Definition | Sinorhizobium fredii NGR234 plasmid pNGR234a, complete sequence. |
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Accession | NC_000914 |
Length | 536,165 |
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The map label for this gene is cpxU
Identifier: 16519831
GI number: 16519831
Start: 362088
End: 363431
Strand: Direct
Name: cpxU
Synonym: NGR_a02740
Alternate gene names: 16519831
Gene position: 362088-363431 (Clockwise)
Preceding gene: 16519832
Following gene: 16519830
Centisome position: 67.53
GC content: 67.41
Gene sequence:
>1344_bases ATGAACGTGCTGCTCAACCCCCTAAACCGTCGGCACCGGCTGCGGTACGACATCCCCGTCATGCCCGGCGCTTTCCCCCT GGTCGGGCATCTTCCCGCCATCGTCTGCGACCTGCCGCGCCTGCTGCGGCGCGCGGAACGGACGCTGGGCAGCCACTTCT GGCTGGATTTCGGCCCTGCCGGACACCTGATGACCTGCGTGGATCCGCATGCGTTCGCACTGCTCCGGCACAAGGACGTG TCCTCGGCGCTGATCGAAGAGATCGCGCCCGAATTGCTTGGCGGAACGTTGGTCGCCCAGGACGGCGGCGCGCACCGGCA GGCGCGCGATGCGATTAAGGCGGCGTTCCTGCCCGAGGGGCTGACCCAGGCCGGCATCGGCGACCTGTTCGCGCCCGTTA TCCGGGCGCGGGTGCAGGCGTGGCGCGACCGCGGCGACGTAACCATCCTGCCCGAAACCGGCGACCTGATGCTCAAGCTC ATCTTCACCCTCATGGGAGTCCCTGCGCAGGACCTGCCGGGATGGCATCGCAAGTACCGGCAACTACTGCAGTTGATCGT CGCGCCCTCGGTCGACCTGCCTGGACTGCCCTTGCGGCGCGGCCGCGCCGCCCGCGACTGGATCGACGCGCAGTTGCGCC AGTTCGTCCGCGACGCACGCGCGCATGCCGCGCGCACCGGGTTGATCAACGACATGGTGAGTGCCTTCGACCGCAGCGAC GATGCGCTCTCCGATGACCTCCTGGTCGCCAATATCCGCTTGCTGCTGCTTGCCGGTCACGACACCACCGCCTCGACGAT GGCCTGGATGGTGATCGAACTGGCGCGGCAGCCTATGCTGTGGGATGCCCTGGTCGAGGAGGCACAACGCGTAGGCGCGG TGCCGACCCGGCACGCGGACCTGGAGCAGTGTCCGGTCGCCGAGGCGCTGTTCCGCGAGACGCTGCGCGTGCATCCGGCG ACGACGCTCCTGCCGCGTCGCGCGCTGCAGGAACTGCAACTCGGCCAACGGCGCATTCCGGCGGGCACCCATCTGTGCAT CCCGCTGCTGCATTTCTCGACCTCGGCGCTGCTGCACGAGGCGCCTGATCAGTTCCGCCTGGCGCGGTGGCTGCAACGTA CGGAGCCGATTCGGCCGGTGGACATGCTGCAGTTCGGTACCGGCCCACACGTTTGCATCGGCTATCACCTGGTATGGCTG GAACTGGTGCAGTTCTCCATCGCCTTGGCGCTGACCATGCACAAGGCCGGGGTGCGGCCGCTGTTGCTGAGCGGCGTCGA AAAAGGCCGGCGCTATTACCCGACCGCACATCCGTCCATGACAATCCGCATCGGATTCTCATGA
Upstream 100 bases:
>100_bases TCGACGGCGGCATGCTGGCGCATATGCCGACGTACGCCGACGGTGGCAACAGCTGCGCCGGGCGGACTGCGGGCGACACC GCCGAAACGGCGCGCTGCTG
Downstream 100 bases:
>100_bases GCTGGCATCGCATGCCCCGTGTGGCGAGGCAGCGGCACCGGCGACGCGCGGCATTGCTGCATTCGGCGCGCGCGTTCGGT GCGACGCGGCAACACCGCGG
Product: cytochrome P450
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 447; Mature: 447
Protein sequence:
>447_residues MNVLLNPLNRRHRLRYDIPVMPGAFPLVGHLPAIVCDLPRLLRRAERTLGSHFWLDFGPAGHLMTCVDPHAFALLRHKDV SSALIEEIAPELLGGTLVAQDGGAHRQARDAIKAAFLPEGLTQAGIGDLFAPVIRARVQAWRDRGDVTILPETGDLMLKL IFTLMGVPAQDLPGWHRKYRQLLQLIVAPSVDLPGLPLRRGRAARDWIDAQLRQFVRDARAHAARTGLINDMVSAFDRSD DALSDDLLVANIRLLLLAGHDTTASTMAWMVIELARQPMLWDALVEEAQRVGAVPTRHADLEQCPVAEALFRETLRVHPA TTLLPRRALQELQLGQRRIPAGTHLCIPLLHFSTSALLHEAPDQFRLARWLQRTEPIRPVDMLQFGTGPHVCIGYHLVWL ELVQFSIALALTMHKAGVRPLLLSGVEKGRRYYPTAHPSMTIRIGFS
Sequences:
