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Identifier: 16519770

GI number: 16519770

Start: 428063

End: 428497

Strand: Reverse

Name: Not Available

Synonym: NGR_a03360

Alternate gene names: NA

Gene position: 428497-428063 (Counterclockwise)

Preceding gene: 16519769

Following gene: 16519771

Centisome position: 79.92

GC content: 61.61

Gene sequence:

>435_bases
ATGGAGATTTTTGAAGGAGACAGCGGGTCTCGGGTGAGCCGTCTTGAGGTGATCAACACCGGACGGCGGCGTCGATTTAC
GGAAGATGAGAAGCTGCGGATTGTCGCAGAAAGCTTTGCCGGGAGAGGCCGTGCGTCGGCCACGGCCCGTCAGTACGGCA
TCAGTCGCTCCCTGTTGAACCGTTGGCGCAAATCGGTTCGCCAGGGTTTGCACGGCCAGAAACAAACCGATGGTTTTGTG
CCGGCGTTCGTCATGCCGGAAACTTTTGTGCCGGTGAAGCAGGTCACTCCACCTGCTGCGATGGAGCAGCCGGTGGCGTC
TCCTTCCGGCCGCATGGAGATTGTTGCGGCGAACGGCCGTCGTGTGGTCGTGGACGGCAGCGTCGACGTTGAGGCGCTGC
TGCGGATCATGCGGGGGCTGGAGACGTTGCGGTGA

Upstream 100 bases:

>100_bases
GCCAGATAAGGGGTATCCGTCCGAGCGCGACCGCCTTTGCATATTGAGTAAAACTGTTCAGACCCTGTCCTTATTCCCAT
GCATAAGGACAGTTGCCAAC

Downstream 100 bases:

>100_bases
TCATGCTTCCTTCCGGTCAAAATGTGCGGGTGTGGATTGCAACGGGCCATACGGACATGCGGTGTGGGTTTCCATCGCTT
GCGTTGCGGGTGCAGGAGGT

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MEIFEGDSGSRVSRLEVINTGRRRRFTEDEKLRIVAESFAGRGRASATARQYGISRSLLNRWRKSVRQGLHGQKQTDGFV
PAFVMPETFVPVKQVTPPAAMEQPVASPSGRMEIVAANGRRVVVDGSVDVEALLRIMRGLETLR

Sequences:

>Translated_144_residues
MEIFEGDSGSRVSRLEVINTGRRRRFTEDEKLRIVAESFAGRGRASATARQYGISRSLLNRWRKSVRQGLHGQKQTDGFV
PAFVMPETFVPVKQVTPPAAMEQPVASPSGRMEIVAANGRRVVVDGSVDVEALLRIMRGLETLR
>Mature_144_residues
MEIFEGDSGSRVSRLEVINTGRRRRFTEDEKLRIVAESFAGRGRASATARQYGISRSLLNRWRKSVRQGLHGQKQTDGFV
PAFVMPETFVPVKQVTPPAAMEQPVASPSGRMEIVAANGRRVVVDGSVDVEALLRIMRGLETLR

Specific function: Unknown

COG id: COG2963

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 8 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4HN_RHISN (P55481)

Other databases:

- EMBL:   U00090
- PIR:   T10848
- RefSeq:   NP_443890.1
- RefSeq:   YP_002826291.1
- ProteinModelPortal:   P55481
- SMR:   P55481
- GeneID:   7791053
- GeneID:   962632
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a03360
- HOGENOM:   HBG756815
- ProtClustDB:   CLSK563529
- InterPro:   IPR002514
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10

Pfam domain/function: PF01527 Transposase_8

EC number: NA

Molecular weight: Translated: 16011; Mature: 16011

Theoretical pI: Translated: 11.66; Mature: 11.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIFEGDSGSRVSRLEVINTGRRRRFTEDEKLRIVAESFAGRGRASATARQYGISRSLLN
CCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHH
RWRKSVRQGLHGQKQTDGFVPAFVMPETFVPVKQVTPPAAMEQPVASPSGRMEIVAANGR
HHHHHHHHCCCCCCCCCCCCCEEECCCCCCCHHHCCCCHHHHCCCCCCCCCEEEEEECCC
RVVVDGSVDVEALLRIMRGLETLR
EEEEECCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEIFEGDSGSRVSRLEVINTGRRRRFTEDEKLRIVAESFAGRGRASATARQYGISRSLLN
CCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHH
RWRKSVRQGLHGQKQTDGFVPAFVMPETFVPVKQVTPPAAMEQPVASPSGRMEIVAANGR
HHHHHHHHCCCCCCCCCCCCCEEECCCCCCCHHHCCCCHHHHCCCCCCCCCEEEEEECCC
RVVVDGSVDVEALLRIMRGLETLR
EEEEECCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424