Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 16519935

GI number: 16519935

Start: 213401

End: 214564

Strand: Direct

Name: Not Available

Synonym: NGR_a01700

Alternate gene names: NA

Gene position: 213401-214564 (Clockwise)

Preceding gene: 16519900

Following gene: 16519934

Centisome position: 39.8

GC content: 56.36

Gene sequence:

>1164_bases
ATGGGCGCGTCGTGGCACCAGACCATCCGCGCCCTTGGATCAGCGCACCATGTTGAGGTGGACGGCTCCCAACGGCATCG
AATGTGCCAGAATGAGTTCGTTGAAGTTCTCAATCGAGGGAAACCGTCCGTGGAACAGATTATCCGAATTGGTATGGATA
CGTCAAAGAGCGTCTTCCAATTGCATGGTGTGAATGCGGTTGAGCAGCCAATCCTTCGTAAGAAGCTGTCGCGCCGGGAA
ATGGTGAAGTTCTTCGAGAAAACACCGCCGACCATTATCGCACTTGAAGCGTGCGGTGGGTCACATCACTGGGCACGGCT
GTTAAGTTCGTTCGGCCATGAAGTAAAGTTGATAGCACCGCAACTGGCCAAGCCGTATGTGAAACGGGGCAAGAACGATG
CCGCGGATGCGGAAGCATTGTGTGAGGCAATGAGCCGCCCGACCATGCGCTTCGTGCCAATGAAAACGGCTGATCAGCAG
GCGGCGTTAATGCTGGTCGGTATGCGAGAGAGACTCATCCGCAATCGGACACAGCTCGCCAATGCCATTCGCGGTTTTGC
CATGGAATTTGGCATCGTTGCGGCCAAAGGCATGTGCCGCATCGAAGCGCTATTGGAGCGCATTGCCGCTGACCCGTCCC
TACCGGAACTGGCGCAGGATCTCTTCGCGCTGCATGGACAGGAATACCGCGAGCTAGCTTGCCAGATCAAAACGCTCGAT
GAAAAGTTGATGAAGTTGCATCGTGCTGATGAATGCAGCAAACGCCTGGCCGAGATCCCGGGTGTCGGCCCGATAGGCGC
CTCCCTTCTCTTGATGAAGACACCGGATCCTCGAATGTTTAAATCGGGCCGCGACTTTGCAGCATGGATCGGTCTGACGC
CGAAGGACCATTCAACTGCCGGAAAGGTCAGGCTTGGTGTCATTACCCGGGCTGGCGACGAAATGTTGCGGAGCATCTTG
GTGGTTGGCGCGACATCTCTTCTACAGCAAGTCAGAACAGGCCGCAGCAGGCACGCCTCTGCATGGCTTATGGGGCTGCT
GCAGCGGAAAAGGCCAAAGTTGGTTGCCGTAGCGCTCGCCAACAAGCTGGCGCGGATTGCGTGGAAGCTTATGACGAGCG
GCGAGTCATATCGCCAGGCAGAAGGCCAAGCGCAGACATCATAA

Upstream 100 bases:

>100_bases
CTCTGGCGGAAATCCGAAGCCGGCTCCCGCAAGGCACGGACATCGAACTCTGGTGGGCCGACGAAGCGCGCATAGGCCAG
AAGAACAAGATCACGCGCCG

Downstream 100 bases:

>100_bases
AAGTTCAGCCACCACGGTGAGCAAAGACAAAATGCTACCGTGTGAGCTGATGCTGTGAACTTGCAAGCGAAGAGCAGATG
ATGCGATCGGACGATCCAAG

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 387; Mature: 386

Protein sequence:

>387_residues
MGASWHQTIRALGSAHHVEVDGSQRHRMCQNEFVEVLNRGKPSVEQIIRIGMDTSKSVFQLHGVNAVEQPILRKKLSRRE
MVKFFEKTPPTIIALEACGGSHHWARLLSSFGHEVKLIAPQLAKPYVKRGKNDAADAEALCEAMSRPTMRFVPMKTADQQ
AALMLVGMRERLIRNRTQLANAIRGFAMEFGIVAAKGMCRIEALLERIAADPSLPELAQDLFALHGQEYRELACQIKTLD
EKLMKLHRADECSKRLAEIPGVGPIGASLLLMKTPDPRMFKSGRDFAAWIGLTPKDHSTAGKVRLGVITRAGDEMLRSIL
VVGATSLLQQVRTGRSRHASAWLMGLLQRKRPKLVAVALANKLARIAWKLMTSGESYRQAEGQAQTS

Sequences:

>Translated_387_residues
MGASWHQTIRALGSAHHVEVDGSQRHRMCQNEFVEVLNRGKPSVEQIIRIGMDTSKSVFQLHGVNAVEQPILRKKLSRRE
MVKFFEKTPPTIIALEACGGSHHWARLLSSFGHEVKLIAPQLAKPYVKRGKNDAADAEALCEAMSRPTMRFVPMKTADQQ
AALMLVGMRERLIRNRTQLANAIRGFAMEFGIVAAKGMCRIEALLERIAADPSLPELAQDLFALHGQEYRELACQIKTLD
EKLMKLHRADECSKRLAEIPGVGPIGASLLLMKTPDPRMFKSGRDFAAWIGLTPKDHSTAGKVRLGVITRAGDEMLRSIL
VVGATSLLQQVRTGRSRHASAWLMGLLQRKRPKLVAVALANKLARIAWKLMTSGESYRQAEGQAQTS
>Mature_386_residues
GASWHQTIRALGSAHHVEVDGSQRHRMCQNEFVEVLNRGKPSVEQIIRIGMDTSKSVFQLHGVNAVEQPILRKKLSRREM
VKFFEKTPPTIIALEACGGSHHWARLLSSFGHEVKLIAPQLAKPYVKRGKNDAADAEALCEAMSRPTMRFVPMKTADQQA
ALMLVGMRERLIRNRTQLANAIRGFAMEFGIVAAKGMCRIEALLERIAADPSLPELAQDLFALHGQEYRELACQIKTLDE
KLMKLHRADECSKRLAEIPGVGPIGASLLLMKTPDPRMFKSGRDFAAWIGLTPKDHSTAGKVRLGVITRAGDEMLRSILV
VGATSLLQQVRTGRSRHASAWLMGLLQRKRPKLVAVALANKLARIAWKLMTSGESYRQAEGQAQTS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 20 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4PF_RHISN (P55615)

Other databases:

- EMBL:   U00090
- EMBL:   U00090
- RefSeq:   NP_444019.1
- RefSeq:   NP_444055.1
- GeneID:   962212
- GeneID:   962427
- GenomeReviews:   U00090_GR
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a01700
- KEGG:   rhi:NGR_a02060
- HOGENOM:   HBG469448
- ProtClustDB:   CLSK543927
- InterPro:   IPR003346
- InterPro:   IPR002525

Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9

EC number: NA

Molecular weight: Translated: 42935; Mature: 42804

Theoretical pI: Translated: 10.73; Mature: 10.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGASWHQTIRALGSAHHVEVDGSQRHRMCQNEFVEVLNRGKPSVEQIIRIGMDTSKSVFQ
CCCHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHH
LHGVNAVEQPILRKKLSRREMVKFFEKTPPTIIALEACGGSHHWARLLSSFGHEVKLIAP
HCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEECH
QLAKPYVKRGKNDAADAEALCEAMSRPTMRFVPMKTADQQAALMLVGMRERLIRNRTQLA
HHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
NAIRGFAMEFGIVAAKGMCRIEALLERIAADPSLPELAQDLFALHGQEYRELACQIKTLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHH
EKLMKLHRADECSKRLAEIPGVGPIGASLLLMKTPDPRMFKSGRDFAAWIGLTPKDHSTA
HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHCCCCCEEEECCCCCCCCCC
GKVRLGVITRAGDEMLRSILVVGATSLLQQVRTGRSRHASAWLMGLLQRKRPKLVAVALA
CCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHH
NKLARIAWKLMTSGESYRQAEGQAQTS
HHHHHHHHHHHHCCCHHHHHCCCCCCC
>Mature Secondary Structure 
GASWHQTIRALGSAHHVEVDGSQRHRMCQNEFVEVLNRGKPSVEQIIRIGMDTSKSVFQ
CCHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHH
LHGVNAVEQPILRKKLSRREMVKFFEKTPPTIIALEACGGSHHWARLLSSFGHEVKLIAP
HCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEECH
QLAKPYVKRGKNDAADAEALCEAMSRPTMRFVPMKTADQQAALMLVGMRERLIRNRTQLA
HHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
NAIRGFAMEFGIVAAKGMCRIEALLERIAADPSLPELAQDLFALHGQEYRELACQIKTLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHH
EKLMKLHRADECSKRLAEIPGVGPIGASLLLMKTPDPRMFKSGRDFAAWIGLTPKDHSTA
HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHCCCCCEEEECCCCCCCCCC
GKVRLGVITRAGDEMLRSILVVGATSLLQQVRTGRSRHASAWLMGLLQRKRPKLVAVALA
CCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHH
NKLARIAWKLMTSGESYRQAEGQAQTS
HHHHHHHHHHHHCCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424