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Identifier: 16519712

GI number: 16519712

Start: 509178

End: 509792

Strand: Reverse

Name: Not Available

Synonym: NGR_a03940

Alternate gene names: NA

Gene position: 509792-509178 (Counterclockwise)

Preceding gene: 16519711

Following gene: 16519713

Centisome position: 95.08

GC content: 58.05

Gene sequence:

>615_bases
ATGAGGGCCTTGCCAGGCGCTGGGACGGTGTGCGACACGGCTGGTGTGACTGAGAGGTCGCGAGAGAATCGTCACCCGAC
GGGGCGGGGACCGCGGGCGGGCTCCGTGAGCGCAGCGAGTAGAGCCGTGCGCCATAGGCGTCTCGCCCAACATGCTCTTT
CTCATAACATCAGCGATATGAATCGATCCGTGCCCACCGATTCACAAGTGTCGTTGGACGCGATAGTCGGGATCAGCGAT
TCTGATCTCATGATCTCGCAACCCTACCGGCTCTATGTCGAGCGCCTGGATCCCTCGAGGAATATGGCCCGCTACTATGC
CATGTCGATCGAACCGAACCTCTTCGGCGACATCTGCCTGCTTCGCAAGTGGGGTCGCATTGGAACCAAGGGACAGATGA
TGGTCCATCATTTCGGCCAGGAAGAGGATGCGGTCCGATTGTTTCTCGATCTGCTCCGACAGAAACGAAAACGCGGTTAT
CGTCCGCGACCTTCCTTGCCGAAGGAAAAATGGCCCGCCGAAGCGGAGCACGAAAGCGCTACATCCGCGCCGGTTCCAGA
TCCGGAAGGACACTTGGATTTAGATGAAGAACGGAATCTTGATGGCGAGCTTTAG

Upstream 100 bases:

>100_bases
CATTCTCGCTTTCAACCGGGTTACGAGATGAGGACAAGTATGGGCGCAAGCTCCGCACGGTGACACGAGCGGGGCGCTCG
CTGGGGCAGCACGCTCGTTC

Downstream 100 bases:

>100_bases
ACCGAGCTTTCCCTTCCGGAAGGAATGGCTGCTCACCTTTGCCGAGGACGCGGAGCCGTCGGCCGGCGCGAAATGTTGCG
GGGTTCCGGCAAGAAGCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MRALPGAGTVCDTAGVTERSRENRHPTGRGPRAGSVSAASRAVRHRRLAQHALSHNISDMNRSVPTDSQVSLDAIVGISD
SDLMISQPYRLYVERLDPSRNMARYYAMSIEPNLFGDICLLRKWGRIGTKGQMMVHHFGQEEDAVRLFLDLLRQKRKRGY
RPRPSLPKEKWPAEAEHESATSAPVPDPEGHLDLDEERNLDGEL

Sequences:

>Translated_204_residues
MRALPGAGTVCDTAGVTERSRENRHPTGRGPRAGSVSAASRAVRHRRLAQHALSHNISDMNRSVPTDSQVSLDAIVGISD
SDLMISQPYRLYVERLDPSRNMARYYAMSIEPNLFGDICLLRKWGRIGTKGQMMVHHFGQEEDAVRLFLDLLRQKRKRGY
RPRPSLPKEKWPAEAEHESATSAPVPDPEGHLDLDEERNLDGEL
>Mature_204_residues
MRALPGAGTVCDTAGVTERSRENRHPTGRGPRAGSVSAASRAVRHRRLAQHALSHNISDMNRSVPTDSQVSLDAIVGISD
SDLMISQPYRLYVERLDPSRNMARYYAMSIEPNLFGDICLLRKWGRIGTKGQMMVHHFGQEEDAVRLFLDLLRQKRKRGY
RPRPSLPKEKWPAEAEHESATSAPVPDPEGHLDLDEERNLDGEL

Specific function: Unknown

COG id: COG3831

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4DW_RHISN (P55422)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_443832.1
- ProteinModelPortal:   P55422
- SMR:   P55422
- GeneID:   962325
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a03940
- ProtClustDB:   CLSK539790
- InterPro:   IPR008893
- SMART:   SM00773

Pfam domain/function: PF05406 WGR

EC number: NA

Molecular weight: Translated: 22904; Mature: 22904

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRALPGAGTVCDTAGVTERSRENRHPTGRGPRAGSVSAASRAVRHRRLAQHALSHNISDM
CCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHH
NRSVPTDSQVSLDAIVGISDSDLMISQPYRLYVERLDPSRNMARYYAMSIEPNLFGDICL
HCCCCCCCCCCHHHEECCCCCCEEECCCHHHHHHHCCCCHHHHHHEEEECCCCHHHHHHH
LRKWGRIGTKGQMMVHHFGQEEDAVRLFLDLLRQKRKRGYRPRPSLPKEKWPAEAEHESA
HHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCC
TSAPVPDPEGHLDLDEERNLDGEL
CCCCCCCCCCCCCCCHHCCCCCCC
>Mature Secondary Structure
MRALPGAGTVCDTAGVTERSRENRHPTGRGPRAGSVSAASRAVRHRRLAQHALSHNISDM
CCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHH
NRSVPTDSQVSLDAIVGISDSDLMISQPYRLYVERLDPSRNMARYYAMSIEPNLFGDICL
HCCCCCCCCCCHHHEECCCCCCEEECCCHHHHHHHCCCCHHHHHHEEEECCCCHHHHHHH
LRKWGRIGTKGQMMVHHFGQEEDAVRLFLDLLRQKRKRGYRPRPSLPKEKWPAEAEHESA
HHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCC
TSAPVPDPEGHLDLDEERNLDGEL
CCCCCCCCCCCCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424