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Identifier: 16519886

GI number: 16519886

Start: 285932

End: 286861

Strand: Reverse

Name: Not Available

Synonym: NGR_a02190

Alternate gene names: 16519886

Gene position: 286861-285932 (Counterclockwise)

Preceding gene: 16519885

Following gene: 16519887

Centisome position: 53.5

GC content: 61.29

Gene sequence:

>930_bases
ATGACAATCTCTCAAACAGTTCCACGGGGCGCAGTGGCGGTTCGCCGGCGTCGCCGCATCCGCATCAGCACTGTGGTGTG
GTTCACGATGCCTGCTGCGGCAATCATGTTGCTGGTGCTCGGCGTCCCGCTGGTCTACTCGTTCTACTACAGCCTCACTG
GCTGGTCTCTCGTCGTTCCCGGCAGCGATCAGGACTTCATCGGCCTTCTCAATTATACCGATGTCTTGAGGAGCAGCGAG
TTCTGGGCGGCGATCCGCGTGACGCTGATCTATGCCGTGGTCGCGGTCTCGCTGGAATGCGCGCTCGGCATCCTCTTCGC
CGTGCTTTTGAACCTAGAATTCTTCGGCCGCGGCCTCTTTCGCTCGCTGATGCTGATCCCGATGGTGATCACCCCGGCGG
TCGTCGGCATCTTCTGGAAGCTGCTCTATGAGCAGGATTCCGGCGTCTTCAACTATCTGCTTGGAACCCTCGGCTTCGAG
CCGGTACCGTGGCTGAGCCTCACCGTGGCGCTCGCCTCCGTCATCATCGTGGACGTGTGGCAGTCGACGCCGTTCTTCAC
GCTGATCATTCTGGCGGGGCTGCAGTCCCTCGACCGCGACACGGTGAGCGCCGCGCAGGCGGACGGCGCCAATGCGCTCC
AGGTCTTCCGCTACCTGACGCTGCCGCATCTCGTCCCCTATATCATGATTGCCGCGGCATTTCGCATTATCGGCGTCATG
GCCGACTTCGACAAGATCTTCCTGTTGACGCTCGGTGGGCCGGGCAATGTCACGACGACGCTCAGCGTCTACGCCTACAA
CACCGGTTTCAAGGTCTTCGATATCGGCAGAACCACGGCGATCTCGTGGATCTATGTCGTCTTCGTTCTCGCGATCAGCG
CGCCCCTGATCTGGCGCCTGTTCCGCGGCGCAAGCGTCAACCGCCACTAG

Upstream 100 bases:

>100_bases
CGCGGCTATCTCAAAACCTGAGGTCGCGCTCCGTGGGGGGCAGGCGTTCCTCCCCGTCTGCCCCCCCTTTACAACGGCAA
ATCTGCAAGTAGTTTACCTG

Downstream 100 bases:

>100_bases
GGGAGGTGAGGCATGGCTATTTCATCCAACACCAGCCGCACCACCCGCAAGCTGCTCTGGACCCTCTTCTGGTGCGTGCT
CGCCTTCGTCTATCTGTTTC

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 308

Protein sequence:

>309_residues
MTISQTVPRGAVAVRRRRRIRISTVVWFTMPAAAIMLLVLGVPLVYSFYYSLTGWSLVVPGSDQDFIGLLNYTDVLRSSE
FWAAIRVTLIYAVVAVSLECALGILFAVLLNLEFFGRGLFRSLMLIPMVITPAVVGIFWKLLYEQDSGVFNYLLGTLGFE
PVPWLSLTVALASVIIVDVWQSTPFFTLIILAGLQSLDRDTVSAAQADGANALQVFRYLTLPHLVPYIMIAAAFRIIGVM
ADFDKIFLLTLGGPGNVTTTLSVYAYNTGFKVFDIGRTTAISWIYVVFVLAISAPLIWRLFRGASVNRH

Sequences:

>Translated_309_residues
MTISQTVPRGAVAVRRRRRIRISTVVWFTMPAAAIMLLVLGVPLVYSFYYSLTGWSLVVPGSDQDFIGLLNYTDVLRSSE
FWAAIRVTLIYAVVAVSLECALGILFAVLLNLEFFGRGLFRSLMLIPMVITPAVVGIFWKLLYEQDSGVFNYLLGTLGFE
PVPWLSLTVALASVIIVDVWQSTPFFTLIILAGLQSLDRDTVSAAQADGANALQVFRYLTLPHLVPYIMIAAAFRIIGVM
ADFDKIFLLTLGGPGNVTTTLSVYAYNTGFKVFDIGRTTAISWIYVVFVLAISAPLIWRLFRGASVNRH
>Mature_308_residues
TISQTVPRGAVAVRRRRRIRISTVVWFTMPAAAIMLLVLGVPLVYSFYYSLTGWSLVVPGSDQDFIGLLNYTDVLRSSEF
WAAIRVTLIYAVVAVSLECALGILFAVLLNLEFFGRGLFRSLMLIPMVITPAVVGIFWKLLYEQDSGVFNYLLGTLGFEP
VPWLSLTVALASVIIVDVWQSTPFFTLIILAGLQSLDRDTVSAAQADGANALQVFRYLTLPHLVPYIMIAAAFRIIGVMA
DFDKIFLLTLGGPGNVTTTLSVYAYNTGFKVFDIGRTTAISWIYVVFVLAISAPLIWRLFRGASVNRH

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain

Homologues:

Organism=Escherichia coli, GI1787570, Length=238, Percent_Identity=31.5126050420168, Blast_Score=108, Evalue=3e-25,
Organism=Escherichia coli, GI1789861, Length=223, Percent_Identity=26.457399103139, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI1790465, Length=195, Percent_Identity=29.2307692307692, Blast_Score=73, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4OQ_RHISN (P55602)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_444006.1
- ProteinModelPortal:   P55602
- SMR:   P55602
- GeneID:   962210
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a02190
- HOGENOM:   HBG739365
- InterPro:   IPR000515

Pfam domain/function: PF00528 BPD_transp_1

EC number: NA

Molecular weight: Translated: 34193; Mature: 34062

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xb427214)-; HASH(0xade3f98)-; HASH(0xb3c6330)-; HASH(0xc294b60)-; HASH(0xbca3518)-; HASH(0xc3677b4)-; HASH(0xbefaa70)-;

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHCCCCCCH
>Mature Secondary Structure 
TISQTVPRGAVAVRRRRRIRISTVVWFTMPAAAIMLLVLGVPLVYSFYYSLTGWSLVVP
CCCCCCCCHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
GSDQDFIGLLNYTDVLRSSEFWAAIRVTLIYAVVAVSLECALGILFAVLLNLEFFGRGLF
CCCCCCEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSLMLIPMVITPAVVGIFWKLLYEQDSGVFNYLLGTLGFEPVPWLSLTVALASVIIVDVW
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
QSTPFFTLIILAGLQSLDRDTVSAAQADGANALQVFRYLTLPHLVPYIMIAAAFRIIGVM
CCCHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADFDKIFLLTLGGPGNVTTTLSVYAYNTGFKVFDIGRTTAISWIYVVFVLAISAPLIWRL
HCCCEEEEEEECCCCCCEEEEEEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
FRGASVNRH
HHCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424