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The map label for this gene is fixF

Identifier: 16519753

GI number: 16519753

Start: 449863

End: 451071

Strand: Reverse

Name: fixF

Synonym: NGR_a03530

Alternate gene names: 16519753

Gene position: 451071-449863 (Counterclockwise)

Preceding gene: 16519751

Following gene: 16519756

Centisome position: 84.13

GC content: 47.73

Gene sequence:

>1209_bases
ATGGATACAATGGCCAATTCAATATTAGGACAGGAAATCACTTTCCTCAAACTTGATACCCGAGTGATCAAAAATTTCGA
CAAGGTTCTTACGAATAATATTGAGGTTGTGGAAACGTCTCTGTGGTCTGTAGTAAGAAAGAACGCCTTAAAAAAGGGCG
CAGCAAAGGCACTGCAAGCCTGCGCGTCGTCAGTGCTGCACAAAAGATCGGACTATGAATTCTTGACCACCGGCAATGTG
CTGCGAAAAAAAATTCGCCTCCCGCGTTTGTTCGGCAATAAGGTAATTTCCGCGGCTTACTCGTGGATAAAACGCGTGCA
GGCAGCGCTTTTGCTCGATTATTTGAAAGAACATTTATCCCAGTATGACTGGGACCAGCTGATAGTTGTCGTGTTTAACG
GGTCGAATTATCCAGAAAGCGTGCTCGCCGAAGCATCGAAGGGATTTAAGCGCGTTTTTGTTGAGGATGGGTTTTTTCCT
GGGACGCTCCAAATCGACCCAGTAGGAATAAACGCTGCAAACTCCGTGCCTCGCTGTAGCGCTTTTTATAAAAGCGGCAG
GGATTTTTCGGAGGGAGGGTTACCAACAGCTGTGACCAATAGGTCATCAAAAAGAAAATTTACCCCTGTCGATCTGGCCC
CGGGCTTTGTCTTTGTACCGTTTCAGGTCCCTTCCGATATGCAGGTAACGCTTCATTCGCCTTGGGTGAAAGACATGTAC
AATTTTTACGATATCGTTGTTAACGCAGCTGAGCAAAATCCTGAGGAGATGTTTGTCATCAAGGAGCATCCTAGATTCAA
GAGATCGGTGATCGGCAGTCGTCCGCCACACCCGCGCGTGAAATTTGCAAACGGAAATATCACCTCCGAACTTATCTCCA
ATGCGAGGACTGTTGTCACGATAAATTCGACGGTAGGCATTGAGGCTCTGCTTTTGGGGAAGCAGGTTATTACGCTTGGC
GACTCCTGCTACAACATTCAGGATCTTGTGTTGAGAGGAAATGATATGGGCCGGCTCAACGCCGCACTTGCGCTTCGGGG
ATGGCTTCCCGACGATGAATTGCGGAGGCAGTTTCTCGGCTTCCTGTGGAATTACTACTTAGTTAAGGGTAGCTTTACAG
AACCACCAACCGCCCTGGCCTCTCGGATTCTCGATTGTTTCGAACTGGACTCAGAAGTGAGAGGTGCCATCGCAAATTTG
AACAATTGA

Upstream 100 bases:

>100_bases
GGTTCATGTTGGGCCGTATCTAAGCTGGTTAGCAAGTTCCGCATCTGGCGACGCAACGCAAAGTAAACATGCGCGCTACG
CAATATCAATCGAGTAATTG

Downstream 100 bases:

>100_bases
ATCCATCTCTGCAGAGTTCTCTGCGCCTCTTCAGGTTGTGAGTGTTTTACCTTATGGTGGTGGGCGGCCTCGGCTCCCGA
GGCCTCCTCCACCATCAGAC

Product: polysaccharide synthesis/modification protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 402

Protein sequence:

>402_residues
MDTMANSILGQEITFLKLDTRVIKNFDKVLTNNIEVVETSLWSVVRKNALKKGAAKALQACASSVLHKRSDYEFLTTGNV
LRKKIRLPRLFGNKVISAAYSWIKRVQAALLLDYLKEHLSQYDWDQLIVVVFNGSNYPESVLAEASKGFKRVFVEDGFFP
GTLQIDPVGINAANSVPRCSAFYKSGRDFSEGGLPTAVTNRSSKRKFTPVDLAPGFVFVPFQVPSDMQVTLHSPWVKDMY
NFYDIVVNAAEQNPEEMFVIKEHPRFKRSVIGSRPPHPRVKFANGNITSELISNARTVVTINSTVGIEALLLGKQVITLG
DSCYNIQDLVLRGNDMGRLNAALALRGWLPDDELRRQFLGFLWNYYLVKGSFTEPPTALASRILDCFELDSEVRGAIANL
NN

Sequences:

>Translated_402_residues
MDTMANSILGQEITFLKLDTRVIKNFDKVLTNNIEVVETSLWSVVRKNALKKGAAKALQACASSVLHKRSDYEFLTTGNV
LRKKIRLPRLFGNKVISAAYSWIKRVQAALLLDYLKEHLSQYDWDQLIVVVFNGSNYPESVLAEASKGFKRVFVEDGFFP
GTLQIDPVGINAANSVPRCSAFYKSGRDFSEGGLPTAVTNRSSKRKFTPVDLAPGFVFVPFQVPSDMQVTLHSPWVKDMY
NFYDIVVNAAEQNPEEMFVIKEHPRFKRSVIGSRPPHPRVKFANGNITSELISNARTVVTINSTVGIEALLLGKQVITLG
DSCYNIQDLVLRGNDMGRLNAALALRGWLPDDELRRQFLGFLWNYYLVKGSFTEPPTALASRILDCFELDSEVRGAIANL
NN
>Mature_402_residues
MDTMANSILGQEITFLKLDTRVIKNFDKVLTNNIEVVETSLWSVVRKNALKKGAAKALQACASSVLHKRSDYEFLTTGNV
LRKKIRLPRLFGNKVISAAYSWIKRVQAALLLDYLKEHLSQYDWDQLIVVVFNGSNYPESVLAEASKGFKRVFVEDGFFP
GTLQIDPVGINAANSVPRCSAFYKSGRDFSEGGLPTAVTNRSSKRKFTPVDLAPGFVFVPFQVPSDMQVTLHSPWVKDMY
NFYDIVVNAAEQNPEEMFVIKEHPRFKRSVIGSRPPHPRVKFANGNITSELISNARTVVTINSTVGIEALLLGKQVITLG
DSCYNIQDLVLRGNDMGRLNAALALRGWLPDDELRRQFLGFLWNYYLVKGSFTEPPTALASRILDCFELDSEVRGAIANL
NN

Specific function: Unknown

COG id: COG3562

COG function: function code M; Capsule polysaccharide export protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): FIXF_RHISN (P55467)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_443873.1
- GeneID:   962548
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a03530
- ProtClustDB:   CLSK516085
- InterPro:   IPR007833

Pfam domain/function: PF05159 Capsule_synth

EC number: NA

Molecular weight: Translated: 44990; Mature: 44990

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTMANSILGQEITFLKLDTRVIKNFDKVLTNNIEVVETSLWSVVRKNALKKGAAKALQA
CCCHHHHHHCCCEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
CASSVLHKRSDYEFLTTGNVLRKKIRLPRLFGNKVISAAYSWIKRVQAALLLDYLKEHLS
HHHHHHHCCCCCCEEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QYDWDQLIVVVFNGSNYPESVLAEASKGFKRVFVEDGFFPGTLQIDPVGINAANSVPRCS
HCCCCEEEEEEECCCCCCHHHHHHHHCCHHEEEEECCCCCCEEEECCCCCCCCCCCCHHH
AFYKSGRDFSEGGLPTAVTNRSSKRKFTPVDLAPGFVFVPFQVPSDMQVTLHSPWVKDMY
HHHHCCCCCCCCCCCCEECCCCCCCCCCCEECCCCEEEEEEECCCCCEEEECCCHHHHHH
NFYDIVVNAAEQNPEEMFVIKEHPRFKRSVIGSRPPHPRVKFANGNITSELISNARTVVT
HHHHHHHHHCCCCCCCEEEECCCCCHHHHHCCCCCCCCCEEEECCCCHHHHHCCCCEEEE
INSTVGIEALLLGKQVITLGDSCYNIQDLVLRGNDMGRLNAALALRGWLPDDELRRQFLG
EECCCCHHHHHHCCHHEECCCCCCCHHHHEEECCCCCHHHHHHEEECCCCCHHHHHHHHH
FLWNYYLVKGSFTEPPTALASRILDCFELDSEVRGAIANLNN
HHHHHHEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCC
>Mature Secondary Structure
MDTMANSILGQEITFLKLDTRVIKNFDKVLTNNIEVVETSLWSVVRKNALKKGAAKALQA
CCCHHHHHHCCCEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
CASSVLHKRSDYEFLTTGNVLRKKIRLPRLFGNKVISAAYSWIKRVQAALLLDYLKEHLS
HHHHHHHCCCCCCEEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QYDWDQLIVVVFNGSNYPESVLAEASKGFKRVFVEDGFFPGTLQIDPVGINAANSVPRCS
HCCCCEEEEEEECCCCCCHHHHHHHHCCHHEEEEECCCCCCEEEECCCCCCCCCCCCHHH
AFYKSGRDFSEGGLPTAVTNRSSKRKFTPVDLAPGFVFVPFQVPSDMQVTLHSPWVKDMY
HHHHCCCCCCCCCCCCEECCCCCCCCCCCEECCCCEEEEEEECCCCCEEEECCCHHHHHH
NFYDIVVNAAEQNPEEMFVIKEHPRFKRSVIGSRPPHPRVKFANGNITSELISNARTVVT
HHHHHHHHHCCCCCCCEEEECCCCCHHHHHCCCCCCCCCEEEECCCCHHHHHCCCCEEEE
INSTVGIEALLLGKQVITLGDSCYNIQDLVLRGNDMGRLNAALALRGWLPDDELRRQFLG
EECCCCHHHHHHCCHHEECCCCCCCHHHHEEECCCCCHHHHHHEEECCCCCHHHHHHHHH
FLWNYYLVKGSFTEPPTALASRILDCFELDSEVRGAIANLNN
HHHHHHEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424