>Translated_447_residues MNVLLNPLNRRHRLRYDIPVMPGAFPLVGHLPAIVCDLPRLLRRAERTLGSHFWLDFGPAGHLMTCVDPHAFALLRHKDV SSALIEEIAPELLGGTLVAQDGGAHRQARDAIKAAFLPEGLTQAGIGDLFAPVIRARVQAWRDRGDVTILPETGDLMLKL IFTLMGVPAQDLPGWHRKYRQLLQLIVAPSVDLPGLPLRRGRAARDWIDAQLRQFVRDARAHAARTGLINDMVSAFDRSD DALSDDLLVANIRLLLLAGHDTTASTMAWMVIELARQPMLWDALVEEAQRVGAVPTRHADLEQCPVAEALFRETLRVHPA TTLLPRRALQELQLGQRRIPAGTHLCIPLLHFSTSALLHEAPDQFRLARWLQRTEPIRPVDMLQFGTGPHVCIGYHLVWL ELVQFSIALALTMHKAGVRPLLLSGVEKGRRYYPTAHPSMTIRIGFS >Mature_447_residues MNVLLNPLNRRHRLRYDIPVMPGAFPLVGHLPAIVCDLPRLLRRAERTLGSHFWLDFGPAGHLMTCVDPHAFALLRHKDV SSALIEEIAPELLGGTLVAQDGGAHRQARDAIKAAFLPEGLTQAGIGDLFAPVIRARVQAWRDRGDVTILPETGDLMLKL IFTLMGVPAQDLPGWHRKYRQLLQLIVAPSVDLPGLPLRRGRAARDWIDAQLRQFVRDARAHAARTGLINDMVSAFDRSD DALSDDLLVANIRLLLLAGHDTTASTMAWMVIELARQPMLWDALVEEAQRVGAVPTRHADLEQCPVAEALFRETLRVHPA TTLLPRRALQELQLGQRRIPAGTHLCIPLLHFSTSALLHEAPDQFRLARWLQRTEPIRPVDMLQFGTGPHVCIGYHLVWL ELVQFSIALALTMHKAGVRPLLLSGVEKGRRYYPTAHPSMTIRIGFS
Specific function: Cytochromes P450 are a group of heme-thiolate monooxygenases. They oxidize a variety of structurally unrelated compounds, including steroids, fatty acids, and xenobiotics
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family
Homologues:
Organism=Homo sapiens, GI55770850, Length=165, Percent_Identity=34.5454545454545, Blast_Score=89, Evalue=7e-18, Organism=Homo sapiens, GI16933530, Length=425, Percent_Identity=24.2352941176471, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI4503231, Length=200, Percent_Identity=28.5, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI167466231, Length=170, Percent_Identity=35.2941176470588, Blast_Score=80, Evalue=5e-15, Organism=Homo sapiens, GI4503213, Length=238, Percent_Identity=32.3529411764706, Blast_Score=79, Evalue=6e-15, Organism=Homo sapiens, GI16933528, Length=348, Percent_Identity=25.2873563218391, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI153218646, Length=172, Percent_Identity=30.8139534883721, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI153218654, Length=172, Percent_Identity=30.8139534883721, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI4503211, Length=175, Percent_Identity=29.1428571428571, Blast_Score=77, Evalue=4e-14, Organism=Homo sapiens, GI6005737, Length=210, Percent_Identity=26.1904761904762, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI13435386, Length=196, Percent_Identity=27.0408163265306, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI150036266, Length=235, Percent_Identity=26.8085106382979, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI193083180, Length=200, Percent_Identity=26, Blast_Score=73, Evalue=4e-13, Organism=Homo sapiens, GI193083178, Length=200, Percent_Identity=26, Blast_Score=73, Evalue=4e-13, Organism=Homo sapiens, GI16933533, Length=210, Percent_Identity=24.7619047619048, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI262290932, Length=196, Percent_Identity=25.5102040816327, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI4503195, Length=172, Percent_Identity=33.7209302325581, Blast_Score=70, Evalue=5e-12, Organism=Homo