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Identifier: 16519900

GI number: 16519900

Start: 212797

End: 213375

Strand: Direct

Name: Not Available

Synonym: NGR_a01690

Alternate gene names: NA

Gene position: 212797-213375 (Clockwise)

Preceding gene: 16519937

Following gene: 16519935

Centisome position: 39.69

GC content: 63.21

Gene sequence:

>579_bases
ATGGGTTCGGCGGTTTTGTTGCGTGATGATTTCGACGGAGCTGCTCTTCGACAGCTCGCACGGCAGACGAAGGATGCCAA
TCAGGCCCGGCGGTTGCTGGCTCTTGCCGCGATCTATGACGGCGGCCCGCGCTCGGATGCGGCACGGATCGGCAGCGTGA
CGCTGCAGATTGTGCGGGATTGGGTCCTGCGTTTCAACGCGCGCGGCCCCGATGGACTGGTGAATGGCAAAGCGCCTGGC
GGCCGAGCGAAGTTGAATGCCGCTCAGCGCCAGGCTCTTGCAAAGGTCGTCGAGAGCGGCCCGATCCCGGCGATCCACGG
TGTTGTCCGTTGGCGGCGCAAGGACCTGGTTCAGTGGATATTCCAGGAATTCCGCATCTCGATGGACGAGACGACGGTCG
GCCGCGAGTTGAAGGCGCTCGGCTTTGCCAAGCTGTCGGCTCGCCCACGCCACTACGCTCAGAACGAGCTGGAAGTAGAC
GCTTTTAAAAAGACTTCCCCGCCGCTCTGGCGGAAATCCGAAGCCGGCTCCCGCAAGGCACGGACATCGAACTCTGGTGG
GCCGACGAAGCGCGCATAG

Upstream 100 bases:

>100_bases
GGATCAACATGCCGTAATACCAACGAGCGCCGTTTCTGACTCTCATGGGATTCCCAAGGTGTCGCGAATCTGAATCCATG
CTGCAAACAGGAGGTTTGCG

Downstream 100 bases:

>100_bases
GCCAGAAGAACAAGATCACGCGCCGATGGGCGCGTCGTGGCACCAGACCATCCGCGCCCTTGGATCAGCGCACCATGTTG
AGGTGGACGGCTCCCAACGG

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 191

Protein sequence:

>192_residues
MGSAVLLRDDFDGAALRQLARQTKDANQARRLLALAAIYDGGPRSDAARIGSVTLQIVRDWVLRFNARGPDGLVNGKAPG
GRAKLNAAQRQALAKVVESGPIPAIHGVVRWRRKDLVQWIFQEFRISMDETTVGRELKALGFAKLSARPRHYAQNELEVD
AFKKTSPPLWRKSEAGSRKARTSNSGGPTKRA

Sequences:

>Translated_192_residues
MGSAVLLRDDFDGAALRQLARQTKDANQARRLLALAAIYDGGPRSDAARIGSVTLQIVRDWVLRFNARGPDGLVNGKAPG
GRAKLNAAQRQALAKVVESGPIPAIHGVVRWRRKDLVQWIFQEFRISMDETTVGRELKALGFAKLSARPRHYAQNELEVD
AFKKTSPPLWRKSEAGSRKARTSNSGGPTKRA
>Mature_191_residues
GSAVLLRDDFDGAALRQLARQTKDANQARRLLALAAIYDGGPRSDAARIGSVTLQIVRDWVLRFNARGPDGLVNGKAPGG
RAKLNAAQRQALAKVVESGPIPAIHGVVRWRRKDLVQWIFQEFRISMDETTVGRELKALGFAKLSARPRHYAQNELEVDA
FKKTSPPLWRKSEAGSRKARTSNSGGPTKRA

Specific function: Unknown

COG id: COG3335

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To A.xylinum IS1268 ORFA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4PG_RHISN (P55616)

Other databases:

- EMBL:   U00090
- EMBL:   U00090
- RefSeq:   NP_444020.1
- RefSeq:   NP_444056.1
- GeneID:   962396
- GeneID:   962431
- GenomeReviews:   U00090_GR
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a01690
- KEGG:   rhi:NGR_a02050
- HOGENOM:   HBG493329
- ProtClustDB:   CLSK893866
- InterPro:   IPR009057

Pfam domain/function: SSF46689 Homeodomain_like

EC number: NA

Molecular weight: Translated: 21094; Mature: 20963

Theoretical pI: Translated: 11.73; Mature: 11.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSAVLLRDDFDGAALRQLARQTKDANQARRLLALAAIYDGGPRSDAARIGSVTLQIVRD
CCCEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
WVLRFNARGPDGLVNGKAPGGRAKLNAAQRQALAKVVESGPIPAIHGVVRWRRKDLVQWI
HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
FQEFRISMDETTVGRELKALGFAKLSARPRHYAQNELEVDAFKKTSPPLWRKSEAGSRKA
HHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHCCCCCCCCCCCCCCCCC
RTSNSGGPTKRA
CCCCCCCCCCCC
>Mature Secondary Structure 
GSAVLLRDDFDGAALRQLARQTKDANQARRLLALAAIYDGGPRSDAARIGSVTLQIVRD
CCEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
WVLRFNARGPDGLVNGKAPGGRAKLNAAQRQALAKVVESGPIPAIHGVVRWRRKDLVQWI
HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
FQEFRISMDETTVGRELKALGFAKLSARPRHYAQNELEVDAFKKTSPPLWRKSEAGSRKA
HHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHCCCCCCCCCCCCCCCCC
RTSNSGGPTKRA
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424