| Definition | Sinorhizobium fredii NGR234 plasmid pNGR234a, complete sequence. |
|---|---|
| Accession | NC_000914 |
| Length | 536,165 |
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Identifier: 16519703
GI number: 16519703
Start: 520122
End: 520310
Strand: Reverse
Name: Not Available
Synonym: NGR_a04030
Alternate gene names: NA
Gene position: 520310-520122 (Counterclockwise)
Preceding gene: 16519702
Following gene: 16519709
Centisome position: 97.04
GC content: 57.14
Gene sequence:
>189_bases GTGGAGCGAAAGCGACTCGACGCGGAGGATCTCGTCGCCCGCATCACTTGGCAGGCGTTAAGCAAATGCCTTGTTGGAGA GATGTATGTGAATGCGGCGCGCGAGACGTTTTTCCGCACGGCGAAAAACAAGGGCCTCCTTGCCGAACCGGAGATGTCAT TGAGCTCAGTTGGCCGGTTGGCTAAGTGA
Upstream 100 bases:
>100_bases CGGAGGTCATGATGCGGGGATCCTTTAACGACCTGGTCTATGCGCAAAATGGCCGCACTCTCGTGAAGGAAATCTGTTCC GTGAGCAAGCGATCGTCTTC
Downstream 100 bases:
>100_bases CTGAGCTTCCGCTTCCAGGAACGCGGACGGCACGTGCCTTGGAGCGGGCTCATCCACGCCTGGTCGATCAAGATCGTTTA CGACAGCACTGGAGCGGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 62; Mature: 62
Protein sequence:
>62_residues MERKRLDAEDLVARITWQALSKCLVGEMYVNAARETFFRTAKNKGLLAEPEMSLSSVGRLAK
Sequences:
>Translated_62_residues MERKRLDAEDLVARITWQALSKCLVGEMYVNAARETFFRTAKNKGLLAEPEMSLSSVGRLAK >Mature_62_residues MERKRLDAEDLVARITWQALSKCLVGEMYVNAARETFFRTAKNKGLLAEPEMSLSSVGRLAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y4DN_RHISN (P55413)
Other databases:
- EMBL: U00090 - RefSeq: NP_443823.1 - GeneID: 962340 - GenomeReviews: U00090_GR - KEGG: rhi:NGR_a04030
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7001; Mature: 7001
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERKRLDAEDLVARITWQALSKCLVGEMYVNAARETFFRTAKNKGLLAEPEMSLSSVGRL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCC AK CC >Mature Secondary Structure MERKRLDAEDLVARITWQALSKCLVGEMYVNAARETFFRTAKNKGLLAEPEMSLSSVGRL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCC AK CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424