Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 16519859

GI number: 16519859

Start: 323998

End: 325623

Strand: Direct

Name: Not Available

Synonym: NGR_a02460

Alternate gene names: 16519859

Gene position: 323998-325623 (Clockwise)

Preceding gene: 16519860

Following gene: 16519858

Centisome position: 60.43

GC content: 62.67

Gene sequence:

>1626_bases
GTGACGAAAACGGTCACCCGCGCTGGAGGAGCATCGGGGCCGCAACAGTTTCAAAGTGGAGGAGAGACAATGAAGTACGA
GATAACCAGACGCCGCTTCCTGGCCGCGTCATCGGCCGTGCTCGCGGCCCCTGCGATCGTCACGATGGTTCGGCCCGCAC
GGGCCGGCACGACACTGACCCTAGGCCATGGTGCCGCACCGGGAAATCCGCGAACTGTCGCGGCCGCGAAGTTTGCCGAA
CTGGTAGCCGAGAAGACAGCCGGTCGTGTGACCATCAATGTGGCCGGCGCGGAAACACTCGGCAGCGACGCCGCGATGCT
GACGAGCCTGCGCACCGGCGCGCTCGATGTCACAGCCAACAGCCAGGGAGCGACGTCCGCGCTCGTTCCGGAGCTTGCCG
CGCTCGGTCTTCCGTTCCTGTTCGAGAACACGGCGAAGGCGATGCAGGTTCTCGGTGGGCCCGTTGGCGCCGAACTCGTC
AAGCGCTTCGAAGCGGTCGGCGTGGTGCCGCTCGACTGGTGGGATAATGGCATTCGCCACCTCACCAATTCGAAGCGCAA
GGTCGCAGCCCCCGCCGAGGTGAGCGGAATGAAGATCCGCACGCCCGCCGACCCGATGACCATGGATATTTTTCAGGCTC
TCGGTGCGGCGACGGAGCAGATTGCCTTCGGCGAGCTCTACGTGGCTTTGCAGCAGGGCGTGGTCGACGGACAGGAGAAC
CCGCTCGCCAATATCGATAGCTCCAAGCTCTACGAGGTAAACAAGTACATCAGTCTCACCGGCCATAAATGGGAATCGAC
GCCGTTCCTGATGTCGCAGATTGCACAAGCCCGTCTAGGCGGCGATCTCGAGGCAGTGAAGGCGGCGGCCAAGGAAGCCG
GCGAACTGCAGCGCAAGCTTTCCGCCGACAAGGACGCAGAAGTGTTGGCAGCCTTCAGGCGCATTTCCGCGATCGAGGTC
ACCGAGGTGGACCGCGAAGGCTTCGCCAAGGCGACTGCTTCTGTTGTCGAGAGCAGAAGAAGCCCTTCGGGAATTTCGTC
GCCCAGATCGAATCGGCAGCCAAAGGCTGAGGCCTTGTCGGCGCGGGAGCATCCCATGAAAAGCCTCTCAAATCTCGTTG
AGCTGACGGCACGGGCCATCGTCTGGTTCGCGCGGCAGGTCGTCATATTCAGCGGCATCGCACTCATGGTCTTCATGACC
GCGAATGTCGCTGCCCGCTACGTGCTGGCCGGCGGAGGCTTTTCATTCGCTCAGGAGCTACCGGTGCTGATCTTTCCCTG
GTTCATCCTCGGCGGCATCGTGCTGGCGGCCCATTCCGGCGGCCATATGGCGGTCGAGTGGATCTACGACAAACTCCGGG
ATGGCGCACGTTCAACTGCATTTGTCGCCGCCAATCTCGTCAGCGCCGGAGCTTTCCTGATGCTCGGCTACCAGGCCTAT
CTTGTTGGCGAGATCGCCGGGATCGAACACAGCCCGGTCCTCCAATTGCCCAACAGCGTCGGGTATTTCGCCCTTGCCGT
AGGATCCGTGCTGGTCGCGATCGTCACGCTCGCTGTCGCTCTGCGCGTGCTGCGCCTCGGTTGGGACCACCGGACGAATA
CCGAAAGCGGCGAGGTGGCGCTATGA

Upstream 100 bases:

