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Identifier: 16520010

GI number: 16520010

Start: 117217

End: 117594

Strand: Direct

Name: Not Available

Synonym: NGR_a00950

Alternate gene names: NA

Gene position: 117217-117594 (Clockwise)

Preceding gene: 16520011

Following gene: 16520009

Centisome position: 21.86

GC content: 55.03

Gene sequence:

>378_bases
ATGCCGCGAGCTGACGTAGAGCGATTCGTCAACGATTTAGACAAAGGCAGGCTGCCTGCAAACCTCAAGCCAAGTGCCAC
GGGTCTTGCACCGATCGTAGCGGCCGGAAAGAGTCTCGGCTACAACATCACGCTTGACGAAGTTCAAAACTACATCCGAT
TGGACAGCCGACGGAAGTCTACTGGCAAGAAGCTCGAAGCGATGGCGAACAGCAAGCGTGGCTCGCGCGTTCCGGCCTTG
CCGCGCTTAGTACAATCTAGTGCTTTGGATAGTCCCGTTACGGATGGGCTCACGCGGCCGTTGCATATTGCTGAAAAAGG
CGCCGCCGTCGCCGCGGTCGTTCAACTTGTTGTAATTGTTGTTCATGTTTCAAGCTGA

Upstream 100 bases:

>100_bases
AAATGCACAAAATGACGACATTTTTAGGTTGGCACGGCGCTTGCTCGTTCACGGCATCATCCACGCCTGCAATTGGCAAC
TATGAGCAAAGGAATTAGCT

Downstream 100 bases:

>100_bases
TTTTTTACCGGAGCGCATTGGCTTGGACGATCGGTGCCAAGAGAGCATGACAGCAAATATCATCGGGAACGAGACATGCG
ATCTGGCCTACAAGAAACGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 124

Protein sequence:

>125_residues
MPRADVERFVNDLDKGRLPANLKPSATGLAPIVAAGKSLGYNITLDEVQNYIRLDSRRKSTGKKLEAMANSKRGSRVPAL
PRLVQSSALDSPVTDGLTRPLHIAEKGAAVAAVVQLVVIVVHVSS

Sequences:

>Translated_125_residues
MPRADVERFVNDLDKGRLPANLKPSATGLAPIVAAGKSLGYNITLDEVQNYIRLDSRRKSTGKKLEAMANSKRGSRVPAL
PRLVQSSALDSPVTDGLTRPLHIAEKGAAVAAVVQLVVIVVHVSS
>Mature_124_residues
PRADVERFVNDLDKGRLPANLKPSATGLAPIVAAGKSLGYNITLDEVQNYIRLDSRRKSTGKKLEAMANSKRGSRVPALP
RLVQSSALDSPVTDGLTRPLHIAEKGAAVAAVVQLVVIVVHVSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4WJ_RHISN (P55688)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_444130.1
- GeneID:   962234
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a00950
- ProtClustDB:   CLSK563547

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13293; Mature: 13161

Theoretical pI: Translated: 10.83; Mature: 10.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRADVERFVNDLDKGRLPANLKPSATGLAPIVAAGKSLGYNITLDEVQNYIRLDSRRKS
CCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHH
TGKKLEAMANSKRGSRVPALPRLVQSSALDSPVTDGLTRPLHIAEKGAAVAAVVQLVVIV
HHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
VHVSS
HHCCC
>Mature Secondary Structure 
PRADVERFVNDLDKGRLPANLKPSATGLAPIVAAGKSLGYNITLDEVQNYIRLDSRRKS
CHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHH
TGKKLEAMANSKRGSRVPALPRLVQSSALDSPVTDGLTRPLHIAEKGAAVAAVVQLVVIV
HHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
VHVSS
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424