sapiens, GI13435391, Length=239, Percent_Identity=24.2677824267782, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI119220562, Length=239, Percent_Identity=24.6861924686192, Blast_Score=68, Evalue=2e-11, Organism=Homo sapiens, GI261278372, Length=299, Percent_Identity=26.7558528428094, Blast_Score=66, Evalue=5e-11, Organism=Homo sapiens, GI261278370, Length=299, Percent_Identity=26.7558528428094, Blast_Score=66, Evalue=5e-11, Organism=Homo sapiens, GI195972896, Length=299, Percent_Identity=26.7558528428094, Blast_Score=66, Evalue=7e-11, Organism=Homo sapiens, GI195972898, Length=299, Percent_Identity=26.7558528428094, Blast_Score=66, Evalue=7e-11, Organism=Caenorhabditis elegans, GI71998720, Length=202, Percent_Identity=25.7425742574257, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI72001056, Length=170, Percent_Identity=25.8823529411765, Blast_Score=69, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17536183, Length=217, Percent_Identity=28.110599078341, Blast_Score=68, Evalue=9e-12, Organism=Caenorhabditis elegans, GI17536177, Length=169, Percent_Identity=29.585798816568, Blast_Score=68, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17553064, Length=201, Percent_Identity=28.3582089552239, Blast_Score=68, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17553062, Length=202, Percent_Identity=29.7029702970297, Blast_Score=67, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6321795, Length=238, Percent_Identity=24.7899159663866, Blast_Score=70, Evalue=8e-13, Organism=Drosophila melanogaster, GI17933518, Length=164, Percent_Identity=28.0487804878049, Blast_Score=83, Evalue=5e-16, Organism=Drosophila melanogaster, GI24639289, Length=191, Percent_Identity=26.7015706806283, Blast_Score=81, Evalue=2e-15, Organism=Drosophila melanogaster, GI24639287, Length=191, Percent_Identity=26.7015706806283, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI24642101, Length=173, Percent_Identity=27.1676300578035, Blast_Score=79, Evalue=5e-15, Organism=Drosophila melanogaster, GI24656064, Length=169, Percent_Identity=28.4023668639053, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI221330299, Length=196, Percent_Identity=26.0204081632653, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI45552561, Length=163, Percent_Identity=30.6748466257669, Blast_Score=73, Evalue=5e-13, Organism=Drosophila melanogaster, GI28573913, Length=163, Percent_Identity=30.6748466257669, Blast_Score=73, Evalue=5e-13, Organism=Drosophila melanogaster, GI45552577, Length=370, Percent_Identity=24.5945945945946, Blast_Score=72, Evalue=6e-13, Organism=Drosophila melanogaster, GI24652454, Length=163, Percent_Identity=30.6748466257669, Blast_Score=72, Evalue=7e-13, Organism=Drosophila melanogaster, GI24943083, Length=370, Percent_Identity=24.5945945945946, Blast_Score=72, Evalue=8e-13, Organism=Drosophila melanogaster, GI24641483, Length=158, Percent_Identity=31.0126582278481, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI28571357, Length=158, Percent_Identity=31.0126582278481, Blast_Score=69, Evalue=7e-12, Organism=Drosophila melanogaster, GI24648130, Length=165, Percent_Identity=29.0909090909091, Blast_Score=66, Evalue=6e-11, Organism=Drosophila melanogaster, GI24641418, Length=228, Percent_Identity=26.7543859649123, Blast_Score=65, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CPXU_RHISN (P55540)