>100_bases
CCGACGCCTTTCTAGAAGCGGGCGCCCTGCCGACCCTGCACGACATGTACGGCATATCGACCACGAAAATCGTGGCCCAG
ATCAAGGAGTGGCTCGACGA

Downstream 100 bases:

>100_bases
CGATCGTGATGATCATTGTCTTCTGCGCACTGATGATGCTGGCAGTGCCGGTCGGTTACGCCCTGATTATCGCCGCCGGC
GTCGCGGTCCTGTTCAACGG

Product: TRAP dicarboxylate transporter, DctP-like subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 541; Mature: 540

Protein sequence:

>541_residues
MTKTVTRAGGASGPQQFQSGGETMKYEITRRRFLAASSAVLAAPAIVTMVRPARAGTTLTLGHGAAPGNPRTVAAAKFAE
LVAEKTAGRVTINVAGAETLGSDAAMLTSLRTGALDVTANSQGATSALVPELAALGLPFLFENTAKAMQVLGGPVGAELV
KRFEAVGVVPLDWWDNGIRHLTNSKRKVAAPAEVSGMKIRTPADPMTMDIFQALGAATEQIAFGELYVALQQGVVDGQEN
PLANIDSSKLYEVNKYISLTGHKWESTPFLMSQIAQARLGGDLEAVKAAAKEAGELQRKLSADKDAEVLAAFRRISAIEV
TEVDREGFAKATASVVESRRSPSGISSPRSNRQPKAEALSAREHPMKSLSNLVELTARAIVWFARQVVIFSGIALMVFMT
ANVAARYVLAGGGFSFAQELPVLIFPWFILGGIVLAAHSGGHMAVEWIYDKLRDGARSTAFVAANLVSAGAFLMLGYQAY
LVGEIAGIEHSPVLQLPNSVGYFALAVGSVLVAIVTLAVALRVLRLGWDHRTNTESGEVAL

Sequences:

>Translated_541_residues
MTKTVTRAGGASGPQQFQSGGETMKYEITRRRFLAASSAVLAAPAIVTMVRPARAGTTLTLGHGAAPGNPRTVAAAKFAE
LVAEKTAGRVTINVAGAETLGSDAAMLTSLRTGALDVTANSQGATSALVPELAALGLPFLFENTAKAMQVLGGPVGAELV
KRFEAVGVVPLDWWDNGIRHLTNSKRKVAAPAEVSGMKIRTPADPMTMDIFQALGAATEQIAFGELYVALQQGVVDGQEN
PLANIDSSKLYEVNKYISLTGHKWESTPFLMSQIAQARLGGDLEAVKAAAKEAGELQRKLSADKDAEVLAAFRRISAIEV
TEVDREGFAKATASVVESRRSPSGISSPRSNRQPKAEALSAREHPMKSLSNLVELTARAIVWFARQVVIFSGIALMVFMT
ANVAARYVLAGGGFSFAQELPVLIFPWFILGGIVLAAHSGGHMAVEWIYDKLRDGARSTAFVAANLVSAGAFLMLGYQAY
LVGEIAGIEHSPVLQLPNSVGYFALAVGSVLVAIVTLAVALRVLRLGWDHRTNTESGEVAL
>Mature_540_residues
TKTVTRAGGASGPQQFQSGGETMKYEITRRRFLAASSAVLAAPAIVTMVRPARAGTTLTLGHGAAPGNPRTVAAAKFAEL
VAEKTAGRVTINVAGAETLGSDAAMLTSLRTGALDVTANSQGATSALVPELAALGLPFLFENTAKAMQVLGGPVGAELVK
RFEAVGVVPLDWWDNGIRHLTNSKRKVAAPAEVSGMKIRTPADPMTMDIFQALGAATEQIAFGELYVALQQGVVDGQENP
LANIDSSKLYEVNKYISLTGHKWESTPFLMSQIAQARLGGDLEAVKAAAKEAGELQRKLSADKDAEVLAAFRRISAIEVT
EVDREGFAKATASVVESRRSPSGISSPRSNRQPKAEALSAREHPMKSLSNLVELTARAIVWFARQVVIFSGIALMVFMTA
NVAARYVLAGGGFSFAQELPVLIFPWFILGGIVLAAHSGGHMAVEWIYDKLRDGARSTAFVAANLVSAGAFLMLGYQAYL
VGEIAGIEHSPVLQLPNSVGYFALAVGSVLVAIVTLAVALRVLRLGWDHRTNTESGEVAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 7 family

