Definition Sinorhizobium fredii NGR234 plasmid pNGR234a, complete sequence.
Accession NC_000914
Length 536,165

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Identifier: 16519829

GI number: 16519829

Start: 364894

End: 366444

Strand: Direct

Name: Not Available

Synonym: NGR_a02760

Alternate gene names: NA

Gene position: 364894-366444 (Clockwise)

Preceding gene: 16519830

Following gene: 16519828

Centisome position: 68.06

GC content: 69.37

Gene sequence:

>1551_bases
GTGAATGCGCTGTCCGAACAGATCCTTTTCGAATTGCGCCACCTGCTGAGCGAGATGAGCGACGGCGGCAGCGTCGGTCC
GTCCGTCTACGACACGGCGCGGGCTCTGCAGTTTGGCGGCAACGTCACCGGTCGGCAGGACGCATACGCGTGGCTCCTCG
CGCAGCAACAGGCCGATGGCGGATGGGGAAGCGCGGACTTCCCGCTGTTCCGCCATGCGCCCACGTGGGCGGCGTTGCTG
GCATTGCAGCGTGCCGATCCTCTTCCCGGCGCTGCCGACGCAGTCCAGGCTGCAACCCGGTTCCTCGAGCGCCAGGCCGA
TCCCTACGCGCATGCGGTGCCGGAAGACGCGCCGATCGGCGCGGAGCTGATCCTGCCGCAGTTGTGCGGCGAGGCCGCAT
CCTTGTTGGGCGGCGTGGCGTTTCCGCGCCACCCCGCGCTGTTGCCGTTGCGGCAAGCGTGCTTGGTCAAGCTGGGGGCG
GTGGCGACGTTGCCGAGCGGCCATCCGTTGCTGCACTCCTGGGAGGCCTGGGGGACGTGGCCAACCGCCGCATGCCCGGA
TGACGACGGCAGCATCGGCATCAGTCCGGCGGCCACCGCTGCGTGGCGTGCGCACGCCGTGACACAGGGGAGCACGCCGC
AGGTCGGGCGCGCCGACGCGTATCTGCAGGCGGCATCGCGGGCGACGCGCAGCGGCATCGAAGGTGTCGTTCCCAACGTC
TGGCCGATCAATGTGTTCGAGCCATGCTGGTCGCTGTACACTCTACATTTGGCCGGGCTGTTCGCGCATCCCGCGCTCGA
CGAGGCGGTGCGCGTGATCGTCGCGCAGCTCGACGCCCGCCTGGGCGTGCGCGGTCTGGGCCCGGCCTTGCACTTCGCGG
CTGATGCGGACGACACCGCCGTTGCCTTGTGCGTCCTGCGCCTTGCAGGCCGCGACCCGGCGGTCGATGCGTTGCGCCAT
TTCGAAATCGGCGAGCTGTTCGTCACCTTCCCCGGCGAGCGCAACGCCTCGGTGTCGACCAACATCCATGCCCTGCATGC
GTTGCGACTATTGGGAAAGCCTGCCGCTGGCACCAGCGCCTACGTCGAGGCCAATCGCAACCCTCACGGTCTATGGGACA
ATGAAAAATGGCACGTTTCGTGGCTGTATCCCACCGCGCATGCCGTCGCTGCGCTGGCGCAAGGCAAGCCCCAGTGGCGC
GACGAGCGCGCGCTGGCGGCGCTGCTGCAGGCGCAGCGCGACGACGGCGGCTGGGGCGCCGGTCGCGCGTCCACATTCGA
GGAAACCGCCTATGCGCTGTTCGCGTTGCACGTGATGGACGGGAGCGAAGAGCCGACAGGGCGCCGGCGCATCGCGCAGG
CGGTGGCGCGTGCGCTGGAGTGGATGCTCGCCCGCCATGCGGCGCCTGCATTGCCGCAGATGCCGCTGTGGATCGGCAAG
GAACTGTATTGCCCCATCCGGGTCGTGCGCGTGGCCGAACTCGCCGGGTTGTGGCTGGCGCTTCGTTGGGGGCCGCGCGT
CCCGGCCGAGGGAGCAGGAGCGGCGCCATGA

Upstream 100 bases:

>100_bases
GGCGCTGCCCATGCGGCGGGCCGCAACGGGCCTGCGGCGACGTGCGCGCCGTCTGCCCGATCCTGGTTCTCGTCAACCGT
CTGCAGAAGGAACATCCCCC

Downstream 100 bases:

>100_bases
TCCCGACCGAACGCGGGCTGCAGCAGGTGCTGGAGTGGGGGCGTTCCCTGACCGGGTTCGCCGACGAGCATGCCGCGGAA
GCCGTCAGGGGCGGCCAGTA

Product: hypothetical protein

Products: NA

Alternate protein names: ORF7 [H]

Number of amino acids: Translated: 516; Mature: 516

Protein sequence:

>516_residues
MNALSEQILFELRHLLSEMSDGGSVGPSVYDTARALQFGGNVTGRQDAYAWLLAQQQADGGWGSADFPLFRHAPTWAALL
ALQRADPLPGAADAVQAATRFLERQADPYAHAVPEDAPIGAELILPQLCGEAASLLGGVAFPRHPALLPLRQACLVKLGA
VATLPSGHPLLHSWEAWGTWPTAACPDDDGSIGISPAATAAWRAHAVTQGSTPQVGRADAYLQAASRATRSGIEGVVPNV
WPINVFEPCWSLYTLHLAGLFAHPALDEAVRVIVAQLDARLGVRGLGPALHFAADADDTAVALCVLRLAGRDPAVDALRH
FEIGELFVTFPGERNASVSTNIHALHALRLLGKPAAGTSAYVEANRNPHGLWDNEKWHVSWLYPTAHAVAALAQGKPQWR
DERALAALLQAQRDDGGWGAGRASTFEETAYALFALHVMDGSEEPTGRRRIAQAVARALEWMLARHAAPALPQMPLWIGK
ELYCPIRVVRVAELAGLWLALRWGPRVPAEGAGAAP

