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Identifier: 16519940

GI number: 16519940

Start: 205207

End: 206592

Strand: Reverse

Name: Not Available

Synonym: NGR_a01650

Alternate gene names: NA

Gene position: 206592-205207 (Counterclockwise)

Preceding gene: 16519939

Following gene: 16519941

Centisome position: 38.53

GC content: 56.64

Gene sequence:

>1386_bases
ATGGAGAAGTGCTCACACGAGAGCGGTCGTCATTCGGCGGAGAATGACGGCAAATACGATATCACTGGTTCGACGGCGAC
GAACGTCGTGGACGGTTTCACAATGGTGGCAGTTGGCGACGTTATCGTGTCGCGAACCCTGGCGAACGGGCACCATCCGG
GCTTTAGTGAGATCGTCGAGCTCCTGCGAGCCGCAGACGTAACTTTCGGCAACATGGAGACGCTGATCTTCGACATCAGA
TCATTCAATGGAACACCGCAGGCTGAGTACGGGGGGGCGTATCACGTCAGCCTTCCCGAGATTGGACCTGATCTGAAGGC
GATGGGGTTCAATATTATGGGCCGCGCAAACAACCATTCCTTGGACTGGGGCGTCGAAGGCATGCGTGAGACGAGCCGGA
TCCTCGATGAGAGCGGCATCATCCACGCCGGTGTGGGTGAAAGTCGCGCACAAGCCAGCGCTGCACGTCTTTTAGAAACG
GCCCGCGGTCGCGTCGCTTTGCTCTCATGCGCCACCTCATTCACGCCGATGTCGCGTGCATGCGATCCAGCGGGCGAGGC
ACCAGCCAGGCCTGGAGTCAATGCGCTCCGTCTAGAGAGAAGCGTCGTCGTCGAGCCCGACATGCTTGAGAGCCTAAGAA
AGATACGTGATGCCTTGCCCAATCCTGGGCCTAAACACGATGATCGCGAAATGTTGGTGCTCGCAGGAACGACCTATAGA
ACCGGCAAAGACGTCGGCTACACCTATGCGGCTAATACGCGAGATCTGGCCGATATTTTAAGAAACGTTCGGCGCGGCAA
GCAATATTCCGATTTCTGCATTTTTACAAACCACGCACACGAGCCGGGAAATTGGAGCGAAGAGCCGGCCGATTTTGAGC
AGGCGCTTGCTCGCAAGCTAATCGATGCGGGAGCGGACGCGTACGTTGGACACGGACCGCACCGACTGCGTGGCATCGAA
ATCTACAAACGCCGGCCCATCTTCTATAGTCTGGGGAACTTCTTTTATGATGACCTCCGGACACCCGTTGGGGCGGACAT
GTACGATGTGTACGACAAGGACCCACAGGTGGACACCGATGCCGAAGTAACCGCAGCGGAAGAAACAATGGGTTACCCTA
CGGCTGCAGGGTTCATAGGCGCGCTCGCCGAACCGGTGTATTACGAGAGCGTCGTCGCAGTTAGCCGCTTTGAGGAGAAC
CAACTGGCCGAACTGCGGCTTTATCCAATCGAGCTCGGTTATTCCAAAAGGCTTGCGAACAGGGGCGTCCCTAGTCTTGC
TCCACGCCCTCAGGCAATCTCGATTCTTGAACGCCTGCAGAGGTTGTCAGAGCCGTTTGGAACGAGAATCACCATCGAGG
ACCGTGTCGGTCTTATTAGACTGTAA

Upstream 100 bases:

>100_bases
CTCTCGCGTCTCTTGCACTGCCAAAAACCGTTCAGCCCGGCGGAACAATTCTCGCCCGTCGTTGAATCAAAAAGCTAGCC
CAGAACACCAAGGAAGAAAT

Downstream 100 bases:

>100_bases
CCACGCATCGTCACGAACCTCCCAAGCTGCGATTTCTCGCCCGTATGGGGTCGCTCTTATCGGCTGAGCAGGGAACTGAT
AACAGATGGCTCAAGGAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 461; Mature: 461

Protein sequence:

>461_residues
MEKCSHESGRHSAENDGKYDITGSTATNVVDGFTMVAVGDVIVSRTLANGHHPGFSEIVELLRAADVTFGNMETLIFDIR
SFNGTPQAEYGGAYHVSLPEIGPDLKAMGFNIMGRANNHSLDWGVEGMRETSRILDESGIIHAGVGESRAQASAARLLET
ARGRVALLSCATSFTPMSRACDPAGEAPARPGVNALRLERSVVVEPDMLESLRKIRDALPNPGPKHDDREMLVLAGTTYR
TGKDVGYTYAANTRDLADILRNVRRGKQYSDFCIFTNHAHEPGNWSEEPADFEQALARKLIDAGADAYVGHGPHRLRGIE
IYKRRPIFYSLGNFFYDDLRTPVGADMYDVYDKDPQVDTDAEVTAAEETMGYPTAAGFIGALAEPVYYESVVAVSRFEEN
QLAELRLYPIELGYSKRLANRGVPSLAPRPQAISILERLQRLSEPFGTRITIEDRVGLIRL

Sequences:

>Translated_461_residues
MEKCSHESGRHSAENDGKYDITGSTATNVVDGFTMVAVGDVIVSRTLANGHHPGFSEIVELLRAADVTFGNMETLIFDIR
SFNGTPQAEYGGAYHVSLPEIGPDLKAMGFNIMGRANNHSLDWGVEGMRETSRILDESGIIHAGVGESRAQASAARLLET
ARGRVALLSCATSFTPMSRACDPAGEAPARPGVNALRLERSVVVEPDMLESLRKIRDALPNPGPKHDDREMLVLAGTTYR
TGKDVGYTYAANTRDLADILRNVRRGKQYSDFCIFTNHAHEPGNWSEEPADFEQALARKLIDAGADAYVGHGPHRLRGIE
IYKRRPIFYSLGNFFYDDLRTPVGADMYDVYDKDPQVDTDAEVTAAEETMGYPTAAGFIGALAEPVYYESVVAVSRFEEN
QLAELRLYPIELGYSKRLANRGVPSLAPRPQAISILERLQRLSEPFGTRITIEDRVGLIRL
>Mature_461_residues
MEKCSHESGRHSAENDGKYDITGSTATNVVDGFTMVAVGDVIVSRTLANGHHPGFSEIVELLRAADVTFGNMETLIFDIR
SFNGTPQAEYGGAYHVSLPEIGPDLKAMGFNIMGRANNHSLDWGVEGMRETSRILDESGIIHAGVGESRAQASAARLLET
ARGRVALLSCATSFTPMSRACDPAGEAPARPGVNALRLERSVVVEPDMLESLRKIRDALPNPGPKHDDREMLVLAGTTYR
TGKDVGYTYAANTRDLADILRNVRRGKQYSDFCIFTNHAHEPGNWSEEPADFEQALARKLIDAGADAYVGHGPHRLRGIE
IYKRRPIFYSLGNFFYDDLRTPVGADMYDVYDKDPQVDTDAEVTAAEETMGYPTAAGFIGALAEPVYYESVVAVSRFEEN
QLAELRLYPIELGYSKRLANRGVPSLAPRPQAISILERLQRLSEPFGTRITIEDRVGLIRL

Specific function: Could be involved in the biosynthesis of a cell wall component

COG id: COG2843

COG function: function code M; Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CapA family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4SH_RHISN (P55651)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_444060.1
- ProteinModelPortal:   P55651
- GeneID:   962218
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a01650
- HOGENOM:   HBG641558
- ProtClustDB:   CLSK893869
- InterPro:   IPR019079
- SMART:   SM00854

Pfam domain/function: PF09587 PGA_cap

EC number: NA

Molecular weight: Translated: 50670; Mature: 50670

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKCSHESGRHSAENDGKYDITGSTATNVVDGFTMVAVGDVIVSRTLANGHHPGFSEIVE
CCCCCCCCCCCCCCCCCCEEECCCHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHHHH
LLRAADVTFGNMETLIFDIRSFNGTPQAEYGGAYHVSLPEIGPDLKAMGFNIMGRANNHS
HHHHHCCCCCCHHEEEEEHHHCCCCCCCCCCCEEEEECCCCCCCHHHHCEEEEECCCCCC
LDWGVEGMRETSRILDESGIIHAGVGESRAQASAARLLETARGRVALLSCATSFTPMSRA
CCCCHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHCCCEEEEEHHHCCCCHHHC
CDPAGEAPARPGVNALRLERSVVVEPDMLESLRKIRDALPNPGPKHDDREMLVLAGTTYR
CCCCCCCCCCCCCHHHEECCCEEECCHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCC
TGKDVGYTYAANTRDLADILRNVRRGKQYSDFCIFTNHAHEPGNWSEEPADFEQALARKL
CCCCCCEEEECCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHH
IDAGADAYVGHGPHRLRGIEIYKRRPIFYSLGNFFYDDLRTPVGADMYDVYDKDPQVDTD
HHCCCCCCCCCCCHHCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCC
AEVTAAEETMGYPTAAGFIGALAEPVYYESVVAVSRFEENQLAELRLYPIELGYSKRLAN
CCCEEHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCCEEEEEEEEEECCHHHHHHH
RGVPSLAPRPQAISILERLQRLSEPFGTRITIEDRVGLIRL
CCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCEECC
>Mature Secondary Structure
MEKCSHESGRHSAENDGKYDITGSTATNVVDGFTMVAVGDVIVSRTLANGHHPGFSEIVE
CCCCCCCCCCCCCCCCCCEEECCCHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHHHH
LLRAADVTFGNMETLIFDIRSFNGTPQAEYGGAYHVSLPEIGPDLKAMGFNIMGRANNHS
HHHHHCCCCCCHHEEEEEHHHCCCCCCCCCCCEEEEECCCCCCCHHHHCEEEEECCCCCC
LDWGVEGMRETSRILDESGIIHAGVGESRAQASAARLLETARGRVALLSCATSFTPMSRA
CCCCHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHCCCEEEEEHHHCCCCHHHC
CDPAGEAPARPGVNALRLERSVVVEPDMLESLRKIRDALPNPGPKHDDREMLVLAGTTYR
CCCCCCCCCCCCCHHHEECCCEEECCHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCC
TGKDVGYTYAANTRDLADILRNVRRGKQYSDFCIFTNHAHEPGNWSEEPADFEQALARKL
CCCCCCEEEECCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHH
IDAGADAYVGHGPHRLRGIEIYKRRPIFYSLGNFFYDDLRTPVGADMYDVYDKDPQVDTD
HHCCCCCCCCCCCHHCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCC
AEVTAAEETMGYPTAAGFIGALAEPVYYESVVAVSRFEENQLAELRLYPIELGYSKRLAN
CCCEEHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCCEEEEEEEEEECCHHHHHHH
RGVPSLAPRPQAISILERLQRLSEPFGTRITIEDRVGLIRL
CCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424