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The map label for this gene is nifN

Identifier: 16519996

GI number: 16519996

Start: 134001

End: 135410

Strand: Reverse

Name: nifN

Synonym: NGR_a01090

Alternate gene names: 16519996

Gene position: 135410-134001 (Counterclockwise)

Preceding gene: 16519995

Following gene: 16519997

Centisome position: 25.26

GC content: 59.43

Gene sequence:

>1410_bases
ATGGTCCACATCCATCGCCAATCTAAATCAGCGACGGTCAATCCGCTCAAGTCGTCCCAACCGCTGGGTGCCGCGTTAGC
CTTTCTCGGGGTCGATGGCGCGATACCGCTGTTCCACGGCAGCCAAGGCTGCACTAGCTTCGCGCTAGTGCTGTGCGTGC
GCCATTTCAAGGAAACGATCCCGCTGCAGACGACGGCAATGGACGAATTGGCAACAGTCTTGGGCGGGGCAGCCCATCTG
GAAGAGGCGATTCTGAACTTGAAAAAGCGGGCGAATCCGCGGCTGATCGGAATCTGCACGACGGCACTTGTGGAAACCCG
TTCTGAAGATTTCGCAAGGCAAATCGCCAACATCAAAATGACGCATGCGGAGGAACTTGCAGGCACAGAGGTCGTGCTGG
CAAACACGCCGGATTTCGATGGCGCCTTGGAGGAGGGCTGGGCGAGGGCCGTCGCCGCGATGATCCAACAGATTACACTG
CGGCGTCAGCAGGCGCCTCGCTCGAGAAAGGCAACACTGATCGAGAGGATTACAAAACCTAGCGAGCAGCCGTGGAAGCA
ACAGAAGGTTGCGATCCTGCCGGGATGGCACCTCACGGTAGGCGATATCGAGCAGTTGCGCGAGATGGTGGAAGGTTTCG
GGCTGAGGCCGGTGATCGTGCCGGACGTCTCAGGCTCCCTCGACGGTACGGTGCCCGACCGCTGGATGCCGACAGCGTAT
GGAGGTACAAGCATCGAGGATATACAGGAGTTGGGTAGGGCGGTGCGGTGCATCGCCATCGGGGAACATATGCGGCGCCC
GGCTGAGCTACTGCAGACGTTGACGGGTGTGCCTTACGTGTTGGTCCAGTCGCTAACGGGATTGAAGAACGTCGACCAGT
TTGTCTCGCTTCTTTCCGAGATTTCCTGCGTGCCGGCGCCGGCGAAGATCCACCGTCACCGCTCACAGCTGCAAGACGCG
CTTCTCGACGGACACTTCCATTTCGCCGGCAAGAAGATCGCGATCGCCACCGAGCCGGACCAGTTGTACCAATTTGCCAC
CTTTTTTACGGGACTTGGCGCCGAGATCATCTCGGCCGTTACGACTACGGGTGAGTCAGAAATTATCGAGAAAGTCCCGG
CCGAAAAGGTCCAGATCGGCGATCTCGGTGATCTCGAAGATCTAGCCGGCGGCGCTGATCTTCTCGTTACCCATTCGCAC
GGTCGCCAGGCAGCGGAGCGCCTCGGCATCCCTCTGCTGCGGATCGGCTTCCCGATATTCGACCGCCTCGGCAGCCAGCA
CAAACTCACAGTTCTCTATCGTGGCACGCGCGACCTGATCTTCGAGGCGGCCAACATCATCCAGGCCAACCAGCCCGCGC
CGTCGCTTGAGCAAATCGATGCAATGCGAAAGCGGAGAAATGCCGGATGA

Upstream 100 bases:

>100_bases
ACCACTGCCGAACACGCGCCCCGACACCGATGCTACGAGTGTCGGGCGCTCAATTCGCCGGCACGACGCCGGTGACTTCG
TTGAGTGTTGAGGAAAGCAA

Downstream 100 bases:

>100_bases
ATTCCGTTCGTCGCCTCTCGCTCGTCACTGACGAAATCCAGCCGCGGCGTTCCGGCGCATTGCGCATAGCGATCGCGACG
CAGGACATGAAAGTCCTAAA

Product: nitrogenase molybdenum-cofactor biosynthesis protein NifN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 469; Mature: 469

Protein sequence:

>469_residues
MVHIHRQSKSATVNPLKSSQPLGAALAFLGVDGAIPLFHGSQGCTSFALVLCVRHFKETIPLQTTAMDELATVLGGAAHL
EEAILNLKKRANPRLIGICTTALVETRSEDFARQIANIKMTHAEELAGTEVVLANTPDFDGALEEGWARAVAAMIQQITL
RRQQAPRSRKATLIERITKPSEQPWKQQKVAILPGWHLTVGDIEQLREMVEGFGLRPVIVPDVSGSLDGTVPDRWMPTAY
GGTSIEDIQELGRAVRCIAIGEHMRRPAELLQTLTGVPYVLVQSLTGLKNVDQFVSLLSEISCVPAPAKIHRHRSQLQDA
LLDGHFHFAGKKIAIATEPDQLYQFATFFTGLGAEIISAVTTTGESEIIEKVPAEKVQIGDLGDLEDLAGGADLLVTHSH
GRQAAERLGIPLLRIGFPIFDRLGSQHKLTVLYRGTRDLIFEAANIIQANQPAPSLEQIDAMRKRRNAG

Sequences:

>Translated_469_residues
MVHIHRQSKSATVNPLKSSQPLGAALAFLGVDGAIPLFHGSQGCTSFALVLCVRHFKETIPLQTTAMDELATVLGGAAHL
EEAILNLKKRANPRLIGICTTALVETRSEDFARQIANIKMTHAEELAGTEVVLANTPDFDGALEEGWARAVAAMIQQITL
RRQQAPRSRKATLIERITKPSEQPWKQQKVAILPGWHLTVGDIEQLREMVEGFGLRPVIVPDVSGSLDGTVPDRWMPTAY
GGTSIEDIQELGRAVRCIAIGEHMRRPAELLQTLTGVPYVLVQSLTGLKNVDQFVSLLSEISCVPAPAKIHRHRSQLQDA
LLDGHFHFAGKKIAIATEPDQLYQFATFFTGLGAEIISAVTTTGESEIIEKVPAEKVQIGDLGDLEDLAGGADLLVTHSH
GRQAAERLGIPLLRIGFPIFDRLGSQHKLTVLYRGTRDLIFEAANIIQANQPAPSLEQIDAMRKRRNAG
>Mature_469_residues
MVHIHRQSKSATVNPLKSSQPLGAALAFLGVDGAIPLFHGSQGCTSFALVLCVRHFKETIPLQTTAMDELATVLGGAAHL
EEAILNLKKRANPRLIGICTTALVETRSEDFARQIANIKMTHAEELAGTEVVLANTPDFDGALEEGWARAVAAMIQQITL
RRQQAPRSRKATLIERITKPSEQPWKQQKVAILPGWHLTVGDIEQLREMVEGFGLRPVIVPDVSGSLDGTVPDRWMPTAY
GGTSIEDIQELGRAVRCIAIGEHMRRPAELLQTLTGVPYVLVQSLTGLKNVDQFVSLLSEISCVPAPAKIHRHRSQLQDA
LLDGHFHFAGKKIAIATEPDQLYQFATFFTGLGAEIISAVTTTGESEIIEKVPAEKVQIGDLGDLEDLAGGADLLVTHSH
GRQAAERLGIPLLRIGFPIFDRLGSQHKLTVLYRGTRDLIFEAANIIQANQPAPSLEQIDAMRKRRNAG

Specific function: This protein may play a role in the biosynthesis of the prosthetic group of nitrogenase (FeMo cofactor)

COG id: COG2710

COG function: function code C; Nitrogenase molybdenum-iron protein, alpha and beta chains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifD/nifK/nifE/nifN family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NIFN_RHISN (P55674)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_444116.1
- ProteinModelPortal:   P55674
- SMR:   P55674
- GeneID:   962483
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a01090
- HOGENOM:   HBG336444
- ProtClustDB:   PRK14476
- InterPro:   IPR000510
- InterPro:   IPR000318
- InterPro:   IPR005975
- TIGRFAMs:   TIGR01285

Pfam domain/function: PF00148 Oxidored_nitro

EC number: NA

Molecular weight: Translated: 51115; Mature: 51115

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: PS00699 NITROGENASE_1_1; PS00090 NITROGENASE_1_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVHIHRQSKSATVNPLKSSQPLGAALAFLGVDGAIPLFHGSQGCTSFALVLCVRHFKETI
CEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHHHHHC
PLQTTAMDELATVLGGAAHLEEAILNLKKRANPRLIGICTTALVETRSEDFARQIANIKM
CCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHCHH
THAEELAGTEVVLANTPDFDGALEEGWARAVAAMIQQITLRRQQAPRSRKATLIERITKP
HHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC
SEQPWKQQKVAILPGWHLTVGDIEQLREMVEGFGLRPVIVPDVSGSLDGTVPDRWMPTAY
CCCCHHHCCEEECCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCC
GGTSIEDIQELGRAVRCIAIGEHMRRPAELLQTLTGVPYVLVQSLTGLKNVDQFVSLLSE
CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHH
ISCVPAPAKIHRHRSQLQDALLDGHFHFAGKKIAIATEPDQLYQFATFFTGLGAEIISAV
HCCCCCHHHHHHHHHHHHHHHHCCCEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHH
TTTGESEIIEKVPAEKVQIGDLGDLEDLAGGADLLVTHSHGRQAAERLGIPLLRIGFPIF
HCCCHHHHHHHCCCCCEECCCCCCHHHHCCCCEEEEECCCHHHHHHHHCCCHHHHCCHHH
DRLGSQHKLTVLYRGTRDLIFEAANIIQANQPAPSLEQIDAMRKRRNAG
HHCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MVHIHRQSKSATVNPLKSSQPLGAALAFLGVDGAIPLFHGSQGCTSFALVLCVRHFKETI
CEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHHHHHC
PLQTTAMDELATVLGGAAHLEEAILNLKKRANPRLIGICTTALVETRSEDFARQIANIKM
CCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHCHH
THAEELAGTEVVLANTPDFDGALEEGWARAVAAMIQQITLRRQQAPRSRKATLIERITKP
HHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC
SEQPWKQQKVAILPGWHLTVGDIEQLREMVEGFGLRPVIVPDVSGSLDGTVPDRWMPTAY
CCCCHHHCCEEECCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCC
GGTSIEDIQELGRAVRCIAIGEHMRRPAELLQTLTGVPYVLVQSLTGLKNVDQFVSLLSE
CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHH
ISCVPAPAKIHRHRSQLQDALLDGHFHFAGKKIAIATEPDQLYQFATFFTGLGAEIISAV
HCCCCCHHHHHHHHHHHHHHHHCCCEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHH
TTTGESEIIEKVPAEKVQIGDLGDLEDLAGGADLLVTHSHGRQAAERLGIPLLRIGFPIF
HCCCHHHHHHHCCCCCEECCCCCCHHHHCCCCEEEEECCCHHHHHHHHCCCHHHHCCHHH
DRLGSQHKLTVLYRGTRDLIFEAANIIQANQPAPSLEQIDAMRKRRNAG
HHCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424