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Identifier: 16519858

GI number: 16519858

Start: 325620

End: 326879

Strand: Direct

Name: Not Available

Synonym: NGR_a02470

Alternate gene names: 16519858

Gene position: 325620-326879 (Clockwise)

Preceding gene: 16519859

Following gene: 16519857

Centisome position: 60.73

GC content: 62.54

Gene sequence:

>1260_bases
ATGACGATCGTGATGATCATTGTCTTCTGCGCACTGATGATGCTGGCAGTGCCGGTCGGTTACGCCCTGATTATCGCCGC
CGGCGTCGCGGTCCTGTTCAACGGCTATCTGCCGCTTTCGATTGTGGCGCAGCAGATTTATGACCAGACCCAATCCTTTC
CGATGCTCGCGCTGCCGTTCTTCATGCTGGCCGGCACGCTGATGCTTGGCGGTGAGCTCGGCCGGCAGCTGCTGGAGCTG
GCATCGCATGCGATGCAGCGCTGGCGGGGCGGACCCCTGTCGACCACCGTCGTTTCTTCCGTCGTGTTTGGCGGCGTCTC
CGGTTCCGCCGTGGCGAATGCCAGCGCCCTCGGATCCGTTCTTATCCCGTGGCAGAAAAAGCACGGCTTTCCGCCCGCGC
TCTGCGCGGCCAACAACGCGACCTCGGCGGTCATCGACGTTCTGATACCGCCGTCGATTCCCATGATCCTCTTCTCCCTG
GTAAGCGGCGTCAGTGTCGCCAACCTCTTCGTCGCGGGCATCTTGCCGGGCATCCTGATGGCCGCGAGCTTTGTCTTCGT
CTGCTGGTTCGTTTCGGTGAGGCGCGGCTACGCCTCGCAGCCCTCGCAGACCAGCAGGCGGCAGCTCGCCACGCTGGCAC
TGAAGAGCCTGCCCGCGGTGCTGCTGCCGGTGCTGATCATCCTATTCCTGCGGTTTGGCCTGGCCACGCCCACGGAAGTC
GCGGTGCTCTCGGTCGTCTATTCGCTCGCACTCAGCCTTCTTTACTACCGCGACCTGACATGGAAGCGATTCTGCGACAA
CGTGGTCGAGGCCGGCATGGCCACCGGCGTGGTCATGCTGGTCATCATGGGCAGTGCCGCCGTGGGTTGGGTCTTGACCT
TCGACCAGGCGCCGCAGCAGATGGCGGATTGGGTCGCCGCCAACATCTCGAGCCCGATCGTCATCATCCTAATGATGAAC
ATCCTGATGCTGATCGTCGGCATGCCGCTCGATATGCCGCCCGCCATCCTGCTGCTCGGACCCATCTTCGTTCCCCTTGC
CGACACGATCGGTCTGGACCGGGTCCAGCTTGGGCTGATGATGGTGATCAATCTTGGAATCGGGCTCTACACCCCCCCGA
TCGGCACGACGCTCTTCATCTCCTCGTCGATCGCCAAATCACCACTCGGCGAGACCACCCGTGAACTCTGGCCCTTCTTT
GCCATGGCGATGACGCTCCTTCTTGCGGTGAGCTTCATCCCGGCGCTCACGCTCTACTGA

Upstream 100 bases:

>100_bases
GATCCGTGCTGGTCGCGATCGTCACGCTCGCTGTCGCTCTGCGCGTGCTGCGCCTCGGTTGGGACCACCGGACGAATACC
GAAAGCGGCGAGGTGGCGCT

Downstream 100 bases:

>100_bases
GGACAGGACTATGACCGACGCCAGCAAAGACATCGTCTCGGTCCGATCACTTACCAAGTCGTATGGTGCGACAGTCGTGC
TCAAAGGCGTGGATTTTTCG

Product: TRAP dicarboxylate transporter, DctM-like subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 419; Mature: 418

Protein sequence:

>419_residues
MTIVMIIVFCALMMLAVPVGYALIIAAGVAVLFNGYLPLSIVAQQIYDQTQSFPMLALPFFMLAGTLMLGGELGRQLLEL
ASHAMQRWRGGPLSTTVVSSVVFGGVSGSAVANASALGSVLIPWQKKHGFPPALCAANNATSAVIDVLIPPSIPMILFSL
VSGVSVANLFVAGILPGILMAASFVFVCWFVSVRRGYASQPSQTSRRQLATLALKSLPAVLLPVLIILFLRFGLATPTEV
AVLSVVYSLALSLLYYRDLTWKRFCDNVVEAGMATGVVMLVIMGSAAVGWVLTFDQAPQQMADWVAANISSPIVIILMMN
ILMLIVGMPLDMPPAILLLGPIFVPLADTIGLDRVQLGLMMVINLGIGLYTPPIGTTLFISSSIAKSPLGETTRELWPFF
AMAMTLLLAVSFIPALTLY

