Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 16520009

GI number: 16520009

Start: 117628

End: 119169

Strand: Direct

Name: Not Available

Synonym: NGR_a00960

Alternate gene names: NA

Gene position: 117628-119169 (Clockwise)

Preceding gene: 16520010

Following gene: 16519985

Centisome position: 21.94

GC content: 58.56

Gene sequence:

>1542_bases
GTGCCAAGAGAGCATGACAGCAAATATCATCGGGAACGAGACATGCGATCTGGCCTACAAGAAACGGCTTCAAGGGCTCA
CCTTTATAAAGGCGAATATTGGCGACAGATCTTTAACCGGCGCACGCCGGAGCAACGGCGCACCTTGTCGCACATCAAGC
GTTTCATGGAACGGCTGGCTGGTGACATAAAGTTCCGCACCGCGGTTTCGGAGAGCGTCGACGCCCCTCGCGCGGTAACA
GAGCGCTATGGCATTGAAGTTGACCCACTGGAGATACTGCCGCTCTGGCGCGATGATCATCTTACTTACCGCTACAAGCC
GGAGTCTGCCCCATGGCCGCTGTCGATAATGTGGGACGAGTACATGCGCGACATGTTGCGCCATCGCGACCTCCTGCGCG
ACCATGGCGATATGTCAATGACCAACCCTCGCTTTCATGCCTGGCGCGAGCGCCAAATTCGGCGTTGTAATGACGAATTG
GGCGGATCAGCGCCGTCGATCACGCACCCCATCATCGCTTTCGAGCTGAGCGAAGGGTGCACCGTCGGTTGCTGGTTCTG
CGGCCTCTCGGCCGCTCCGTTCAAAGGCTATTACGAGTATAGCAAACAGCATGCAGAGCTTTGGCGCGGCGTGGTTGGTG
TCGCGAGCGAGGTGTTTGGCCCGGCAGCTCGTACTGGATTCTGCTACTGGGCCACAGAGCCAATGGACAACCCGCAGTAC
GACCGCTTTCTCTTCGACTACTATCAGATCACGGGCGCATTGCCGCAAACAACGACGGCCGCCCCGCTCAAGGATGAGGC
ACTCACCAGGCGCGTGCTCGGCCTCTTCAATCTTTATGGCACTACGATGAATCGCTTCTCTGTGCTCAGCACGGCACATC
TCAATCAGATCCACAGGGCGTTTTCGCCTGAAGAACTGACAGGGGTCGAACTCATCATGCAGGGCAAGGACGCTCCGACC
GCAAAGGCTTTCACGGGGCGGGCGCGCAAGCGGAAGGAGAAACTCAGTGCGAGGCAAGAGGCAATCGCCTTTCCGGAGCG
AAATCACACGACGATCGCCTGTGTTTCCGGCTTCCTCGTAAATATGCCGCAGAGACGTTTGCAACTAGTGACGCCGGTAC
CGGGTAGCGGACGCTGGCCCCTCGGGTATCGCATAGTGGGTCAACGGTCATTCAGGACGCCTGACGAGTTCCGGGACGGG
CTCAAGAGCATGATTGATCAACATATGCTCGAGAGCCCAGCCCCCGACCTGCCGATCCGCTTTCGCAGGGACCTGGAGTA
CACAGCGGGAGACCGCTGCTTCCATCTCCGCTCGCGAAGCATGGAACACCGGGTGCTCGACTACGCTCCGATCTCGGTTG
GCCATCTAATCGCGTGCGGCAACTTTACAGCCTCGGAGTTGGTTATGCGGGCCTCGACGGATGGAATAAGCGTACTTGCT
GTCGCCGACCTGCTCGATCAGTTATACGCGGCCGGCGTGATCGAAGAGGACCTCGATGACCGCTATGCTTGGCAGACCAG
CGACGGCATAACAGACCGCTGA

Upstream 100 bases:

>100_bases
TGAAAAAGGCGCCGCCGTCGCCGCGGTCGTTCAACTTGTTGTAATTGTTGTTCATGTTTCAAGCTGATTTTTTACCGGAG
CGCATTGGCTTGGACGATCG

Downstream 100 bases:

>100_bases
AGAAGCTCAAGGATAGCGGCAGGCGGGTTCCTTTACCTATCGGGACCACTGCAAATGGCACGGGCGGGTGCCCCAGGGAA
ACCTTCAGCCGCCGATCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 513; Mature: 512

Protein sequence:

>513_residues
MPREHDSKYHRERDMRSGLQETASRAHLYKGEYWRQIFNRRTPEQRRTLSHIKRFMERLAGDIKFRTAVSESVDAPRAVT
ERYGIEVDPLEILPLWRDDHLTYRYKPESAPWPLSIMWDEYMRDMLRHRDLLRDHGDMSMTNPRFHAWRERQIRRCNDEL
GGSAPSITHPIIAFELSEGCTVGCWFCGLSAAPFKGYYEYSKQHAELWRGVVGVASEVFGPAARTGFCYWATEPMDNPQY
DRFLFDYYQITGALPQTTTAAPLKDEALTRRVLGLFNLYGTTMNRFSVLSTAHLNQIHRAFSPEELTGVELIMQGKDAPT
AKAFTGRARKRKEKLSARQEAIAFPERNHTTIACVSGFLVNMPQRRLQLVTPVPGSGRWPLGYRIVGQRSFRTPDEFRDG
LKSMIDQHMLESPAPDLPIRFRRDLEYTAGDRCFHLRSRSMEHRVLDYAPISVGHLIACGNFTASELVMRASTDGISVLA
VADLLDQLYAAGVIEEDLDDRYAWQTSDGITDR

Sequences:

>Translated_513_residues
MPREHDSKYHRERDMRSGLQETASRAHLYKGEYWRQIFNRRTPEQRRTLSHIKRFMERLAGDIKFRTAVSESVDAPRAVT
ERYGIEVDPLEILPLWRDDHLTYRYKPESAPWPLSIMWDEYMRDMLRHRDLLRDHGDMSMTNPRFHAWRERQIRRCNDEL
GGSAPSITHPIIAFELSEGCTVGCWFCGLSAAPFKGYYEYSKQHAELWRGVVGVASEVFGPAARTGFCYWATEPMDNPQY
DRFLFDYYQITGALPQTTTAAPLKDEALTRRVLGLFNLYGTTMNRFSVLSTAHLNQIHRAFSPEELTGVELIMQGKDAPT
AKAFTGRARKRKEKLSARQEAIAFPERNHTTIACVSGFLVNMPQRRLQLVTPVPGSGRWPLGYRIVGQRSFRTPDEFRDG
LKSMIDQHMLESPAPDLPIRFRRDLEYTAGDRCFHLRSRSMEHRVLDYAPISVGHLIACGNFTASELVMRASTDGISVLA
VADLLDQLYAAGVIEEDLDDRYAWQTSDGITDR
>Mature_512_residues
PREHDSKYHRERDMRSGLQETASRAHLYKGEYWRQIFNRRTPEQRRTLSHIKRFMERLAGDIKFRTAVSESVDAPRAVTE
RYGIEVDPLEILPLWRDDHLTYRYKPESAPWPLSIMWDEYMRDMLRHRDLLRDHGDMSMTNPRFHAWRERQIRRCNDELG
GSAPSITHPIIAFELSEGCTVGCWFCGLSAAPFKGYYEYSKQHAELWRGVVGVASEVFGPAARTGFCYWATEPMDNPQYD
RFLFDYYQITGALPQTTTAAPLKDEALTRRVLGLFNLYGTTMNRFSVLSTAHLNQIHRAFSPEELTGVELIMQGKDAPTA
KAFTGRARKRKEKLSARQEAIAFPERNHTTIACVSGFLVNMPQRRLQLVTPVPGSGRWPLGYRIVGQRSFRTPDEFRDGL
KSMIDQHMLESPAPDLPIRFRRDLEYTAGDRCFHLRSRSMEHRVLDYAPISVGHLIACGNFTASELVMRASTDGISVLAV
ADLLDQLYAAGVIEEDLDDRYAWQTSDGITDR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4WI_RHISN (P55687)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_444129.1
- GeneID:   962235
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a00960
- HOGENOM:   HBG654568
- ProtClustDB:   CLSK784554