Homologues:

Organism=Escherichia coli, GI1790004, Length=286, Percent_Identity=33.2167832167832, Blast_Score=172, Evalue=6e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4MM_RHISN (P55572)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_443979.1
- ProteinModelPortal:   P55572
- SMR:   P55572
- GeneID:   962561
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a02460
- GO:   GO:0006810
- InterPro:   IPR007387
- InterPro:   IPR018389
- InterPro:   IPR006311
- InterPro:   IPR004682
- TIGRFAMs:   TIGR00787
- TIGRFAMs:   TIGR01409

Pfam domain/function: PF04290 DctQ; PF03480 SBP_bac_7

EC number: NA

Molecular weight: Translated: 57124; Mature: 56993

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: PS51318 TAT

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x403be4e8)-; HASH(0xbdf2c78)-; HASH(0xc501f7c)-; HASH(0xc4420c0)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKTVTRAGGASGPQQFQSGGETMKYEITRRRFLAASSAVLAAPAIVTMVRPARAGTTLT
CCCCCCCCCCCCCHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
LGHGAAPGNPRTVAAAKFAELVAEKTAGRVTINVAGAETLGSDAAMLTSLRTGALDVTAN
ECCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHCCCCHHHHHHHCCCCEEEECC
SQGATSALVPELAALGLPFLFENTAKAMQVLGGPVGAELVKRFEAVGVVPLDWWDNGIRH
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEHHHHHHHHH
LTNSKRKVAAPAEVSGMKIRTPADPMTMDIFQALGAATEQIAFGELYVALQQGVVDGQEN
HCCCCCEECCCCCCCCEEEECCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCC
PLANIDSSKLYEVNKYISLTGHKWESTPFLMSQIAQARLGGDLEAVKAAAKEAGELQRKL
CCCCCCCHHHEEHHHEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
SADKDAEVLAAFRRISAIEVTEVDREGFAKATASVVESRRSPSGISSPRSNRQPKAEALS
CCCCCHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH
AREHPMKSLSNLVELTARAIVWFARQVVIFSGIALMVFMTANVAARYVLAGGGFSFAQEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHC
PVLIFPWFILGGIVLAAHSGGHMAVEWIYDKLRDGARSTAFVAANLVSAGAFLMLGYQAY
CHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
LVGEIAGIEHSPVLQLPNSVGYFALAVGSVLVAIVTLAVALRVLRLGWDHRTNTESGEVA
HHHHHCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
L
H
>Mature Secondary Structure 
TKTVTRAGGASGPQQFQSGGETMKYEITRRRFLAASSAVLAAPAIVTMVRPARAGTTLT
CCCCCCCCCCCCHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
LGHGAAPGNPRTVAAAKFAELVAEKTAGRVTINVAGAETLGSDAAMLTSLRTGALDVTAN
ECCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHCCCCHHHHHHHCCCCEEEECC
SQGATSALVPELAALGLPFLFENTAKAMQVLGGPVGAELVKRFEAVGVVPLDWWDNGIRH
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEHHHHHHHHH
LTNSKRKVAAPAEVSGMKIRTPADPMTMDIFQALGAATEQIAFGELYVALQQGVVDGQEN
HCCCCCEECCCCCCCCEEEECCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCC
PLANIDSSKLYEVNKYISLTGHKWESTPFLMSQIAQARLGGDLEAVKAAAKEAGELQRKL
CCCCCCCHHHEEHHHEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
SADKDAEVLAAFRRISAIEVTEVDREGFAKATASVVESRRSPSGISSPRSNRQPKAEALS
CCCCCHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH
AREHPMKSLSNLVELTARAIVWFARQVVIFSGIALMVFMTANVAARYVLAGGGFSFAQEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHC
PVLIFPWFILGGIVLAAHSGGHMAVEWIYDKLRDGARSTAFVAANLVSAGAFLMLGYQAY
CHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
LVGEIAGIEHSPVLQLPNSVGYFALAVGSVLVAIVTLAVALRVLRLGWDHRTNTESGEVA
HHHHHCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
L
H

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424