Sequences:

>Translated_516_residues
MNALSEQILFELRHLLSEMSDGGSVGPSVYDTARALQFGGNVTGRQDAYAWLLAQQQADGGWGSADFPLFRHAPTWAALL
ALQRADPLPGAADAVQAATRFLERQADPYAHAVPEDAPIGAELILPQLCGEAASLLGGVAFPRHPALLPLRQACLVKLGA
VATLPSGHPLLHSWEAWGTWPTAACPDDDGSIGISPAATAAWRAHAVTQGSTPQVGRADAYLQAASRATRSGIEGVVPNV
WPINVFEPCWSLYTLHLAGLFAHPALDEAVRVIVAQLDARLGVRGLGPALHFAADADDTAVALCVLRLAGRDPAVDALRH
FEIGELFVTFPGERNASVSTNIHALHALRLLGKPAAGTSAYVEANRNPHGLWDNEKWHVSWLYPTAHAVAALAQGKPQWR
DERALAALLQAQRDDGGWGAGRASTFEETAYALFALHVMDGSEEPTGRRRIAQAVARALEWMLARHAAPALPQMPLWIGK
ELYCPIRVVRVAELAGLWLALRWGPRVPAEGAGAAP
>Mature_516_residues
MNALSEQILFELRHLLSEMSDGGSVGPSVYDTARALQFGGNVTGRQDAYAWLLAQQQADGGWGSADFPLFRHAPTWAALL
ALQRADPLPGAADAVQAATRFLERQADPYAHAVPEDAPIGAELILPQLCGEAASLLGGVAFPRHPALLPLRQACLVKLGA
VATLPSGHPLLHSWEAWGTWPTAACPDDDGSIGISPAATAAWRAHAVTQGSTPQVGRADAYLQAASRATRSGIEGVVPNV
WPINVFEPCWSLYTLHLAGLFAHPALDEAVRVIVAQLDARLGVRGLGPALHFAADADDTAVALCVLRLAGRDPAVDALRH
FEIGELFVTFPGERNASVSTNIHALHALRLLGKPAAGTSAYVEANRNPHGLWDNEKWHVSWLYPTAHAVAALAQGKPQWR
DERALAALLQAQRDDGGWGAGRASTFEETAYALFALHVMDGSEEPTGRRRIAQAVARALEWMLARHAAPALPQMPLWIGK
ELYCPIRVVRVAELAGLWLALRWGPRVPAEGAGAAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PFTB repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008930 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55109; Mature: 55109

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNALSEQILFELRHLLSEMSDGGSVGPSVYDTARALQFGGNVTGRQDAYAWLLAQQQADG
CCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCC
GWGSADFPLFRHAPTWAALLALQRADPLPGAADAVQAATRFLERQADPYAHAVPEDAPIG
CCCCCCCCHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHCCCCCCCCC
AELILPQLCGEAASLLGGVAFPRHPALLPLRQACLVKLGAVATLPSGHPLLHSWEAWGTW
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCC
PTAACPDDDGSIGISPAATAAWRAHAVTQGSTPQVGRADAYLQAASRATRSGIEGVVPNV
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
WPINVFEPCWSLYTLHLAGLFAHPALDEAVRVIVAQLDARLGVRGLGPALHFAADADDTA
CCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCHHHEEECCCCHHH
VALCVLRLAGRDPAVDALRHFEIGELFVTFPGERNASVSTNIHALHALRLLGKPAAGTSA
HHHHHHHHCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCE
YVEANRNPHGLWDNEKWHVSWLYPTAHAVAALAQGKPQWRDERALAALLQAQRDDGGWGA
EEECCCCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCC
GRASTFEETAYALFALHVMDGSEEPTGRRRIAQAVARALEWMLARHAAPALPQMPLWIGK
CCCCHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCC
ELYCPIRVVRVAELAGLWLALRWGPRVPAEGAGAAP
CCCCHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MNALSEQILFELRHLLSEMSDGGSVGPSVYDTARALQFGGNVTGRQDAYAWLLAQQQADG
CCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCC
GWGSADFPLFRHAPTWAALLALQRADPLPGAADAVQAATRFLERQADPYAHAVPEDAPIG
CCCCCCCCHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHCCCCCCCCC
AELILPQLCGEAASLLGGVAFPRHPALLPLRQACLVKLGAVATLPSGHPLLHSWEAWGTW
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCC
PTAACPDDDGSIGISPAATAAWRAHAVTQGSTPQVGRADAYLQAASRATRSGIEGVVPNV
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
WPINVFEPCWSLYTLHLAGLFAHPALDEAVRVIVAQLDARLGVRGLGPALHFAADADDTA
CCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCHHHEEECCCCHHH
VALCVLRLAGRDPAVDALRHFEIGELFVTFPGERNASVSTNIHALHALRLLGKPAAGTSA
HHHHHHHHCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCE
YVEANRNPHGLWDNEKWHVSWLYPTAHAVAALAQGKPQWRDERALAALLQAQRDDGGWGA
EEECCCCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCC
GRASTFEETAYALFALHVMDGSEEPTGRRRIAQAVARALEWMLARHAAPALPQMPLWIGK
CCCCHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCC
ELYCPIRVVRVAELAGLWLALRWGPRVPAEGAGAAP
CCCCHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9655913; 12597275 [H]