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Identifier: 16520008

GI number: 16520008

Start: 119317

End: 119754

Strand: Reverse

Name: Not Available

Synonym: NGR_a00970

Alternate gene names: NA

Gene position: 119754-119317 (Counterclockwise)

Preceding gene: 16520007

Following gene: 16520015

Centisome position: 22.34

GC content: 53.65

Gene sequence:

>438_bases
GTGAAACATATCGTTGCAACCTTATTCGGGATACTGTTTGCTACAGCTGCCAATGCCGCCGGCGATAGTCATGTACTGGC
GAGCTTTCCCGAGCTTGAACGCGCGCTGACTACCGGCAAACCGGTGACTGTGACGGTCGATTTAGGCATGTGCACTCCGG
CGACTTCCGATACACCGTCGACCAAGACGCGTGGAGGCGTTAGCATAGACGGCTATAGGATCACATCTGACGGCACCCTC
GCTTTTGCAGATCAGCATTTTACCATAGATCGTGACGGTAAGCCGGTTATCCAGTTTCTTCGTTACCGGATCCGGCCGGA
CGGTGGCGCCGAATTCACCATGGTCGTCTTCAATGTGCCCAGTTACGAGCGAAAAGGAACGAGCCGGGTCTATAAGTGCT
CAATTGGTCACGGATTGAGCTTCTTCTCTTCACAGTGA

Upstream 100 bases:

>100_bases
CCGAAGCCGCACTCTCCCGCGCCCTGCTTGAAACCGCCGAGCCCCCGGTTCGCCCGCAGGGGCCGTGTCAACCGTATAGT
CGCTCTAAAGAGGACCACCT

Downstream 100 bases:

>100_bases
TCTGGCATGTTGCAGCACGATCGCGCGGGTTCGGGTGGCGGATCGTCCCGGATCGGCGGCTGAAGGTTTCCCTGGGGCAC
CCGCCCGTGCCATTTGCAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MKHIVATLFGILFATAANAAGDSHVLASFPELERALTTGKPVTVTVDLGMCTPATSDTPSTKTRGGVSIDGYRITSDGTL
AFADQHFTIDRDGKPVIQFLRYRIRPDGGAEFTMVVFNVPSYERKGTSRVYKCSIGHGLSFFSSQ

Sequences:

>Translated_145_residues
MKHIVATLFGILFATAANAAGDSHVLASFPELERALTTGKPVTVTVDLGMCTPATSDTPSTKTRGGVSIDGYRITSDGTL
AFADQHFTIDRDGKPVIQFLRYRIRPDGGAEFTMVVFNVPSYERKGTSRVYKCSIGHGLSFFSSQ
>Mature_145_residues
MKHIVATLFGILFATAANAAGDSHVLASFPELERALTTGKPVTVTVDLGMCTPATSDTPSTKTRGGVSIDGYRITSDGTL
AFADQHFTIDRDGKPVIQFLRYRIRPDGGAEFTMVVFNVPSYERKGTSRVYKCSIGHGLSFFSSQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4WH_RHISN (P55686)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_444128.1
- GeneID:   962489
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a00970
- HOGENOM:   HBG756411
- ProtClustDB:   CLSK861986
- InterPro:   IPR010694

Pfam domain/function: PF06903 VirK

EC number: NA

Molecular weight: Translated: 15639; Mature: 15639

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHIVATLFGILFATAANAAGDSHVLASFPELERALTTGKPVTVTVDLGMCTPATSDTPS
CHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCC
TKTRGGVSIDGYRITSDGTLAFADQHFTIDRDGKPVIQFLRYRIRPDGGAEFTMVVFNVP
CCCCCCEEECCEEECCCCEEEEECCEEEECCCCHHHHHHHHHHCCCCCCCEEEEEEEECC
SYERKGTSRVYKCSIGHGLSFFSSQ
CCCCCCCCEEEEEECCCCCCCCCCC
>Mature Secondary Structure
MKHIVATLFGILFATAANAAGDSHVLASFPELERALTTGKPVTVTVDLGMCTPATSDTPS
CHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCC
TKTRGGVSIDGYRITSDGTLAFADQHFTIDRDGKPVIQFLRYRIRPDGGAEFTMVVFNVP
CCCCCCEEECCEEECCCCEEEEECCEEEECCCCHHHHHHHHHHCCCCCCCEEEEEEEECC
SYERKGTSRVYKCSIGHGLSFFSSQ
CCCCCCCCEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424