Definition | Sinorhizobium fredii NGR234 plasmid pNGR234a, complete sequence. |
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Accession | NC_000914 |
Length | 536,165 |
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Identifier: 16519828
GI number: 16519828
Start: 366441
End: 367346
Strand: Direct
Name: Not Available
Synonym: NGR_a02770
Alternate gene names: NA
Gene position: 366441-367346 (Clockwise)
Preceding gene: 16519829
Following gene: 16519827
Centisome position: 68.34
GC content: 68.32
Gene sequence:
>906_bases ATGATCCCGACCGAACGCGGGCTGCAGCAGGTGCTGGAGTGGGGGCGTTCCCTGACCGGGTTCGCCGACGAGCATGCCGC GGAAGCCGTCAGGGGCGGCCAGTACATCCTGCAGCGCATCCACCCGAGCCTGCGCGACACCAGCGCCCGCACCGGTCGCG ATCCGCAGGACGAAACGCTGATCGTGGCATTCTATCGCGAACTGGCGCTGCTGTTCTGGCTCGACGATTGCAACGACCTT GACCTGATCGCGCCGGAGCAGCTCGCCGCGGTGGAGCAGGCGCTGGGGCAGGGCGTGCCGTGCGCGCTCCCCGGATTCGA GGGCTGCGCTGTGCTGCGCGCTTCGCTGGCCGCCCTCGCCTACGATCGTCGCGACTATGCTCAGCTTCTCGACGATACCC GGTGCTACTGCGCGGCGCTGCGCGCCGGACACGCGCAGGCGGCAGGGGCGGCGGAACGCTGGTCCTACGCCGAGTACCTG CACAACGGCATCGATTCGATCGCCTACGCAAACGTGTTCTGTTGCCTGTCGTTGCTGTGGGGGCTGGACATGGCGACCTT GCGCGCGCGTCCGGCGTTTCGCCAGGTCCTGCGGCTCATCTCGGCGATAGGGCGCCTGCAGAACGATCTGCATGGACGCG ACAAGGACAGGTCGGCCGGCGAGGCCGACAACGCGGCGATCCTGCTGCTGGAGCGCTATCCGGCTATGCCTGTGGTGGAG TTCCTCAACGACGAACTGGCCGGCCATACGCGCATGCTGCACCGGGTTATGGCGGAAGAACGGTTTCCCGCGCCGTGGGG GCCGTTGATCGAGGCCATGGCGGCCATCCGCGCGCACTATTACCAGACCTCGACCAGCCGCTACCGCAGCGACGCTGCGG GGGGAGGCCAGCATGCGCCCGCCTGA
Upstream 100 bases:
>100_bases ATTGCCCCATCCGGGTCGTGCGCGTGGCCGAACTCGCCGGGTTGTGGCTGGCGCTTCGTTGGGGGCCGCGCGTCCCGGCC GAGGGAGCAGGAGCGGCGCC
Downstream 100 bases:
>100_bases ACGCGCGGCAGGCGGCGGCGTGCGCGCGCTGCCTCGGTCCGATCCGACGCAAGGCCGTCGACCGATGCGACGGATGGAGC GAGCATGAGAGACACCGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MIPTERGLQQVLEWGRSLTGFADEHAAEAVRGGQYILQRIHPSLRDTSARTGRDPQDETLIVAFYRELALLFWLDDCNDL DLIAPEQLAAVEQALGQGVPCALPGFEGCAVLRASLAALAYDRRDYAQLLDDTRCYCAALRAGHAQAAGAAERWSYAEYL HNGIDSIAYANVFCCLSLLWGLDMATLRARPAFRQVLRLISAIGRLQNDLHGRDKDRSAGEADNAAILLLERYPAMPVVE FLNDELAGHTRMLHRVMAEERFPAPWGPLIEAMAAIRAHYYQTSTSRYRSDAAGGGQHAPA
Sequences:
>Translated_301_residues MIPTERGLQQVLEWGRSLTGFADEHAAEAVRGGQYILQRIHPSLRDTSARTGRDPQDETLIVAFYRELALLFWLDDCNDL DLIAPEQLAAVEQALGQGVPCALPGFEGCAVLRASLAALAYDRRDYAQLLDDTRCYCAALRAGHAQAAGAAERWSYAEYL HNGIDSIAYANVFCCLSLLWGLDMATLRARPAFRQVLRLISAIGRLQNDLHGRDKDRSAGEADNAAILLLERYPAMPVVE FLNDELAGHTRMLHRVMAEERFPAPWGPLIEAMAAIRAHYYQTSTSRYRSDAAGGGQHAPA >Mature_301_residues MIPTERGLQQVLEWGRSLTGFADEHAAEAVRGGQYILQRIHPSLRDTSARTGRDPQDETLIVAFYRELALLFWLDDCNDL DLIAPEQLAAVEQALGQGVPCALPGFEGCAVLRASLAALAYDRRDYAQLLDDTRCYCAALRAGHAQAAGAAERWSYAEYL HNGIDSIAYANVFCCLSLLWGLDMATLRARPAFRQVLRLISAIGRLQNDLHGRDKDRSAGEADNAAILLLERYPAMPVVE FLNDELAGHTRMLHRVMAEERFPAPWGPLIEAMAAIRAHYYQTSTSRYRSDAAGGGQHAPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y4KS_RHISN (P55537)
Other databases:
- EMBL: U00090 - PIR: T10873 - RefSeq: NP_443948.1 - ProteinModelPortal: P55537 - GeneID: 962505 - GenomeReviews: U00090_GR - KEGG: rhi:NGR_a02770 - HOGENOM: HBG655928 - ProtClustDB: CLSK506594 - InterPro: IPR008949 - Gene3D: G3DSA:1.10.600.10
Pfam domain/function: SSF48576 Terpenoid_synth
EC number: NA
Molecular weight: Translated: 33239; Mature: 33239
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPTERGLQQVLEWGRSLTGFADEHAAEAVRGGQYILQRIHPSLRDTSARTGRDPQDETL CCCCHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCCHH IVAFYRELALLFWLDDCNDLDLIAPEQLAAVEQALGQGVPCALPGFEGCAVLRASLAALA HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH YDRRDYAQLLDDTRCYCAALRAGHAQAAGAAERWSYAEYLHNGIDSIAYANVFCCLSLLW HHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLDMATLRARPAFRQVLRLISAIGRLQNDLHGRDKDRSAGEADNAAILLLERYPAMPVVE CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCHHHH FLNDELAGHTRMLHRVMAEERFPAPWGPLIEAMAAIRAHYYQTSTSRYRSDAAGGGQHAP HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC A C >Mature Secondary Structure MIPTERGLQQVLEWGRSLTGFADEHAAEAVRGGQYILQRIHPSLRDTSARTGRDPQDETL CCCCHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCCHH IVAFYRELALLFWLDDCNDLDLIAPEQLAAVEQALGQGVPCALPGFEGCAVLRASLAALA HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH YDRRDYAQLLDDTRCYCAALRAGHAQAAGAAERWSYAEYLHNGIDSIAYANVFCCLSLLW HHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLDMATLRARPAFRQVLRLISAIGRLQNDLHGRDKDRSAGEADNAAILLLERYPAMPVVE CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCHHHH FLNDELAGHTRMLHRVMAEERFPAPWGPLIEAMAAIRAHYYQTSTSRYRSDAAGGGQHAP HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC A C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424