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Identifier: 16520020

GI number: 16520020

Start: 104121

End: 104324

Strand: Reverse

Name: Not Available

Synonym: NGR_a00850

Alternate gene names: NA

Gene position: 104324-104121 (Counterclockwise)

Preceding gene: 16520019

Following gene: 16520021

Centisome position: 19.46

GC content: 51.47

Gene sequence:

>204_bases
ATGACAGATCTTGAAGAACTCAAGCAGAGGGTTCAAAAACTGCAGTCACGCGCTGCGACTGCGAAGACGCAATTGCATGA
CCTTGCCGAGTGCCTTCCGAACTATTGGACCGAAATAGTGGCCGTCGCCGAAAAAACATTCGACGCTTTTGCTCAGTTGG
ACGCTGCCAAAAGAGAACTCGCCGCGTCGGAGAATTCACGATGA

Upstream 100 bases:

>100_bases
TGCGCCAAGACTGGCACGAAGTTGGTCAAGGATGCGATCAAAAGCATCGAAACTTATCCGGACGTGGCGCGGGCATAATG
TGCCTGCAAGGAATAAGACC

Downstream 100 bases:

>100_bases
AAAGCTCGTTCGTGACCCGCCGCTTCAGCTGGTGCCGGAATATCTATTATGCATCGGCTGCGGCTGCTGACTCGGGGCGC
GAGGTATGCACCTTCACGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 67; Mature: 66

Protein sequence:

>67_residues
MTDLEELKQRVQKLQSRAATAKTQLHDLAECLPNYWTEIVAVAEKTFDAFAQLDAAKRELAASENSR

Sequences:

>Translated_67_residues
MTDLEELKQRVQKLQSRAATAKTQLHDLAECLPNYWTEIVAVAEKTFDAFAQLDAAKRELAASENSR
>Mature_66_residues
TDLEELKQRVQKLQSRAATAKTQLHDLAECLPNYWTEIVAVAEKTFDAFAQLDAAKRELAASENSR

Specific function: Unknown

COG id: COG5420

COG function: function code S; Uncharacterized conserved small protein containing a coiled-coil domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0437 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4XE_RHISN (P55696)

Other databases:

- EMBL:   U00090
- PIR:   T10832
- RefSeq:   NP_444140.1
- ProteinModelPortal:   P55696
- SMR:   P55696
- GeneID:   962236
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a00850
- HOGENOM:   HBG531119
- ProtClustDB:   CLSK809021
- InterPro:   IPR007774
- PIRSF:   PIRSF037676

Pfam domain/function: PF05082 DUF683

EC number: NA

Molecular weight: Translated: 7565; Mature: 7433

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDLEELKQRVQKLQSRAATAKTQLHDLAECLPNYWTEIVAVAEKTFDAFAQLDAAKREL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AASENSR
HHCCCCC
>Mature Secondary Structure 
TDLEELKQRVQKLQSRAATAKTQLHDLAECLPNYWTEIVAVAEKTFDAFAQLDAAKREL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AASENSR
HHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424