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Identifier: 16519769

GI number: 16519769

Start: 428844

End: 430055

Strand: Reverse

Name: Not Available

Synonym: NGR_a03370

Alternate gene names: 16519769

Gene position: 430055-428844 (Counterclockwise)

Preceding gene: 16519768

Following gene: 16519770

Centisome position: 80.21

GC content: 57.84

Gene sequence:

>1212_bases
ATGGTCTTCACTGGAAAATGTGATCTGCGGAGTCCGCTGCTCGGACGACGCCTGCGCTTAGGATTCATCGGCGGCGGAAA
GGGGGGGCTTGTTGGACGATGGCATTTCGCTGGGGCCCGGCTGTCGAACCACTGGGAAATTGTTGCGGGAGCTCTTTCTT
CGGACCCGGAAAACGCGCACGCTTCGGCTGCAGAGTGGATGATAGCGCCGGACCGGTCGTACAGCGACTGGAACGCTATG
GCAACAGCAGAAGCCGCAAGGGACGATGGTATAGAGGCAGTCTCGATCGTGACGCCAAACTGGACACACCATCGGATCGC
GACGGCATTTCTGAAGGCCGGCATTGATGTAATACTAGACAAGCCTATGACCACAACAGTTTCCGACGCCCGAGAACTCG
TGGAGTTACAAAGAGCGACGGATCGCCTGGTCATCATGACTTACCCGTATGCACATCACGCGATGGTTCGCCAAGCTAAG
CACATGATCCGAAATGGGGCCGTCGGCACGGTCCGGCAGGCCCATGTGGAGTATGTTCAGGAGTGGGCGACAGCGCCCTT
CTCGTCCGACGCGAAGGGGGCAATGTGGCGGCAAGATCCCGAGAAGGTGGGCCGCGCGTCGGCCACCGGAGATATCGGCA
CGCACGCTTATCATCTCCTTCACACACTGACCGGACAGGACATTGCCAGGCTCAGGGCTGAGTTTCACACCTGTGGCGCT
GTGAAGGCGATGGAAGACACCGCCTACGTCACTTTCCGTCTCGAGAATGGTGCACCTGGGATCCTTTGGGTAACGCAAGC
TGCTCCTGGCCAATATTGCGGTCTTCGAATTCGCGTGTGGGGCGACAGAGGCGGGCTTGAGTGGGATCAGGAAAAACCTG
AAGCGCTGCGCTATGTTCCTTTAGGGGAGCAGGAGCAGATTTTTGTGCGAGGCCACGGTAGTGGAATAGTACCCGAAGCA
GAACGCCTGATACATCTACCGCGGGGACATGGCGAAGCTTTAGTGGATGCATGGGCAAATCTCTATGCCGAGGCTGGCGT
GGCGGTAGCCGCACGCCGCGCAGGGTATGCTCTCCCGAAAGATAGCGTCGAGCTTTCCGGGGTTGAGGACGGGCTCAAAG
GTATGTTGTTCATCGATGCTTGTGCCGACAGCCACGAATCTGGCGGATCTTGGGTTTCGATAAACGGTGAATCCATTCCC
AACTTTTGCTGA

Upstream 100 bases:

>100_bases
CGGCCGCGAGGGCGTTTAACAGTGGGTGCTGTGCGAGGATCAGTCCCTTGCAATGGCTTGCCGCCGATAACGTTGTAGAA
AAATAGACAAGGAGTGCTCA

Downstream 100 bases:

>100_bases
GCTGTGGAGTGCGGCCCTTGGGGTGGACAGACCGGATGACGAATTGACCGGCCTACCGGGTTTTCGGAAAGAAGGCCCAT
GGCAAAACACCGAAGTCACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MVFTGKCDLRSPLLGRRLRLGFIGGGKGGLVGRWHFAGARLSNHWEIVAGALSSDPENAHASAAEWMIAPDRSYSDWNAM
ATAEAARDDGIEAVSIVTPNWTHHRIATAFLKAGIDVILDKPMTTTVSDARELVELQRATDRLVIMTYPYAHHAMVRQAK
HMIRNGAVGTVRQAHVEYVQEWATAPFSSDAKGAMWRQDPEKVGRASATGDIGTHAYHLLHTLTGQDIARLRAEFHTCGA
VKAMEDTAYVTFRLENGAPGILWVTQAAPGQYCGLRIRVWGDRGGLEWDQEKPEALRYVPLGEQEQIFVRGHGSGIVPEA
ERLIHLPRGHGEALVDAWANLYAEAGVAVAARRAGYALPKDSVELSGVEDGLKGMLFIDACADSHESGGSWVSINGESIP
NFC

Sequences:

>Translated_403_residues
MVFTGKCDLRSPLLGRRLRLGFIGGGKGGLVGRWHFAGARLSNHWEIVAGALSSDPENAHASAAEWMIAPDRSYSDWNAM
ATAEAARDDGIEAVSIVTPNWTHHRIATAFLKAGIDVILDKPMTTTVSDARELVELQRATDRLVIMTYPYAHHAMVRQAK
HMIRNGAVGTVRQAHVEYVQEWATAPFSSDAKGAMWRQDPEKVGRASATGDIGTHAYHLLHTLTGQDIARLRAEFHTCGA
VKAMEDTAYVTFRLENGAPGILWVTQAAPGQYCGLRIRVWGDRGGLEWDQEKPEALRYVPLGEQEQIFVRGHGSGIVPEA
ERLIHLPRGHGEALVDAWANLYAEAGVAVAARRAGYALPKDSVELSGVEDGLKGMLFIDACADSHESGGSWVSINGESIP
NFC
>Mature_403_residues
MVFTGKCDLRSPLLGRRLRLGFIGGGKGGLVGRWHFAGARLSNHWEIVAGALSSDPENAHASAAEWMIAPDRSYSDWNAM
ATAEAARDDGIEAVSIVTPNWTHHRIATAFLKAGIDVILDKPMTTTVSDARELVELQRATDRLVIMTYPYAHHAMVRQAK
HMIRNGAVGTVRQAHVEYVQEWATAPFSSDAKGAMWRQDPEKVGRASATGDIGTHAYHLLHTLTGQDIARLRAEFHTCGA
VKAMEDTAYVTFRLENGAPGILWVTQAAPGQYCGLRIRVWGDRGGLEWDQEKPEALRYVPLGEQEQIFVRGHGSGIVPEA
ERLIHLPRGHGEALVDAWANLYAEAGVAVAARRAGYALPKDSVELSGVEDGLKGMLFIDACADSHESGGSWVSINGESIP
NFC

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4HM_RHISN (P55480)

Other databases:

- EMBL:   U00090
- PIR:   T10847
- RefSeq:   NP_443889.1
- ProteinModelPortal:   P55480
- SMR:   P55480
- GeneID:   962320
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a03370
- HOGENOM:   HBG666152
- ProtClustDB:   CLSK2301969
- GO:   GO:0005488
- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104
- Gene3D:   G3DSA:3.40.50.720

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C

EC number: 1.-.-.- [C]

Molecular weight: Translated: 43879; Mature: 43879

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFTGKCDLRSPLLGRRLRLGFIGGGKGGLVGRWHFAGARLSNHWEIVAGALSSDPENAH
CEEECCCCCCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCCC
ASAAEWMIAPDRSYSDWNAMATAEAARDDGIEAVSIVTPNWTHHRIATAFLKAGIDVILD
CCCCCEEECCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEC
KPMTTTVSDARELVELQRATDRLVIMTYPYAHHAMVRQAKHMIRNGAVGTVRQAHVEYVQ
CCCCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
EWATAPFSSDAKGAMWRQDPEKVGRASATGDIGTHAYHLLHTLTGQDIARLRAEFHTCGA
HHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCC
VKAMEDTAYVTFRLENGAPGILWVTQAAPGQYCGLRIRVWGDRGGLEWDQEKPEALRYVP
EEEECCCEEEEEEECCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCEEECC
LGEQEQIFVRGHGSGIVPEAERLIHLPRGHGEALVDAWANLYAEAGVAVAARRAGYALPK
CCCCCEEEEEECCCCCCCCHHHEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCC
DSVELSGVEDGLKGMLFIDACADSHESGGSWVSINGESIPNFC
CCEEECCCCCCCCEEEEEEECCCCCCCCCCEEEECCCCCCCCC
>Mature Secondary Structure
MVFTGKCDLRSPLLGRRLRLGFIGGGKGGLVGRWHFAGARLSNHWEIVAGALSSDPENAH
CEEECCCCCCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCCC
ASAAEWMIAPDRSYSDWNAMATAEAARDDGIEAVSIVTPNWTHHRIATAFLKAGIDVILD
CCCCCEEECCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEC
KPMTTTVSDARELVELQRATDRLVIMTYPYAHHAMVRQAKHMIRNGAVGTVRQAHVEYVQ
CCCCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
EWATAPFSSDAKGAMWRQDPEKVGRASATGDIGTHAYHLLHTLTGQDIARLRAEFHTCGA
HHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCC
VKAMEDTAYVTFRLENGAPGILWVTQAAPGQYCGLRIRVWGDRGGLEWDQEKPEALRYVP
EEEECCCEEEEEEECCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCEEECC
LGEQEQIFVRGHGSGIVPEAERLIHLPRGHGEALVDAWANLYAEAGVAVAARRAGYALPK
CCCCCEEEEEECCCCCCCCHHHEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCC
DSVELSGVEDGLKGMLFIDACADSHESGGSWVSINGESIPNFC
CCEEECCCCCCCCEEEEEEECCCCCCCCCCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424