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Identifier: 16519885

GI number: 16519885

Start: 286941

End: 288236

Strand: Reverse

Name: Not Available

Synonym: NGR_a02200

Alternate gene names: 16519885

Gene position: 288236-286941 (Counterclockwise)

Preceding gene: 16519879

Following gene: 16519886

Centisome position: 53.76

GC content: 60.34

Gene sequence:

>1296_bases
ATGAAACGTCGTACATTCACCGCTGGGCTGGCGGCTTTGCCGTTCCTCGGCTCCAGCCTCACCCGCGCATTCGCGCAAGA
TGCTGCCGCCTCGCTCCCGAAAACCTATTCGGGGCAGAAGATCCGAGCGCTGGCCTCGACCGGTGCTGCCTTCGAAGCGA
TGGCTACGGTCAGCCGAGACTTCACCGAGGCGACCGGCATCGCCGTCGAATACGTCAACCTGTCCTATAACGAGCAGTAC
CAGAAGCTGATCCTCGATCTAACCAGCGGTGCGGCGTCTTTCGACGTCTTCAACTTCGCCTATCAGTGGAAATTCGAGAT
CGAGCCGTATTGCGCCGATCTTGCGAATATTCCGAAGGAAATTCAGGGTGCGCCAGATCTCGCGCTTGACGACTATCCGC
AACGAGCACTCGAAATCTACGGCCGTGCCAACAACAAGCTCATCGGTCTGCCGACACTCGGCGATGTGACGCTGTTCGTC
TGGAACAAGGAGGCCTACAAGGCCGCGGGGTTGGATCCTGACGCCGCACCGAAGACCTGGGACGAAGTCGTCGAGCGCGG
CGCCAAGCTCGTCAGCAACGGCCAATTCGGCTACGCCATGCCGGCGGGCAAGGGCATTCAAACGACCGTGACCTGGATCA
TGGTGTTCAAGTCGATGGGCGGCGAATATTTCGATGCGTCCGGCGCCCCGACCTTTGCCAGCGAAGCCGGCGTCAAGACG
ATGAAATTCCTGGTCGAGAAGCTGGCGGCGGTCAGCCCTCCCGGCAATCTTGCCTGGGATTTCCCGGAGATGTTCAACAG
CCTGTCGACCGGTCAGTCGGGGCAGTCGATGATGTGGCCCGGAGCTTTCGGCGATCTGCTCAACCCGAAGAGGTCCCAGG
TCCACGACAAAATCGGGTGGTCGCCGATGCCGCAAGCTTCACTGTTGGGTGGCTGGTCGATGGGCGTCAACGATGCCTCT
CGGTCAAAGGATGCCGCCAAGCTTTACGTGGCATGGCTCACATCTCCCGACATCGTTCGCCGCATGGGTCTTATTGGCGG
GGCTCCGGCACGCATCTCGGCGCTAAAGGATCCGGAGTTGATCAAGCAGGCTCCGAACCGACCGGCTGTGCTTGCCGGTC
TGCAGGGCGACGTCGCCGAATATCCGCCGATCAAGGAAGCGGAGCAGGTCCACATCATGATCTATGATGAGGTGAATGCG
GCGGTGGCGAAGATCAAGACGCCGGAACAGGCGGCCAGCGATCTTCAGGGCAAGGTTGAGTCTTTCATGCGGCGCCGCGG
CTATCTCAAAACCTGA

Upstream 100 bases:

>100_bases
TCGGCGTTGAATGCGTCATGGGGGTGCCGTAAGCCATCATACATGGAGCGAGAGGAGAAGGCGGTCGAGGGGGCCGCAGA
TGCTTCAGCAAGGAGGAGAT

Downstream 100 bases:

>100_bases
GGTCGCGCTCCGTGGGGGGCAGGCGTTCCTCCCCGTCTGCCCCCCCTTTACAACGGCAAATCTGCAAGTAGTTTACCTGA
TGACAATCTCTCAAACAGTT

Product: ABC transporter substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 431; Mature: 431

Protein sequence:

>431_residues
MKRRTFTAGLAALPFLGSSLTRAFAQDAAASLPKTYSGQKIRALASTGAAFEAMATVSRDFTEATGIAVEYVNLSYNEQY
QKLILDLTSGAASFDVFNFAYQWKFEIEPYCADLANIPKEIQGAPDLALDDYPQRALEIYGRANNKLIGLPTLGDVTLFV
WNKEAYKAAGLDPDAAPKTWDEVVERGAKLVSNGQFGYAMPAGKGIQTTVTWIMVFKSMGGEYFDASGAPTFASEAGVKT
MKFLVEKLAAVSPPGNLAWDFPEMFNSLSTGQSGQSMMWPGAFGDLLNPKRSQVHDKIGWSPMPQASLLGGWSMGVNDAS
RSKDAAKLYVAWLTSPDIVRRMGLIGGAPARISALKDPELIKQAPNRPAVLAGLQGDVAEYPPIKEAEQVHIMIYDEVNA
AVAKIKTPEQAASDLQGKVESFMRRRGYLKT

Sequences:

>Translated_431_residues
MKRRTFTAGLAALPFLGSSLTRAFAQDAAASLPKTYSGQKIRALASTGAAFEAMATVSRDFTEATGIAVEYVNLSYNEQY
QKLILDLTSGAASFDVFNFAYQWKFEIEPYCADLANIPKEIQGAPDLALDDYPQRALEIYGRANNKLIGLPTLGDVTLFV
WNKEAYKAAGLDPDAAPKTWDEVVERGAKLVSNGQFGYAMPAGKGIQTTVTWIMVFKSMGGEYFDASGAPTFASEAGVKT
MKFLVEKLAAVSPPGNLAWDFPEMFNSLSTGQSGQSMMWPGAFGDLLNPKRSQVHDKIGWSPMPQASLLGGWSMGVNDAS
RSKDAAKLYVAWLTSPDIVRRMGLIGGAPARISALKDPELIKQAPNRPAVLAGLQGDVAEYPPIKEAEQVHIMIYDEVNA
AVAKIKTPEQAASDLQGKVESFMRRRGYLKT
>Mature_431_residues
MKRRTFTAGLAALPFLGSSLTRAFAQDAAASLPKTYSGQKIRALASTGAAFEAMATVSRDFTEATGIAVEYVNLSYNEQY
QKLILDLTSGAASFDVFNFAYQWKFEIEPYCADLANIPKEIQGAPDLALDDYPQRALEIYGRANNKLIGLPTLGDVTLFV
WNKEAYKAAGLDPDAAPKTWDEVVERGAKLVSNGQFGYAMPAGKGIQTTVTWIMVFKSMGGEYFDASGAPTFASEAGVKT
MKFLVEKLAAVSPPGNLAWDFPEMFNSLSTGQSGQSMMWPGAFGDLLNPKRSQVHDKIGWSPMPQASLLGGWSMGVNDAS
RSKDAAKLYVAWLTSPDIVRRMGLIGGAPARISALKDPELIKQAPNRPAVLAGLQGDVAEYPPIKEAEQVHIMIYDEVNA
AVAKIKTPEQAASDLQGKVESFMRRRGYLKT

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4OP_RHISN (P55601)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_444005.1
- ProteinModelPortal:   P55601
- GeneID:   962387
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a02200
- InterPro:   IPR006059

Pfam domain/function: PF01547 SBP_bac_1

EC number: NA

Molecular weight: Translated: 46710; Mature: 46710

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: PS01037 SBP_BACTERIAL_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRRTFTAGLAALPFLGSSLTRAFAQDAAASLPKTYSGQKIRALASTGAAFEAMATVSRD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHH
FTEATGIAVEYVNLSYNEQYQKLILDLTSGAASFDVFNFAYQWKFEIEPYCADLANIPKE
HHHHCCEEEEEEECCCCHHHHHHHHHHHCCCCHHHEEEEEEEEEEECCHHHHHHHCCCHH
IQGAPDLALDDYPQRALEIYGRANNKLIGLPTLGDVTLFVWNKEAYKAAGLDPDAAPKTW
HCCCCCCCCCCCHHHHHHHHCCCCCCEEECCCCCCEEEEEECCHHHHHCCCCCCCCCCHH
DEVVERGAKLVSNGQFGYAMPAGKGIQTTVTWIMVFKSMGGEYFDASGAPTFASEAGVKT
HHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHHHCCCEECCCCCCCCHHHCCHHH
MKFLVEKLAAVSPPGNLAWDFPEMFNSLSTGQSGQSMMWPGAFGDLLNPKRSQVHDKIGW
HHHHHHHHHHCCCCCCCEECHHHHHHHHCCCCCCCCEECCCCHHHHCCCHHHHHHHHCCC
SPMPQASLLGGWSMGVNDASRSKDAAKLYVAWLTSPDIVRRMGLIGGAPARISALKDPEL
CCCCCHHHCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHCCCCCHHHHCCCCHHH
IKQAPNRPAVLAGLQGDVAEYPPIKEAEQVHIMIYDEVNAAVAKIKTPEQAASDLQGKVE
HHHCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHCCCHHHHHHHHHHHHH
SFMRRRGYLKT
HHHHHCCCCCC
>Mature Secondary Structure
MKRRTFTAGLAALPFLGSSLTRAFAQDAAASLPKTYSGQKIRALASTGAAFEAMATVSRD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHH
FTEATGIAVEYVNLSYNEQYQKLILDLTSGAASFDVFNFAYQWKFEIEPYCADLANIPKE
HHHHCCEEEEEEECCCCHHHHHHHHHHHCCCCHHHEEEEEEEEEEECCHHHHHHHCCCHH
IQGAPDLALDDYPQRALEIYGRANNKLIGLPTLGDVTLFVWNKEAYKAAGLDPDAAPKTW
HCCCCCCCCCCCHHHHHHHHCCCCCCEEECCCCCCEEEEEECCHHHHHCCCCCCCCCCHH
DEVVERGAKLVSNGQFGYAMPAGKGIQTTVTWIMVFKSMGGEYFDASGAPTFASEAGVKT
HHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHHHCCCEECCCCCCCCHHHCCHHH
MKFLVEKLAAVSPPGNLAWDFPEMFNSLSTGQSGQSMMWPGAFGDLLNPKRSQVHDKIGW
HHHHHHHHHHCCCCCCCEECHHHHHHHHCCCCCCCCEECCCCHHHHCCCHHHHHHHHCCC
SPMPQASLLGGWSMGVNDASRSKDAAKLYVAWLTSPDIVRRMGLIGGAPARISALKDPEL
CCCCCHHHCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHCCCCCHHHHCCCCHHH
IKQAPNRPAVLAGLQGDVAEYPPIKEAEQVHIMIYDEVNAAVAKIKTPEQAASDLQGKVE
HHHCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHCCCHHHHHHHHHHHHH
SFMRRRGYLKT
HHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424