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59023; Mature: 58891

Theoretical pI: Translated: 8.04; Mature: 8.04

Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPREHDSKYHRERDMRSGLQETASRAHLYKGEYWRQIFNRRTPEQRRTLSHIKRFMERLA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
GDIKFRTAVSESVDAPRAVTERYGIEVDPLEILPLWRDDHLTYRYKPESAPWPLSIMWDE
CCCCHHHHHHHHCCCCHHHHHHCCCCCCCCEEEEEECCCCEEEEECCCCCCCCEEHHHHH
YMRDMLRHRDLLRDHGDMSMTNPRFHAWRERQIRRCNDELGGSAPSITHPIIAFELSEGC
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCC
TVGCWFCGLSAAPFKGYYEYSKQHAELWRGVVGVASEVFGPAARTGFCYWATEPMDNPQY
EEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCEEEEECCCCCCCCH
DRFLFDYYQITGALPQTTTAAPLKDEALTRRVLGLFNLYGTTMNRFSVLSTAHLNQIHRA
HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSPEELTGVELIMQGKDAPTAKAFTGRARKRKEKLSARQEAIAFPERNHTTIACVSGFLV
CCCCHHCCCHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHH
NMPQRRLQLVTPVPGSGRWPLGYRIVGQRSFRTPDEFRDGLKSMIDQHMLESPAPDLPIR
CCCHHHEEEECCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCH
FRRDLEYTAGDRCFHLRSRSMEHRVLDYAPISVGHLIACGNFTASELVMRASTDGISVLA
HHCCCCCCCCCCEEHHHHHCHHHHHHHCCCCCCCCEEEECCCCHHHHHHHCCCCCHHHHH
VADLLDQLYAAGVIEEDLDDRYAWQTSDGITDR
HHHHHHHHHHCCCHHHHCCCCEEECCCCCCCCC
>Mature Secondary Structure 
PREHDSKYHRERDMRSGLQETASRAHLYKGEYWRQIFNRRTPEQRRTLSHIKRFMERLA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
GDIKFRTAVSESVDAPRAVTERYGIEVDPLEILPLWRDDHLTYRYKPESAPWPLSIMWDE
CCCCHHHHHHHHCCCCHHHHHHCCCCCCCCEEEEEECCCCEEEEECCCCCCCCEEHHHHH
YMRDMLRHRDLLRDHGDMSMTNPRFHAWRERQIRRCNDELGGSAPSITHPIIAFELSEGC
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCC
TVGCWFCGLSAAPFKGYYEYSKQHAELWRGVVGVASEVFGPAARTGFCYWATEPMDNPQY
EEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCEEEEECCCCCCCCH
DRFLFDYYQITGALPQTTTAAPLKDEALTRRVLGLFNLYGTTMNRFSVLSTAHLNQIHRA
HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSPEELTGVELIMQGKDAPTAKAFTGRARKRKEKLSARQEAIAFPERNHTTIACVSGFLV
CCCCHHCCCHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHH
NMPQRRLQLVTPVPGSGRWPLGYRIVGQRSFRTPDEFRDGLKSMIDQHMLESPAPDLPIR
CCCHHHEEEECCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCH
FRRDLEYTAGDRCFHLRSRSMEHRVLDYAPISVGHLIACGNFTASELVMRASTDGISVLA
HHCCCCCCCCCCEEHHHHHCHHHHHHHCCCCCCCCEEEECCCCHHHHHHHCCCCCHHHHH
VADLLDQLYAAGVIEEDLDDRYAWQTSDGITDR
HHHHHHHHHHCCCHHHHCCCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424