Other databases:
- EMBL: U00090 - PIR: T10876 - RefSeq: NP_443951.1 - ProteinModelPortal: P55540 - GeneID: 962613 - GenomeReviews: U00090_GR - KEGG: rhi:NGR_a02740 - HOGENOM: HBG688697 - ProtClustDB: CLSK864467 - InterPro: IPR001128 - InterPro: IPR017972 - InterPro: IPR002403 - Gene3D: G3DSA:1.10.630.10 - PANTHER: PTHR19383 - PRINTS: PR00465 - PRINTS: PR00385
Pfam domain/function: PF00067 p450; SSF48264 Cytochrome_P450
EC number: NA
Molecular weight: Translated: 49856; Mature: 49856
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVLLNPLNRRHRLRYDIPVMPGAFPLVGHLPAIVCDLPRLLRRAERTLGSHFWLDFGPA CCCCCCCCCHHCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCC GHLMTCVDPHAFALLRHKDVSSALIEEIAPELLGGTLVAQDGGAHRQARDAIKAAFLPEG CCEEEECCHHHHHHHHHCCHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHCCCC LTQAGIGDLFAPVIRARVQAWRDRGDVTILPETGDLMLKLIFTLMGVPAQDLPGWHRKYR CHHHCHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCHHHHHHH QLLQLIVAPSVDLPGLPLRRGRAARDWIDAQLRQFVRDARAHAARTGLINDMVSAFDRSD HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DALSDDLLVANIRLLLLAGHDTTASTMAWMVIELARQPMLWDALVEEAQRVGAVPTRHAD CCCCCCHHHEEEEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCC LEQCPVAEALFRETLRVHPATTLLPRRALQELQLGQRRIPAGTHLCIPLLHFSTSALLHE HHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHCCCCCCHHHHHHHHHHHHHHHHC APDQFRLARWLQRTEPIRPVDMLQFGTGPHVCIGYHLVWLELVQFSIALALTMHKAGVRP CCHHHHHHHHHHHCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH LLLSGVEKGRRYYPTAHPSMTIRIGFS HHHHHHHHCCCCCCCCCCCEEEEEECC >Mature Secondary Structure MNVLLNPLNRRHRLRYDIPVMPGAFPLVGHLPAIVCDLPRLLRRAERTLGSHFWLDFGPA CCCCCCCCCHHCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCC GHLMTCVDPHAFALLRHKDVSSALIEEIAPELLGGTLVAQDGGAHRQARDAIKAAFLPEG CCEEEECCHHHHHHHHHCCHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHCCCC LTQAGIGDLFAPVIRARVQAWRDRGDVTILPETGDLMLKLIFTLMGVPAQDLPGWHRKYR CHHHCHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCHHHHHHH QLLQLIVAPSVDLPGLPLRRGRAARDWIDAQLRQFVRDARAHAARTGLINDMVSAFDRSD HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DALSDDLLVANIRLLLLAGHDTTASTMAWMVIELARQPMLWDALVEEAQRVGAVPTRHAD CCCCCCHHHEEEEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCC LEQCPVAEALFRETLRVHPATTLLPRRALQELQLGQRRIPAGTHLCIPLLHFSTSALLHE HHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHCCCCCCHHHHHHHHHHHHHHHHC APDQFRLARWLQRTEPIRPVDMLQFGTGPHVCIGYHLVWLELVQFSIALALTMHKAGVRP CCHHHHHHHHHHHCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH LLLSGVEKGRRYYPTAHPSMTIRIGFS HHHHHHHHCCCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424