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The map label for this gene is trbL

Identifier: 16519692

GI number: 16519692

Start: 528577

End: 529752

Strand: Reverse

Name: trbL

Synonym: NGR_a04140

Alternate gene names: 16519692

Gene position: 529752-528577 (Counterclockwise)

Preceding gene: 16519691

Following gene: 16519693

Centisome position: 98.8

GC content: 61.31

Gene sequence:

>1176_bases
ATGGTGAAGATCAGTCTTGCACGTTCGTTGCTGATTGCAGGCTTGGCTTATGTCGCCTTCGAGGCACGCGCTTTCGCGCA
GGAAGGTCTAGTCCTCACGGAGTTGGAGAACCACGTCTCGGCAGCCGCGAAAGGATGGGAAACCACCATCCTTGACGCGG
CGAAATCGTTGTTTTGGATTTTGGCCACCATCGAGATCGGCATCGCGGCCGTCTGGCTGGCGCTCCAGGCGGCTTCGCTC
GACAGCTGGTTTGCTGAGCTTGTCCGGCGGATCATGTTCGTCGGATTTTTTGCTTTCGTTCTGACGCAGGGCCCGACCTT
CGCGCGCGCCGTGATCGATAGCCTGTTCCAGATCGGCGCTGGCGGCGGATCGGCATCCCCCGCTGAAATCTTCGACGCTG
GCATTCGGGTCGCCTCACAAATGTCGCAGCAAGCCCAGTTCGGCGTCTTCGAGGACAATGCGCTCGCAATCGCTGCGGTG
CTGGCGATGGGTGTCGTGGTCATCTGCTTTTCGCTGGTTGCAGCAATTTTCGTGTCGGTCATGGTCGAGATGTATGTCGG
CCTGCTCGCTGGCATGATCATGCTTGGGCTTGGCGGTTCCTCTTTCACGAAAGACTTCGCTGTCCGATATCTTGTCTATG
CCTTCGGCGTCGGCATGAAACTGATGGCGCTCGTGATGATAGCTAAGATTGGATCGCAGGTCCTCTTGGGCCTGGCGAAT
GCTCCAACCGCGTCTTCCGACCAATTTGTCACGACCCTGGCGATCGCCGGCATCTCCGTCGTGGTTTTCATCATCGCCAT
GTACGTGCCGAGCATCATCCAAGGTGTAGTGCAAGGCGCCTCGGTTTCCGGGGGGATGGAAACGATCCGTCACGGCGGCC
AGGCGGCATCCTTCGCCGCCGGCGCTGGGTTCCTCGCGGGCGGCGCCGCGAGAACGGGTTTCACGGCCGGTCAGTCGGCA
CGAGCGGCGGGTTCATCCCTCGCCGGCGCGGCGCTTCGGGGTTTCGGCGCGGGGATCGGATCCGCCAGCAGTGCTGCTGG
TTCTGCCGCCAAGGAAAAGGCGATCGGTTCACCCGGCGCCTATGCCGGATCAATCCTCGGCCTCGCCAACGCCAAGCTCG
ATGAGAGCCGGGGCGGTCATAGCGGGCACAAGCCACCTCCCGAACGCAAAGACTAA

Upstream 100 bases:

>100_bases
ACCCATCCGCACCTGAGGAGCAACGCACCGCCAAAGAAAAATTCTTCGGCGCGGGGAAGGCGCTTCCGCCGATCAAGGAT
GGTCAGGAGATGGGTCCAAG

Downstream 100 bases:

>100_bases
CAGCAATCAGAAAGTGATAGACGATGGCAGCGAACCGCGCCCCCGAAAACCCCTATCTTGCCGCGCGGCAGGAATGGACG
GAACGATACGGATCCTATGT

Product: conjugal transfer protein TrbL

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 391

Protein sequence:

>391_residues
MVKISLARSLLIAGLAYVAFEARAFAQEGLVLTELENHVSAAAKGWETTILDAAKSLFWILATIEIGIAAVWLALQAASL
DSWFAELVRRIMFVGFFAFVLTQGPTFARAVIDSLFQIGAGGGSASPAEIFDAGIRVASQMSQQAQFGVFEDNALAIAAV
LAMGVVVICFSLVAAIFVSVMVEMYVGLLAGMIMLGLGGSSFTKDFAVRYLVYAFGVGMKLMALVMIAKIGSQVLLGLAN
APTASSDQFVTTLAIAGISVVVFIIAMYVPSIIQGVVQGASVSGGMETIRHGGQAASFAAGAGFLAGGAARTGFTAGQSA
RAAGSSLAGAALRGFGAGIGSASSAAGSAAKEKAIGSPGAYAGSILGLANAKLDESRGGHSGHKPPPERKD

Sequences:

>Translated_391_residues
MVKISLARSLLIAGLAYVAFEARAFAQEGLVLTELENHVSAAAKGWETTILDAAKSLFWILATIEIGIAAVWLALQAASL
DSWFAELVRRIMFVGFFAFVLTQGPTFARAVIDSLFQIGAGGGSASPAEIFDAGIRVASQMSQQAQFGVFEDNALAIAAV
LAMGVVVICFSLVAAIFVSVMVEMYVGLLAGMIMLGLGGSSFTKDFAVRYLVYAFGVGMKLMALVMIAKIGSQVLLGLAN
APTASSDQFVTTLAIAGISVVVFIIAMYVPSIIQGVVQGASVSGGMETIRHGGQAASFAAGAGFLAGGAARTGFTAGQSA
RAAGSSLAGAALRGFGAGIGSASSAAGSAAKEKAIGSPGAYAGSILGLANAKLDESRGGHSGHKPPPERKD
>Mature_391_residues
MVKISLARSLLIAGLAYVAFEARAFAQEGLVLTELENHVSAAAKGWETTILDAAKSLFWILATIEIGIAAVWLALQAASL
DSWFAELVRRIMFVGFFAFVLTQGPTFARAVIDSLFQIGAGGGSASPAEIFDAGIRVASQMSQQAQFGVFEDNALAIAAV
LAMGVVVICFSLVAAIFVSVMVEMYVGLLAGMIMLGLGGSSFTKDFAVRYLVYAFGVGMKLMALVMIAKIGSQVLLGLAN
APTASSDQFVTTLAIAGISVVVFIIAMYVPSIIQGVVQGASVSGGMETIRHGGQAASFAAGAGFLAGGAARTGFTAGQSA
RAAGSSLAGAALRGFGAGIGSASSAAGSAAKEKAIGSPGAYAGSILGLANAKLDESRGGHSGHKPPPERKD

Specific function: Unknown

COG id: COG3846

COG function: function code U; Type IV secretory pathway, TrbL components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbL/virB6 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): TRBL_RHISN (P55402)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_443812.1
- GeneID:   962184
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a04140
- HOGENOM:   HBG300408
- ProtClustDB:   PRK13841
- InterPro:   IPR014150
- InterPro:   IPR007688
- TIGRFAMs:   TIGR02783

Pfam domain/function: PF04610 TrbL

EC number: NA

Molecular weight: Translated: 39716; Mature: 39716

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x9727988)-; HASH(0x96966d4)-; HASH(0xbe9d49c)-; HASH(0xc658094)-; HASH(0x95ee3d0)-; HASH(0xbb1cbd4)-; HASH(0xbbf45b8)-; HASH(0xad1babc)-; HASH(0xb803e6c)-; HASH(0xc2cf6b4)-;

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCH
>Mature Secondary Structure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HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424