCCCCCCEEEEEEECCCCEEEHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHH YDERNEAVKRLIAQLIKTAKEYGRKVGICGQAPSDFPEFAQFLVEQGIDSISLNPDSVLK HHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHH TMLAVVEMEKKLGVLK HHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9537320