Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 16520019

GI number: 16520019

Start: 104347

End: 104835

Strand: Reverse

Name: Not Available

Synonym: NGR_a00860

Alternate gene names: NA

Gene position: 104835-104347 (Counterclockwise)

Preceding gene: 16519994

Following gene: 16520020

Centisome position: 19.55

GC content: 57.06

Gene sequence:

>489_bases
ATGATGACAGCGTTATCTGATCCCCGGTTTACTCGAGCTGTCAGTGACGATGGATCGTTGGCCACCCCTTTCATGAAATG
CCTCGCGCGGTTGGTCCGCGCTCATGATTCCTACGGATTATGGAAGGATAAATGTGACGCCGAGTTGCTGGCCAACTTCA
CAGTTACGGAGGAGCAGCGGCGAGCTATCCCCGTCATCGGCGACCCCGAGCCAGACGTGCTGTTGAGGCTCGACCTTTTT
TACGCCGCCGTCGGCGTCGTTATCGAGGAGCGCTCGGGGCTTTTGATCTCGCGAACGCTGGAGATCAGCGATGAGGGCAT
CGGCCGAGTGCTCTTCACAACCAGGCGGCTGGTGGTGCTGTCGAAGACCCTACGTGACGTTCACCGGTTCGGCTTCAATA
CACTTGGCAAATGCGCCAAGACTGGCACGAAGTTGGTCAAGGATGCGATCAAAAGCATCGAAACTTATCCGGACGTGGCG
CGGGCATAA

Upstream 100 bases:

>100_bases
ATGAATTTTGCATGGAGAGAGACAGACGGTTGGTAGTATTGCCGGCCACTCACGGGATCGCCTCGATTAAAGAGGGCCCG
TGCTTCAGGACGAGGACTAA

Downstream 100 bases:

>100_bases
TGTGCCTGCAAGGAATAAGACCATGACAGATCTTGAAGAACTCAAGCAGAGGGTTCAAAAACTGCAGTCACGCGCTGCGA
CTGCGAAGACGCAATTGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MMTALSDPRFTRAVSDDGSLATPFMKCLARLVRAHDSYGLWKDKCDAELLANFTVTEEQRRAIPVIGDPEPDVLLRLDLF
YAAVGVVIEERSGLLISRTLEISDEGIGRVLFTTRRLVVLSKTLRDVHRFGFNTLGKCAKTGTKLVKDAIKSIETYPDVA
RA

Sequences:

>Translated_162_residues
MMTALSDPRFTRAVSDDGSLATPFMKCLARLVRAHDSYGLWKDKCDAELLANFTVTEEQRRAIPVIGDPEPDVLLRLDLF
YAAVGVVIEERSGLLISRTLEISDEGIGRVLFTTRRLVVLSKTLRDVHRFGFNTLGKCAKTGTKLVKDAIKSIETYPDVA
RA
>Mature_162_residues
MMTALSDPRFTRAVSDDGSLATPFMKCLARLVRAHDSYGLWKDKCDAELLANFTVTEEQRRAIPVIGDPEPDVLLRLDLF
YAAVGVVIEERSGLLISRTLEISDEGIGRVLFTTRRLVVLSKTLRDVHRFGFNTLGKCAKTGTKLVKDAIKSIETYPDVA
RA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0460 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4XD_RHISN (P55695)

Other databases:

- EMBL:   U00090
- PIR:   T10831
- RefSeq:   NP_444139.1
- GeneID:   962503
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a00860
- HOGENOM:   HBG295220
- InterPro:   IPR004952
- TIGRFAMs:   TIGR02935

Pfam domain/function: PF03270 DUF269

EC number: NA

Molecular weight: Translated: 18015; Mature: 18015

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTALSDPRFTRAVSDDGSLATPFMKCLARLVRAHDSYGLWKDKCDAELLANFTVTEEQR
CCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHCCCCCHHHH
RAIPVIGDPEPDVLLRLDLFYAAVGVVIEERSGLLISRTLEISDEGIGRVLFTTRRLVVL
CCCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHH
SKTLRDVHRFGFNTLGKCAKTGTKLVKDAIKSIETYPDVARA
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCC
>Mature Secondary Structure
MMTALSDPRFTRAVSDDGSLATPFMKCLARLVRAHDSYGLWKDKCDAELLANFTVTEEQR
CCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHCCCCCHHHH
RAIPVIGDPEPDVLLRLDLFYAAVGVVIEERSGLLISRTLEISDEGIGRVLFTTRRLVVL
CCCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHH
SKTLRDVHRFGFNTLGKCAKTGTKLVKDAIKSIETYPDVARA
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424