Definition | Sinorhizobium fredii NGR234 plasmid pNGR234a, complete sequence. |
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Accession | NC_000914 |
Length | 536,165 |
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Identifier: 16519829
GI number: 16519829
Start: 364894
End: 366444
Strand: Direct
Name: Not Available
Synonym: NGR_a02760
Alternate gene names: NA
Gene position: 364894-366444 (Clockwise)
Preceding gene: 16519830
Following gene: 16519828
Centisome position: 68.06
GC content: 69.37
Gene sequence:
>1551_bases GTGAATGCGCTGTCCGAACAGATCCTTTTCGAATTGCGCCACCTGCTGAGCGAGATGAGCGACGGCGGCAGCGTCGGTCC GTCCGTCTACGACACGGCGCGGGCTCTGCAGTTTGGCGGCAACGTCACCGGTCGGCAGGACGCATACGCGTGGCTCCTCG CGCAGCAACAGGCCGATGGCGGATGGGGAAGCGCGGACTTCCCGCTGTTCCGCCATGCGCCCACGTGGGCGGCGTTGCTG GCATTGCAGCGTGCCGATCCTCTTCCCGGCGCTGCCGACGCAGTCCAGGCTGCAACCCGGTTCCTCGAGCGCCAGGCCGA TCCCTACGCGCATGCGGTGCCGGAAGACGCGCCGATCGGCGCGGAGCTGATCCTGCCGCAGTTGTGCGGCGAGGCCGCAT CCTTGTTGGGCGGCGTGGCGTTTCCGCGCCACCCCGCGCTGTTGCCGTTGCGGCAAGCGTGCTTGGTCAAGCTGGGGGCG GTGGCGACGTTGCCGAGCGGCCATCCGTTGCTGCACTCCTGGGAGGCCTGGGGGACGTGGCCAACCGCCGCATGCCCGGA TGACGACGGCAGCATCGGCATCAGTCCGGCGGCCACCGCTGCGTGGCGTGCGCACGCCGTGACACAGGGGAGCACGCCGC AGGTCGGGCGCGCCGACGCGTATCTGCAGGCGGCATCGCGGGCGACGCGCAGCGGCATCGAAGGTGTCGTTCCCAACGTC TGGCCGATCAATGTGTTCGAGCCATGCTGGTCGCTGTACACTCTACATTTGGCCGGGCTGTTCGCGCATCCCGCGCTCGA CGAGGCGGTGCGCGTGATCGTCGCGCAGCTCGACGCCCGCCTGGGCGTGCGCGGTCTGGGCCCGGCCTTGCACTTCGCGG CTGATGCGGACGACACCGCCGTTGCCTTGTGCGTCCTGCGCCTTGCAGGCCGCGACCCGGCGGTCGATGCGTTGCGCCAT TTCGAAATCGGCGAGCTGTTCGTCACCTTCCCCGGCGAGCGCAACGCCTCGGTGTCGACCAACATCCATGCCCTGCATGC GTTGCGACTATTGGGAAAGCCTGCCGCTGGCACCAGCGCCTACGTCGAGGCCAATCGCAACCCTCACGGTCTATGGGACA ATGAAAAATGGCACGTTTCGTGGCTGTATCCCACCGCGCATGCCGTCGCTGCGCTGGCGCAAGGCAAGCCCCAGTGGCGC GACGAGCGCGCGCTGGCGGCGCTGCTGCAGGCGCAGCGCGACGACGGCGGCTGGGGCGCCGGTCGCGCGTCCACATTCGA GGAAACCGCCTATGCGCTGTTCGCGTTGCACGTGATGGACGGGAGCGAAGAGCCGACAGGGCGCCGGCGCATCGCGCAGG CGGTGGCGCGTGCGCTGGAGTGGATGCTCGCCCGCCATGCGGCGCCTGCATTGCCGCAGATGCCGCTGTGGATCGGCAAG GAACTGTATTGCCCCATCCGGGTCGTGCGCGTGGCCGAACTCGCCGGGTTGTGGCTGGCGCTTCGTTGGGGGCCGCGCGT CCCGGCCGAGGGAGCAGGAGCGGCGCCATGA
Upstream 100 bases:
>100_bases GGCGCTGCCCATGCGGCGGGCCGCAACGGGCCTGCGGCGACGTGCGCGCCGTCTGCCCGATCCTGGTTCTCGTCAACCGT CTGCAGAAGGAACATCCCCC
Downstream 100 bases:
>100_bases TCCCGACCGAACGCGGGCTGCAGCAGGTGCTGGAGTGGGGGCGTTCCCTGACCGGGTTCGCCGACGAGCATGCCGCGGAA GCCGTCAGGGGCGGCCAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: ORF7 [H]
Number of amino acids: Translated: 516; Mature: 516
Protein sequence:
>516_residues MNALSEQILFELRHLLSEMSDGGSVGPSVYDTARALQFGGNVTGRQDAYAWLLAQQQADGGWGSADFPLFRHAPTWAALL ALQRADPLPGAADAVQAATRFLERQADPYAHAVPEDAPIGAELILPQLCGEAASLLGGVAFPRHPALLPLRQACLVKLGA VATLPSGHPLLHSWEAWGTWPTAACPDDDGSIGISPAATAAWRAHAVTQGSTPQVGRADAYLQAASRATRSGIEGVVPNV WPINVFEPCWSLYTLHLAGLFAHPALDEAVRVIVAQLDARLGVRGLGPALHFAADADDTAVALCVLRLAGRDPAVDALRH FEIGELFVTFPGERNASVSTNIHALHALRLLGKPAAGTSAYVEANRNPHGLWDNEKWHVSWLYPTAHAVAALAQGKPQWR DERALAALLQAQRDDGGWGAGRASTFEETAYALFALHVMDGSEEPTGRRRIAQAVARALEWMLARHAAPALPQMPLWIGK ELYCPIRVVRVAELAGLWLALRWGPRVPAEGAGAAP
Sequences:
>Translated_516_residues MNALSEQILFELRHLLSEMSDGGSVGPSVYDTARALQFGGNVTGRQDAYAWLLAQQQADGGWGSADFPLFRHAPTWAALL ALQRADPLPGAADAVQAATRFLERQADPYAHAVPEDAPIGAELILPQLCGEAASLLGGVAFPRHPALLPLRQACLVKLGA VATLPSGHPLLHSWEAWGTWPTAACPDDDGSIGISPAATAAWRAHAVTQGSTPQVGRADAYLQAASRATRSGIEGVVPNV WPINVFEPCWSLYTLHLAGLFAHPALDEAVRVIVAQLDARLGVRGLGPALHFAADADDTAVALCVLRLAGRDPAVDALRH FEIGELFVTFPGERNASVSTNIHALHALRLLGKPAAGTSAYVEANRNPHGLWDNEKWHVSWLYPTAHAVAALAQGKPQWR DERALAALLQAQRDDGGWGAGRASTFEETAYALFALHVMDGSEEPTGRRRIAQAVARALEWMLARHAAPALPQMPLWIGK ELYCPIRVVRVAELAGLWLALRWGPRVPAEGAGAAP >Mature_516_residues MNALSEQILFELRHLLSEMSDGGSVGPSVYDTARALQFGGNVTGRQDAYAWLLAQQQADGGWGSADFPLFRHAPTWAALL ALQRADPLPGAADAVQAATRFLERQADPYAHAVPEDAPIGAELILPQLCGEAASLLGGVAFPRHPALLPLRQACLVKLGA VATLPSGHPLLHSWEAWGTWPTAACPDDDGSIGISPAATAAWRAHAVTQGSTPQVGRADAYLQAASRATRSGIEGVVPNV WPINVFEPCWSLYTLHLAGLFAHPALDEAVRVIVAQLDARLGVRGLGPALHFAADADDTAVALCVLRLAGRDPAVDALRH FEIGELFVTFPGERNASVSTNIHALHALRLLGKPAAGTSAYVEANRNPHGLWDNEKWHVSWLYPTAHAVAALAQGKPQWR DERALAALLQAQRDDGGWGAGRASTFEETAYALFALHVMDGSEEPTGRRRIAQAVARALEWMLARHAAPALPQMPLWIGK ELYCPIRVVRVAELAGLWLALRWGPRVPAEGAGAAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 PFTB repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008930 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55109; Mature: 55109
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNALSEQILFELRHLLSEMSDGGSVGPSVYDTARALQFGGNVTGRQDAYAWLLAQQQADG CCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCC GWGSADFPLFRHAPTWAALLALQRADPLPGAADAVQAATRFLERQADPYAHAVPEDAPIG CCCCCCCCHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHCCCCCCCCC AELILPQLCGEAASLLGGVAFPRHPALLPLRQACLVKLGAVATLPSGHPLLHSWEAWGTW HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCC PTAACPDDDGSIGISPAATAAWRAHAVTQGSTPQVGRADAYLQAASRATRSGIEGVVPNV CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC WPINVFEPCWSLYTLHLAGLFAHPALDEAVRVIVAQLDARLGVRGLGPALHFAADADDTA CCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCHHHEEECCCCHHH VALCVLRLAGRDPAVDALRHFEIGELFVTFPGERNASVSTNIHALHALRLLGKPAAGTSA HHHHHHHHCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCE YVEANRNPHGLWDNEKWHVSWLYPTAHAVAALAQGKPQWRDERALAALLQAQRDDGGWGA EEECCCCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCC GRASTFEETAYALFALHVMDGSEEPTGRRRIAQAVARALEWMLARHAAPALPQMPLWIGK CCCCHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCC ELYCPIRVVRVAELAGLWLALRWGPRVPAEGAGAAP CCCCHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCC >Mature Secondary Structure MNALSEQILFELRHLLSEMSDGGSVGPSVYDTARALQFGGNVTGRQDAYAWLLAQQQADG CCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCC GWGSADFPLFRHAPTWAALLALQRADPLPGAADAVQAATRFLERQADPYAHAVPEDAPIG CCCCCCCCHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHCCCCCCCCC AELILPQLCGEAASLLGGVAFPRHPALLPLRQACLVKLGAVATLPSGHPLLHSWEAWGTW HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCC PTAACPDDDGSIGISPAATAAWRAHAVTQGSTPQVGRADAYLQAASRATRSGIEGVVPNV CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC WPINVFEPCWSLYTLHLAGLFAHPALDEAVRVIVAQLDARLGVRGLGPALHFAADADDTA CCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCHHHEEECCCCHHH VALCVLRLAGRDPAVDALRHFEIGELFVTFPGERNASVSTNIHALHALRLLGKPAAGTSA HHHHHHHHCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCE YVEANRNPHGLWDNEKWHVSWLYPTAHAVAALAQGKPQWRDERALAALLQAQRDDGGWGA EEECCCCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCC GRASTFEETAYALFALHVMDGSEEPTGRRRIAQAVARALEWMLARHAAPALPQMPLWIGK CCCCHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCC ELYCPIRVVRVAELAGLWLALRWGPRVPAEGAGAAP CCCCHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9655913; 12597275 [H]