Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 16519802

GI number: 16519802

Start: 393433

End: 394095

Strand: Reverse

Name: Not Available

Synonym: NGR_a03030

Alternate gene names: NA

Gene position: 394095-393433 (Counterclockwise)

Preceding gene: 16519801

Following gene: 16519807

Centisome position: 73.5

GC content: 58.82

Gene sequence:

>663_bases
GTGCAGGGCCAGGATCTCGCGATGCTTCCGGAAATCAGGCTGATGGGTGACGTCGATGTAGCCGCGCTGTCGCCACTGTT
TCGTGGCATGGTCATGACTGTTTCCTACGCCGAGACCCAAGGAGGGATCGGTCTGACCGCGTCGGGGGCGATGAACCGCA
AGTTCGTCCACTGGGCCGCTGTTCACTTCGATTGGCCCGGCCACACGTCGGACGACTTGTACAGCGTCAGCAAGGTTCTG
AACGAAGCCGATATGCCGCCGCTTTTGGTCGTCCGCGACATGCTCAAGCACTTGCGGCTTCTTCGGCGGCGAAAGGACGT
ACTGGTACCAACCCAACGCGGCCGAGACTTTCTGGTGAGACCGCAGGCCTTCTTCGATCTGATCGCGACGGATTATCTTT
ATGCTTATATCCACTACGGGCAGACGCGGGAGGCTGTCCGCAATCGGATGCGTTGGTGGCACGTCTTTCTCAATCTTATC
AACATGAAAGCAGAAACGGGCTGTTCGTTGGACGACCTGGCGAACGAGCTATACCCGAGCGAATCGTACCCGGAGCCAGC
AGAAATGACTGTCGAAACCTGGGCGGAAAGGTCGGCGCTCCGCTACGATTCATTCGCCCGCTGTGCTGGTTGGGATTGCT
GCACGAAGAGCGCGAGGGGCTGA

Upstream 100 bases:

>100_bases
TTGCAAGGGAAGGGAGGGGGCGGGTGAAGGGCACCCCTTCGGCTTTAGCTTTCTCGGTTTCAATTATTGCGTTCCTGGTA
GATGTTGCAGGCAGCTGAAT

Downstream 100 bases:

>100_bases
CCATTTGGCAGGGCGGAACCTACCACAAGACACCCTTGTGGGCTGCCTGTTTAAAGCTGGAATCAGACAGGCAATCCGAG
TTTATCCTCCATTGAACTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MQGQDLAMLPEIRLMGDVDVAALSPLFRGMVMTVSYAETQGGIGLTASGAMNRKFVHWAAVHFDWPGHTSDDLYSVSKVL
NEADMPPLLVVRDMLKHLRLLRRRKDVLVPTQRGRDFLVRPQAFFDLIATDYLYAYIHYGQTREAVRNRMRWWHVFLNLI
NMKAETGCSLDDLANELYPSESYPEPAEMTVETWAERSALRYDSFARCAGWDCCTKSARG

Sequences:

>Translated_220_residues
MQGQDLAMLPEIRLMGDVDVAALSPLFRGMVMTVSYAETQGGIGLTASGAMNRKFVHWAAVHFDWPGHTSDDLYSVSKVL
NEADMPPLLVVRDMLKHLRLLRRRKDVLVPTQRGRDFLVRPQAFFDLIATDYLYAYIHYGQTREAVRNRMRWWHVFLNLI
NMKAETGCSLDDLANELYPSESYPEPAEMTVETWAERSALRYDSFARCAGWDCCTKSARG
>Mature_220_residues
MQGQDLAMLPEIRLMGDVDVAALSPLFRGMVMTVSYAETQGGIGLTASGAMNRKFVHWAAVHFDWPGHTSDDLYSVSKVL
NEADMPPLLVVRDMLKHLRLLRRRKDVLVPTQRGRDFLVRPQAFFDLIATDYLYAYIHYGQTREAVRNRMRWWHVFLNLI
NMKAETGCSLDDLANELYPSESYPEPAEMTVETWAERSALRYDSFARCAGWDCCTKSARG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4JL_RHISN (P55512)

Other databases:

- EMBL:   U00090
- PIR:   T28639
- RefSeq:   NP_443922.1
- GeneID:   962555
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a03030
- HOGENOM:   HBG653712
- ProtClustDB:   CLSK861914

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25142; Mature: 25142

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGQDLAMLPEIRLMGDVDVAALSPLFRGMVMTVSYAETQGGIGLTASGAMNRKFVHWAA
CCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHEEEEHHCCCCCCEEECCCCCCEEEEEEE
VHFDWPGHTSDDLYSVSKVLNEADMPPLLVVRDMLKHLRLLRRRKDVLVPTQRGRDFLVR
EEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEC
PQAFFDLIATDYLYAYIHYGQTREAVRNRMRWWHVFLNLINMKAETGCSLDDLANELYPS
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCC
ESYPEPAEMTVETWAERSALRYDSFARCAGWDCCTKSARG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCC
>Mature Secondary Structure
MQGQDLAMLPEIRLMGDVDVAALSPLFRGMVMTVSYAETQGGIGLTASGAMNRKFVHWAA
CCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHEEEEHHCCCCCCEEECCCCCCEEEEEEE
VHFDWPGHTSDDLYSVSKVLNEADMPPLLVVRDMLKHLRLLRRRKDVLVPTQRGRDFLVR
EEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEC
PQAFFDLIATDYLYAYIHYGQTREAVRNRMRWWHVFLNLINMKAETGCSLDDLANELYPS
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCC
ESYPEPAEMTVETWAERSALRYDSFARCAGWDCCTKSARG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424