Sequences:

>Translated_419_residues
MTIVMIIVFCALMMLAVPVGYALIIAAGVAVLFNGYLPLSIVAQQIYDQTQSFPMLALPFFMLAGTLMLGGELGRQLLEL
ASHAMQRWRGGPLSTTVVSSVVFGGVSGSAVANASALGSVLIPWQKKHGFPPALCAANNATSAVIDVLIPPSIPMILFSL
VSGVSVANLFVAGILPGILMAASFVFVCWFVSVRRGYASQPSQTSRRQLATLALKSLPAVLLPVLIILFLRFGLATPTEV
AVLSVVYSLALSLLYYRDLTWKRFCDNVVEAGMATGVVMLVIMGSAAVGWVLTFDQAPQQMADWVAANISSPIVIILMMN
ILMLIVGMPLDMPPAILLLGPIFVPLADTIGLDRVQLGLMMVINLGIGLYTPPIGTTLFISSSIAKSPLGETTRELWPFF
AMAMTLLLAVSFIPALTLY
>Mature_418_residues
TIVMIIVFCALMMLAVPVGYALIIAAGVAVLFNGYLPLSIVAQQIYDQTQSFPMLALPFFMLAGTLMLGGELGRQLLELA
SHAMQRWRGGPLSTTVVSSVVFGGVSGSAVANASALGSVLIPWQKKHGFPPALCAANNATSAVIDVLIPPSIPMILFSLV
SGVSVANLFVAGILPGILMAASFVFVCWFVSVRRGYASQPSQTSRRQLATLALKSLPAVLLPVLIILFLRFGLATPTEVA
VLSVVYSLALSLLYYRDLTWKRFCDNVVEAGMATGVVMLVIMGSAAVGWVLTFDQAPQQMADWVAANISSPIVIILMMNI
LMLIVGMPLDMPPAILLLGPIFVPLADTIGLDRVQLGLMMVINLGIGLYTPPIGTTLFISSSIAKSPLGETTRELWPFFA
MAMTLLLAVSFIPALTLY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yiaN/ygiK family

Homologues:

Organism=Escherichia coli, GI48994950, Length=417, Percent_Identity=31.6546762589928, Blast_Score=187, Evalue=1e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4ML_RHISN (P55571)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_443978.1
- GeneID:   962612
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a02470
- HOGENOM:   HBG563446
- ProtClustDB:   CLSK886350
- InterPro:   IPR010656
- InterPro:   IPR004681
- TIGRFAMs:   TIGR00786

Pfam domain/function: PF06808 DctM

EC number: NA

Molecular weight: Translated: 44625; Mature: 44493

Theoretical pI: Translated: 8.30; Mature: 8.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xba9a3e0)-; HASH(0xbd81874)-; HASH(0xad79414)-; HASH(0x96f37f8)-; HASH(0xb0b84a0)-; HASH(0xc35f270)-; HASH(0xbaea15c)-; HASH(0xaef571c)-; HASH(0xbe22af0)-; HASH(0xc2718cc)-; HASH(0xc544538)-; HASH(0xb99ac7c)-; HASH(0x403a5b34)-;

Cys/Met content:

1.0 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHCCCCCCCCCCHHHEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
>Mature Secondary Structure 
TIVMIIVFCALMMLAVPVGYALIIAAGVAVLFNGYLPLSIVAQQIYDQTQSFPMLALPF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHH
FMLAGTLMLGGELGRQLLELASHAMQRWRGGPLSTTVVSSVVFGGVSGSAVANASALGSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHH
LIPWQKKHGFPPALCAANNATSAVIDVLIPPSIPMILFSLVSGVSVANLFVAGILPGILM
CCCCHHCCCCCCHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AASFVFVCWFVSVRRGYASQPSQTSRRQLATLALKSLPAVLLPVLIILFLRFGLATPTEV
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
AVLSVVYSLALSLLYYRDLTWKRFCDNVVEAGMATGVVMLVIMGSAAVGWVLTFDQAPQQ
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHEEECCCCHHH
MADWVAANISSPIVIILMMNILMLIVGMPLDMPPAILLLGPIFVPLADTIGLDRVQLGLM
HHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHH
MVINLGIGLYTPPIGTTLFISSSIAKSPLGETTRELWPFFAMAMTLLLAVSFIPALTLY
HHHHHCCCCCCCCCCHHHEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424