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The map label for this gene is stbB

Identifier: 16519801

GI number: 16519801

Start: 394378

End: 394800

Strand: Reverse

Name: stbB

Synonym: NGR_a03040

Alternate gene names: NA

Gene position: 394800-394378 (Counterclockwise)

Preceding gene: 16519800

Following gene: 16519802

Centisome position: 73.63

GC content: 59.1

Gene sequence:

>423_bases
ATGATCGTGCTCGACACCAACGTCATATCCGAATTGTGGAAGGCCGAGCCGGACCGCGCTGTGTTGGCCTGGATCGATGC
GCAGATGATTGAAACACTGTATTTGTCCGCGATTACGGTGGCCGAACTGCGTTTCGGCTTGGCGGCCATGCCGGCAGGCA
AGCGACGCACGATCTTTCAGAATCGCTTGGAAGGAGAGGTCTTGCCGGCCCTCGCAGGGCGCGTTCTTCCCTTCGACTTG
GACGCGTCGCGAAGTTATGCGGACCTGATGGCGCAAGCGAAAACGTCAGGCAAGGTCATCGGCAAGGCGGATGGCTATAT
CGCCGCAACGGCGGTTGCGCATGGCTTTATGGTTGCTACGCGCGATACCAGTCCGTTCGAGGCAGCTGGACTAGACATCA
TCAACCCCTGGGAGCCGGCATGA

Upstream 100 bases:

>100_bases
TGGCGTCTATTGCCCATGAAGCTGGAGGGCTGACGGATGCCGAAGCGGAGCATTTCAACCAGCTCCGTGACAAGACTCCT
GCTGAACCGATGAGCTTCGA

Downstream 100 bases:

>100_bases
TCCCGCCGATCTCATTTCTCTATGCGGTATGTTAAACCATAATGTGGCGGCCAGGTTGAACTGTCCGCCGTTGGGCAAAG
TTAAAATGTCACTTTGGATA

Product: plasmid stability protein StbB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MIVLDTNVISELWKAEPDRAVLAWIDAQMIETLYLSAITVAELRFGLAAMPAGKRRTIFQNRLEGEVLPALAGRVLPFDL
DASRSYADLMAQAKTSGKVIGKADGYIAATAVAHGFMVATRDTSPFEAAGLDIINPWEPA

Sequences:

>Translated_140_residues
MIVLDTNVISELWKAEPDRAVLAWIDAQMIETLYLSAITVAELRFGLAAMPAGKRRTIFQNRLEGEVLPALAGRVLPFDL
DASRSYADLMAQAKTSGKVIGKADGYIAATAVAHGFMVATRDTSPFEAAGLDIINPWEPA
>Mature_140_residues
MIVLDTNVISELWKAEPDRAVLAWIDAQMIETLYLSAITVAELRFGLAAMPAGKRRTIFQNRLEGEVLPALAGRVLPFDL
DASRSYADLMAQAKTSGKVIGKADGYIAATAVAHGFMVATRDTSPFEAAGLDIINPWEPA

Specific function: Involved in plasmid stability (Potential)

COG id: COG1487

COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4JK_RHISN (P55511)

Other databases:

- EMBL:   U00090
- PIR:   T28638
- RefSeq:   NP_443921.1
- ProteinModelPortal:   P55511
- SMR:   P55511
- GeneID:   962554
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a03040
- HOGENOM:   HBG705734
- InterPro:   IPR002716

Pfam domain/function: PF01850 PIN

EC number: NA

Molecular weight: Translated: 15120; Mature: 15120

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVLDTNVISELWKAEPDRAVLAWIDAQMIETLYLSAITVAELRFGLAAMPAGKRRTIFQ
CEEECHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
NRLEGEVLPALAGRVLPFDLDASRSYADLMAQAKTSGKVIGKADGYIAATAVAHGFMVAT
HHCCCCHHHHHCCCCCEECCCCCCHHHHHHHHHHCCCCEEECCCCEEHHHHHHCCEEEEE
RDTSPFEAAGLDIINPWEPA
CCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIVLDTNVISELWKAEPDRAVLAWIDAQMIETLYLSAITVAELRFGLAAMPAGKRRTIFQ
CEEECHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
NRLEGEVLPALAGRVLPFDLDASRSYADLMAQAKTSGKVIGKADGYIAATAVAHGFMVAT
HHCCCCHHHHHCCCCCEECCCCCCHHHHHHHHHHCCCCEEECCCCEEHHHHHHCCEEEEE
RDTSPFEAAGLDIINPWEPA
CCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424