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The map label for this gene is y4uD

Identifier: 16519969

GI number: 16519969

Start: 166590

End: 167087

Strand: Reverse

Name: y4uD

Synonym: NGR_a01360

Alternate gene names: NA

Gene position: 167087-166590 (Counterclockwise)

Preceding gene: 16519968

Following gene: 16519971

Centisome position: 31.16

GC content: 61.04

Gene sequence:

>498_bases
ATGACCGGCGCCGAGTTTCGTCTCTGCGATGTCGCGCTCGACTGCTCGTTCAAAACCCGCGACCAGCGAGTTGAGCGCGA
ACAGGCACTCGCGGTCCTCGACCTCCTCGAGGCGAGTACCTTCGTGCCCGTCGGCCATCACGGCGGCCCGTATCGCCTCA
AGATCTCGATGGCCGCCGGCCGGCTGGTATTTCATATCGCCGACGATAAGGGAGCGCATATCGTCAGCCACCATCTTTCG
CTCGCCCCTTTCCGTCGGCTGCTTAATGACTACAGCCGCACTTGCGAAGGCTACTACGAGGCCATGTGCCGCTCCAACCT
CGAGCGGCTGCAGGCGATCGATATGGGCCGACGGGGCATTCACGATGAGGCTGCCGAGCTACTGAGGGAGCGTCTCTCTG
CTAAGGTCGACATCGACAAAGACACAGCGCGTCGGCTGTTCACGCTCATTTACGCGCTGCTCGCTCGCAACTCCGGCCAT
CAGATCCTTTTGAATTGA

Upstream 100 bases:

>100_bases
AGGCGCCGATCGGCCAGGAAGCGTCTTGCAACGTTCTGCATCGACGGCGGCAGGGCATTTGCCATGTGCGTGGAATCGTG
TGAAGGAAGGTGTAAGTGTC

Downstream 100 bases:

>100_bases
ATAGCCTGCGATCAACGCCCACAAGCGGGGGGGACTCCCCACCGTTTAACAAGCGGATTTTTGAGCGGCCAGAGAGGGGT
CGAAGGTGGTGCCAGTTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MTGAEFRLCDVALDCSFKTRDQRVEREQALAVLDLLEASTFVPVGHHGGPYRLKISMAAGRLVFHIADDKGAHIVSHHLS
LAPFRRLLNDYSRTCEGYYEAMCRSNLERLQAIDMGRRGIHDEAAELLRERLSAKVDIDKDTARRLFTLIYALLARNSGH
QILLN

Sequences:

>Translated_165_residues
MTGAEFRLCDVALDCSFKTRDQRVEREQALAVLDLLEASTFVPVGHHGGPYRLKISMAAGRLVFHIADDKGAHIVSHHLS
LAPFRRLLNDYSRTCEGYYEAMCRSNLERLQAIDMGRRGIHDEAAELLRERLSAKVDIDKDTARRLFTLIYALLARNSGH
QILLN
>Mature_164_residues
TGAEFRLCDVALDCSFKTRDQRVEREQALAVLDLLEASTFVPVGHHGGPYRLKISMAAGRLVFHIADDKGAHIVSHHLSL
APFRRLLNDYSRTCEGYYEAMCRSNLERLQAIDMGRRGIHDEAAELLRERLSAKVDIDKDTARRLFTLIYALLARNSGHQ
ILLN

Specific function: Unknown

COG id: COG5328

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0262 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4UD_RHISN (P55670)

Other databases:

- EMBL:   Z68203
- EMBL:   U00090
- RefSeq:   NP_444089.1
- GeneID:   962160
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a01360
- HOGENOM:   HBG294171
- ProtClustDB:   PRK02853
- HAMAP:   MF_00678
- InterPro:   IPR008321
- PIRSF:   PIRSF032146

Pfam domain/function: PF06793 UPF0262

EC number: NA

Molecular weight: Translated: 18678; Mature: 18547

Theoretical pI: Translated: 8.01; Mature: 8.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGAEFRLCDVALDCSFKTRDQRVEREQALAVLDLLEASTFVPVGHHGGPYRLKISMAAG
CCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCEEEEEEEECC
RLVFHIADDKGAHIVSHHLSLAPFRRLLNDYSRTCEGYYEAMCRSNLERLQAIDMGRRGI
EEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
HDEAAELLRERLSAKVDIDKDTARRLFTLIYALLARNSGHQILLN
CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEC
>Mature Secondary Structure 
TGAEFRLCDVALDCSFKTRDQRVEREQALAVLDLLEASTFVPVGHHGGPYRLKISMAAG
CCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCEEEEEEEECC
RLVFHIADDKGAHIVSHHLSLAPFRRLLNDYSRTCEGYYEAMCRSNLERLQAIDMGRRGI
EEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
HDEAAELLRERLSAKVDIDKDTARRLFTLIYALLARNSGHQILLN
CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8796346; 9163424