| Definition | Sinorhizobium fredii NGR234 plasmid pNGR234a, complete sequence. |
|---|---|
| Accession | NC_000914 |
| Length | 536,165 |
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Identifier: 16519713
GI number: 16519713
Start: 508575
End: 509153
Strand: Reverse
Name: Not Available
Synonym: NGR_a03930
Alternate gene names: NA
Gene position: 509153-508575 (Counterclockwise)
Preceding gene: 16519712
Following gene: 16519717
Centisome position: 94.96
GC content: 63.73
Gene sequence:
>579_bases ATGGCTGCTCACCTTTGCCGAGGACGCGGAGCCGTCGGCCGGCGCGAAATGTTGCGGGGTTCCGGCAAGAAGCCGATCCA ACGCCTGGCGAAGGCGCCAGCCGCGACAGCCTCATCGAAGACATCGGAATGGCGCGCCACCACCGCTTATGGGTTCCTCC CGGCCGGAGGGGACGTCCGGCCTCACTCGCCCCGGTACGAATCTCAGGGTGTGCTATCTGACCCGGCTGATCTCGGTGAG CGATTTGCGGCGCGCGATGAACTCGCGGAGGAGGGGAAGGAAGAACGCTTTGCTGAACCGCCCGATCGGCGGCTCGGGCT CGATGTAAAAGGAGCGGCCAACGATATAGGTGTTGAATTCATCGAAGATGATCCAGAGGCGCAGGTCTGCATCGAGGCCG GCCCGCCGCTTCTCGATGGCCGGAATTTCAGCCGCGCAGCGAGCCTGCTCGGGCTGCTTGGTGGTGATCGGGAAAAACAG AACCAGGTCGTCATCAGGTCGGGCAAGCCTCACGCCGACGGCGACTGGCCGATACTTCCGCCGCTCTATCTCTCCTTTTC GGGCTTGCCGCGCGCATAA
Upstream 100 bases:
>100_bases TACATCCGCGCCGGTTCCAGATCCGGAAGGACACTTGGATTTAGATGAAGAACGGAATCTTGATGGCGAGCTTTAGACCG AGCTTTCCCTTCCGGAAGGA
Downstream 100 bases:
>100_bases ATAGGGATAACGGATGACCGTCGCGGTCTGGATGCCATTATAGCTGCTCATCGATTGGTCTCGTCGGTTTCCCCATAGGC GTCCACCGCCGCCTCGAATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 191
Protein sequence:
>192_residues MAAHLCRGRGAVGRREMLRGSGKKPIQRLAKAPAATASSKTSEWRATTAYGFLPAGGDVRPHSPRYESQGVLSDPADLGE RFAARDELAEEGKEERFAEPPDRRLGLDVKGAANDIGVEFIEDDPEAQVCIEAGPPLLDGRNFSRAASLLGLLGGDREKQ NQVVIRSGKPHADGDWPILPPLYLSFSGLPRA
Sequences:
>Translated_192_residues MAAHLCRGRGAVGRREMLRGSGKKPIQRLAKAPAATASSKTSEWRATTAYGFLPAGGDVRPHSPRYESQGVLSDPADLGE RFAARDELAEEGKEERFAEPPDRRLGLDVKGAANDIGVEFIEDDPEAQVCIEAGPPLLDGRNFSRAASLLGLLGGDREKQ NQVVIRSGKPHADGDWPILPPLYLSFSGLPRA >Mature_191_residues AAHLCRGRGAVGRREMLRGSGKKPIQRLAKAPAATASSKTSEWRATTAYGFLPAGGDVRPHSPRYESQGVLSDPADLGER FAARDELAEEGKEERFAEPPDRRLGLDVKGAANDIGVEFIEDDPEAQVCIEAGPPLLDGRNFSRAASLLGLLGGDREKQN QVVIRSGKPHADGDWPILPPLYLSFSGLPRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y4DX_RHISN (P55423)
Other databases:
- EMBL: U00090 - RefSeq: NP_443833.1 - GeneID: 962283 - GenomeReviews: U00090_GR - KEGG: rhi:NGR_a03930
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20638; Mature: 20507
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAHLCRGRGAVGRREMLRGSGKKPIQRLAKAPAATASSKTSEWRATTAYGFLPAGGDVR CCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCEEEEECEEECCCCCCC PHSPRYESQGVLSDPADLGERFAARDELAEEGKEERFAEPPDRRLGLDVKGAANDIGVEF CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHCCCCCCCCCCCCCEEE IEDDPEAQVCIEAGPPLLDGRNFSRAASLLGLLGGDREKQNQVVIRSGKPHADGDWPILP ECCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCC PLYLSFSGLPRA HHHHCCCCCCCC >Mature Secondary Structure AAHLCRGRGAVGRREMLRGSGKKPIQRLAKAPAATASSKTSEWRATTAYGFLPAGGDVR CCCCCCCCCCCCHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCEEEEECEEECCCCCCC PHSPRYESQGVLSDPADLGERFAARDELAEEGKEERFAEPPDRRLGLDVKGAANDIGVEF CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHCCCCCCCCCCCCCEEE IEDDPEAQVCIEAGPPLLDGRNFSRAASLLGLLGGDREKQNQVVIRSGKPHADGDWPILP ECCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCC PLYLSFSGLPRA HHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424