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Identifier: 16520015

GI number: 16520015

Start: 110150

End: 110557

Strand: Reverse

Name: Not Available

Synonym: NGR_a00900

Alternate gene names: NA

Gene position: 110557-110150 (Counterclockwise)

Preceding gene: 16520008

Following gene: 16520016

Centisome position: 20.62

GC content: 50.25

Gene sequence:

>408_bases
ATGTCCAGGACCGCAGAAAAGCCCTTCGAAACTGTCGAAAACTCGATCGTCGGTCAATCCACGGCAATCAATAGGGGCGA
GCAATTGACGCATGCTATTGAGTTACAGGAGCTGGCCGGATCCGTCTTCAAGTCAACAATGATGGTGGGATTTGAACTGT
CGCTGAACACTTTCGCTGCAGTCCAAGCCAACACCTTCGCTAATTTGCACCATCTTAGCGAGTTTCTCGGGGCAAAATCG
CCGTCCCAAGTTTTCGACCTACAGTGTTCCTTCCTGCGCAAGCGTATAGACATGGGTGTCGAGCAGGTCAAAGAATCCCA
GGCGCTCAGCACCAAGGCTTTGATTGATATGTCGAAGCCAATCAAGGAATTCTTTGAAAAGGCTATAGCAGACCTCAAGA
CGGCCTGA

Upstream 100 bases:

>100_bases
TGAAGATTTCACAATACTATTCAATTGAGTTCTTGCGACAAATGGGCGTTGACGATGTGCAAGATGGTCGCCAGAGCCGC
CGTAACGAGAGGAAAGCGAA

Downstream 100 bases:

>100_bases
TCGTCAGCGATCCCCGCCGTGGCAGGCCGTGACCCGCCACGGCTTTGCGCTCAGTAGCCTGGAGTACCATTCGATGATTT
CCGCCGATTTGTCGGATTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MSRTAEKPFETVENSIVGQSTAINRGEQLTHAIELQELAGSVFKSTMMVGFELSLNTFAAVQANTFANLHHLSEFLGAKS
PSQVFDLQCSFLRKRIDMGVEQVKESQALSTKALIDMSKPIKEFFEKAIADLKTA

Sequences:

>Translated_135_residues
MSRTAEKPFETVENSIVGQSTAINRGEQLTHAIELQELAGSVFKSTMMVGFELSLNTFAAVQANTFANLHHLSEFLGAKS
PSQVFDLQCSFLRKRIDMGVEQVKESQALSTKALIDMSKPIKEFFEKAIADLKTA
>Mature_134_residues
SRTAEKPFETVENSIVGQSTAINRGEQLTHAIELQELAGSVFKSTMMVGFELSLNTFAAVQANTFANLHHLSEFLGAKSP
SQVFDLQCSFLRKRIDMGVEQVKESQALSTKALIDMSKPIKEFFEKAIADLKTA

Specific function: Unknown

COG id: COG5490

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4WP_RHISN (P55694)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_444135.1
- GeneID:   962245
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a00900
- InterPro:   IPR018968

Pfam domain/function: PF09361 Phasin_2

EC number: NA

Molecular weight: Translated: 14899; Mature: 14768

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRTAEKPFETVENSIVGQSTAINRGEQLTHAIELQELAGSVFKSTMMVGFELSLNTFAA
CCCCCCCHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHH
VQANTFANLHHLSEFLGAKSPSQVFDLQCSFLRKRIDMGVEQVKESQALSTKALIDMSKP
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IKEFFEKAIADLKTA
HHHHHHHHHHHHCCC
>Mature Secondary Structure 
SRTAEKPFETVENSIVGQSTAINRGEQLTHAIELQELAGSVFKSTMMVGFELSLNTFAA
CCCCCCHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHH
VQANTFANLHHLSEFLGAKSPSQVFDLQCSFLRKRIDMGVEQVKESQALSTKALIDMSKP
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IKEFFEKAIADLKTA
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424